RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 RIF1Q5UIP0 2472 aaKnown RBP12.23□□□□□ -0.45
CNTNAP3B-214ENST00000618777 EIF4EBP1Q13541 118 aaPredicted RBP12.23□□□□□ -0.45
CNTNAP3B-214ENST00000618777 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.22□□□□□ -0.45
CNTNAP3B-214ENST00000618777 NANOS2P60321 138 aaKnown RBP12.22□□□□□ -0.45
CNTNAP3B-214ENST00000618777 FAM19A1Q7Z5A9 133 aa12.22□□□□□ -0.45
CNTNAP3B-214ENST00000618777 TMEM254Q8TBM7 123 aa12.22□□□□□ -0.45
CNTNAP3B-214ENST00000618777 A0A096LNI7 61 aa12.21□□□□□ -0.45
CNTNAP3B-214ENST00000618777 PLAC8L1A1L4L8 177 aa12.21□□□□□ -0.45
CNTNAP3B-214ENST00000618777 MAP6D1Q9H9H5 199 aa12.21□□□□□ -0.45
CNTNAP3B-214ENST00000618777 TSHBP01222 138 aa12.21□□□□□ -0.45
CNTNAP3B-214ENST00000618777 XAGE1AQ9HD64 81 aa12.21□□□□□ -0.46
CNTNAP3B-214ENST00000618777 F8W735 103 aaPredicted RBP12.21□□□□□ -0.46
CNTNAP3B-214ENST00000618777 Q8N3U1 123 aa12.2□□□□□ -0.46
CNTNAP3B-214ENST00000618777 POLR2KP53803 58 aaKnown RBP12.2□□□□□ -0.46
CNTNAP3B-214ENST00000618777 DHRS4-AS1Q9P1J3 65 aa12.2□□□□□ -0.46
CNTNAP3B-214ENST00000618777 CELA1Q9UNI1 258 aa12.2□□□□□ -0.46
CNTNAP3B-214ENST00000618777 PCDH15Q96QU1 1955 aa12.2□□□□□ -0.46
CNTNAP3B-214ENST00000618777 ZSWIM8A7E2V4 1837 aa12.2□□□□□ -0.46
CNTNAP3B-214ENST00000618777 PRO0461Q9UI25 63 aa12.2□□□□□ -0.46
CNTNAP3B-214ENST00000618777 Q8N6K4 173 aa12.2□□□□□ -0.46
CNTNAP3B-214ENST00000618777 DCANP1Q8TF63 244 aa12.19□□□□□ -0.46
CNTNAP3B-214ENST00000618777 IGF1P05019 195 aa12.19□□□□□ -0.46
CNTNAP3B-214ENST00000618777 IGHV4-61A0A0C4DH41 118 aa12.19□□□□□ -0.46
CNTNAP3B-214ENST00000618777 SMCPP49901 116 aaPredicted RBP12.19□□□□□ -0.46
CNTNAP3B-214ENST00000618777 POM121L12Q8N7R1 296 aa12.18□□□□□ -0.46
CNTNAP3B-214ENST00000618777 TRBV6-8A0A0A6YYG3 113 aa12.18□□□□□ -0.46
CNTNAP3B-214ENST00000618777 K7EQG2 157 aa12.17□□□□□ -0.46
CNTNAP3B-214ENST00000618777 DEFB135Q30KP9 77 aa12.17□□□□□ -0.46
CNTNAP3B-214ENST00000618777 C4orf3Q8WVX3 66 aa12.17□□□□□ -0.46
CNTNAP3B-214ENST00000618777 IGKV2-24A0A0C4DH68 120 aa12.17□□□□□ -0.46
CNTNAP3B-214ENST00000618777 LINC00208Q96KT6 92 aa12.17□□□□□ -0.46
CNTNAP3B-214ENST00000618777 M0R378 163 aa12.16□□□□□ -0.46
CNTNAP3B-214ENST00000618777 CNFNQ9BYD5 112 aa12.16□□□□□ -0.46
CNTNAP3B-214ENST00000618777 C14orf177Q52M58 125 aa12.16□□□□□ -0.46
CNTNAP3B-214ENST00000618777 RPL28P46779 137 aaKnown RBP12.16□□□□□ -0.46
CNTNAP3B-214ENST00000618777 UBE2D4Q9Y2X8 147 aa12.16□□□□□ -0.46
CNTNAP3B-214ENST00000618777 GPR179Q6PRD1 2367 aa12.15□□□□□ -0.46
CNTNAP3B-214ENST00000618777 MUC7Q8TAX7 377 aa12.15□□□□□ -0.46
CNTNAP3B-214ENST00000618777 CRIP3Q6Q6R5 217 aa12.15□□□□□ -0.46
CNTNAP3B-214ENST00000618777 CD164Q04900 197 aa12.15□□□□□ -0.46
CNTNAP3B-214ENST00000618777 TANC2Q9HCD6 1990 aa12.15□□□□□ -0.47
CNTNAP3B-214ENST00000618777 TRBV6-4A0A1B0GX49 114 aa12.14□□□□□ -0.47
CNTNAP3B-214ENST00000618777 DEFB4AO15263 64 aa12.14□□□□□ -0.47
CNTNAP3B-214ENST00000618777 LINC00846Q9NV44 126 aa12.14□□□□□ -0.47
CNTNAP3B-214ENST00000618777 SMAD5-AS1Q9Y6J3 95 aa12.14□□□□□ -0.47
CNTNAP3B-214ENST00000618777 IGIPA6NJ69 53 aa12.14□□□□□ -0.47
CNTNAP3B-214ENST00000618777 COX17Q14061 63 aa12.14□□□□□ -0.47
CNTNAP3B-214ENST00000618777 GAS8-AS1O95177 125 aa12.13□□□□□ -0.47
CNTNAP3B-214ENST00000618777 CXCL6P80162 114 aa12.13□□□□□ -0.47
CNTNAP3B-214ENST00000618777 LIMD2Q9BT23 127 aa12.13□□□□□ -0.47
CNTNAP3B-214ENST00000618777 A0A096LNJ9 63 aa12.12□□□□□ -0.47
CNTNAP3B-214ENST00000618777 ZNF73O43830 326 aaPredicted RBP12.12□□□□□ -0.47
CNTNAP3B-214ENST00000618777 RNASE3P12724 160 aaKnown RBP12.12□□□□□ -0.47
CNTNAP3B-214ENST00000618777 CD164L2Q6UWJ8 174 aa12.12□□□□□ -0.47
CNTNAP3B-214ENST00000618777 ARHGAP32A7KAX9 2087 aa12.12□□□□□ -0.47
CNTNAP3B-214ENST00000618777 TANC1Q9C0D5 1861 aa12.12□□□□□ -0.47
CNTNAP3B-214ENST00000618777 HILS1P60008 231 aa12.11□□□□□ -0.47
CNTNAP3B-214ENST00000618777 TRBV10-3A0A0K0K1G6 114 aa12.11□□□□□ -0.47
CNTNAP3B-214ENST00000618777 FRMPD3Q5JV73 1810 aa12.11□□□□□ -0.47
CNTNAP3B-214ENST00000618777 ZFP36P26651 326 aaKnown RBP12.11□□□□□ -0.47
CNTNAP3B-214ENST00000618777 IGFL2Q6UWQ7 119 aa12.11□□□□□ -0.47
CNTNAP3B-214ENST00000618777 C1orf229Q6ZS94 237 aaPredicted RBP12.11□□□□□ -0.47
CNTNAP3B-214ENST00000618777 A6NDX4 124 aa12.1□□□□□ -0.47
CNTNAP3B-214ENST00000618777 GRNP28799 593 aaKnown RBP12.1□□□□□ -0.47
CNTNAP3B-214ENST00000618777 SORL1Q92673 2214 aa12.1□□□□□ -0.47
CNTNAP3B-214ENST00000618777 Q8N814 137 aa12.1□□□□□ -0.47
CNTNAP3B-214ENST00000618777 SYCNQ0VAF6 134 aa12.1□□□□□ -0.47
CNTNAP3B-214ENST00000618777 PRR14LQ5THK1 2151 aa12.1□□□□□ -0.47
CNTNAP3B-214ENST00000618777 PROK1P58294 105 aa12.1□□□□□ -0.47
CNTNAP3B-214ENST00000618777 SRCAPQ6ZRS2 3230 aa12.09□□□□□ -0.47
CNTNAP3B-214ENST00000618777 C11orf21Q9P2W6 132 aa12.09□□□□□ -0.47
CNTNAP3B-214ENST00000618777 ODF3BA8MYP8 253 aa12.09□□□□□ -0.47
CNTNAP3B-214ENST00000618777 EDN2P20800 178 aa12.09□□□□□ -0.47
CNTNAP3B-214ENST00000618777 BCE1O60756 84 aa12.09□□□□□ -0.47
CNTNAP3B-214ENST00000618777 MSMPQ1L6U9 139 aa12.08□□□□□ -0.48
CNTNAP3B-214ENST00000618777 Q6ZSV7 163 aa12.08□□□□□ -0.48
CNTNAP3B-214ENST00000618777 BEAN1Q3B7T3 259 aa12.08□□□□□ -0.48
CNTNAP3B-214ENST00000618777 A0A087WZ39 114 aa12.07□□□□□ -0.48
CNTNAP3B-214ENST00000618777 TSPEAR-AS2P59090 65 aa12.07□□□□□ -0.48
CNTNAP3B-214ENST00000618777 TICRRQ7Z2Z1 1910 aa12.07□□□□□ -0.48
CNTNAP3B-214ENST00000618777 IGKV2-28A0A075B6P5 120 aa12.07□□□□□ -0.48
CNTNAP3B-214ENST00000618777 IGKV2D-28P01615 120 aa12.07□□□□□ -0.48
CNTNAP3B-214ENST00000618777 NCOA6Q14686 2063 aaPredicted RBP12.07□□□□□ -0.48
CNTNAP3B-214ENST00000618777 WIPF1O43516 503 aa12.06□□□□□ -0.48
CNTNAP3B-214ENST00000618777 CRYGDP07320 174 aa12.06□□□□□ -0.48
CNTNAP3B-214ENST00000618777 Q8IZM0 81 aa12.06□□□□□ -0.48
CNTNAP3B-214ENST00000618777 FAM19A4Q96LR4 140 aa12.06□□□□□ -0.48
CNTNAP3B-214ENST00000618777 IGLV4-69A0A075B6H9 119 aa12.06□□□□□ -0.48
CNTNAP3B-214ENST00000618777 LINC00959A0A1B0GUT2 108 aa12.06□□□□□ -0.48
CNTNAP3B-214ENST00000618777 HCFC1P51610 2035 aa12.05□□□□□ -0.48
CNTNAP3B-214ENST00000618777 LINC01548A6NM66 108 aa12.04□□□□□ -0.48
CNTNAP3B-214ENST00000618777 IGHV4-30-4P0DP06 118 aa12.04□□□□□ -0.48
CNTNAP3B-214ENST00000618777 IGHV4-31P0DP07 118 aa12.04□□□□□ -0.48
CNTNAP3B-214ENST00000618777 LINC00336Q6ZUF6 198 aa12.04□□□□□ -0.48
CNTNAP3B-214ENST00000618777 SBSPONQ8IVN8 264 aa12.04□□□□□ -0.48
CNTNAP3B-214ENST00000618777 C2CD3Q4AC94 2353 aa12.04□□□□□ -0.48
CNTNAP3B-214ENST00000618777 A0A087WYN8 130 aa12.04□□□□□ -0.48
CNTNAP3B-214ENST00000618777 LY6LH3BQJ8 138 aa12.04□□□□□ -0.48
CNTNAP3B-214ENST00000618777 KLLNB2CW77 178 aa12.03□□□□□ -0.48
CNTNAP3B-214ENST00000618777 DENND4CQ5VZ89 1909 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms