RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 NRACQ8N912 160 aa14.04□□□□□ -0.16
TRAF4-217ENST00000618771 VCYO14598 125 aa14.03□□□□□ -0.16
TRAF4-217ENST00000618771 FAM104BQ5XKR9 115 aa14.03□□□□□ -0.16
TRAF4-217ENST00000618771 IGHV3-64A0A075B6Q5 118 aa14.02□□□□□ -0.17
TRAF4-217ENST00000618771 A0A1B0GW15 77 aa14.02□□□□□ -0.17
TRAF4-217ENST00000618771 FCER1GP30273 86 aa14.02□□□□□ -0.17
TRAF4-217ENST00000618771 MRPL51Q4U2R6 128 aaKnown RBP14.02□□□□□ -0.17
TRAF4-217ENST00000618771 MRPL52Q86TS9 123 aaKnown RBP14.02□□□□□ -0.17
TRAF4-217ENST00000618771 PANO1I0J062 215 aa14.01□□□□□ -0.17
TRAF4-217ENST00000618771 PPP1R2P9O14990 202 aa14.01□□□□□ -0.17
TRAF4-217ENST00000618771 KRTAP10-4P60372 401 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-217ENST00000618771 HIGD2BQ4VC39 106 aa14.01□□□□□ -0.17
TRAF4-217ENST00000618771 LINC00959A0A1B0GUT2 108 aa14□□□□□ -0.17
TRAF4-217ENST00000618771 XCL1P47992 114 aa14□□□□□ -0.17
TRAF4-217ENST00000618771 FOXI1Q12951 378 aa14□□□□□ -0.17
TRAF4-217ENST00000618771 KIR2DL4Q99706 377 aa14□□□□□ -0.17
TRAF4-217ENST00000618771 CDC42SE2Q9NRR3 84 aa14□□□□□ -0.17
TRAF4-217ENST00000618771 LINC00862A6NCI5 91 aa13.99□□□□□ -0.17
TRAF4-217ENST00000618771 GVQW2A0A096LPI5 108 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-217ENST00000618771 CCL25O15444 150 aa13.98□□□□□ -0.17
TRAF4-217ENST00000618771 S100A8P05109 93 aa13.98□□□□□ -0.17
TRAF4-217ENST00000618771 HBBP68871 147 aa13.98□□□□□ -0.17
TRAF4-217ENST00000618771 CIRBPQ14011 172 aaKnown RBP13.98□□□□□ -0.17
TRAF4-217ENST00000618771 MRPL54Q6P161 138 aaKnown RBP13.98□□□□□ -0.17
TRAF4-217ENST00000618771 ZNF664Q8N3J9 261 aa13.98□□□□□ -0.17
TRAF4-217ENST00000618771 LRP1Q07954 4544 aaKnown RBP13.97□□□□□ -0.17
TRAF4-217ENST00000618771 CKS2P33552 79 aa13.97□□□□□ -0.17
TRAF4-217ENST00000618771 SS18Q15532 418 aa13.97□□□□□ -0.17
TRAF4-217ENST00000618771 RPL37AP61513 92 aaKnown RBP13.96□□□□□ -0.17
TRAF4-217ENST00000618771 SMAGPQ0VAQ4 97 aa13.96□□□□□ -0.17
TRAF4-217ENST00000618771 C20orf78Q9BR46 151 aa13.96□□□□□ -0.17
TRAF4-217ENST00000618771 TRBV24-1A0A075B6N3 115 aa13.95□□□□□ -0.18
TRAF4-217ENST00000618771 A0A1B0GXF2 115 aa13.95□□□□□ -0.18
TRAF4-217ENST00000618771 F8W036 122 aa13.95□□□□□ -0.18
TRAF4-217ENST00000618771 CHTF8P0CG12 524 aa13.95□□□□□ -0.18
TRAF4-217ENST00000618771 CSDC2Q9Y534 153 aaKnown RBP13.95□□□□□ -0.18
TRAF4-217ENST00000618771 HMCN2Q8NDA2 5059 aa13.95□□□□□ -0.18
TRAF4-217ENST00000618771 RAB14P61106 215 aa13.94□□□□□ -0.18
TRAF4-217ENST00000618771 SERTAD4-AS1Q5TG53 156 aa13.94□□□□□ -0.18
TRAF4-217ENST00000618771 DPH3Q96FX2 82 aa13.94□□□□□ -0.18
TRAF4-217ENST00000618771 UBE2D4Q9Y2X8 147 aa13.94□□□□□ -0.18
TRAF4-217ENST00000618771 IGHV1-58A0A0C4DH39 117 aa13.93□□□□□ -0.18
TRAF4-217ENST00000618771 D6R8Y8 96 aa13.93□□□□□ -0.18
TRAF4-217ENST00000618771 TNFRSF6BO95407 300 aa13.93□□□□□ -0.18
TRAF4-217ENST00000618771 RPL32P62910 135 aaKnown RBP13.93□□□□□ -0.18
TRAF4-217ENST00000618771 CD164L2Q6UWJ8 174 aa13.93□□□□□ -0.18
TRAF4-217ENST00000618771 SPACA4Q8TDM5 124 aa13.93□□□□□ -0.18
TRAF4-217ENST00000618771 COX6A2Q02221 97 aa13.92□□□□□ -0.18
TRAF4-217ENST00000618771 TMEM18Q96B42 140 aa13.92□□□□□ -0.18
TRAF4-217ENST00000618771 A0A087WYN8 130 aa13.91□□□□□ -0.18
TRAF4-217ENST00000618771 ATP5L2Q7Z4Y8 100 aa13.91□□□□□ -0.18
TRAF4-217ENST00000618771 SMIM2Q9BVW6 85 aa13.91□□□□□ -0.18
TRAF4-217ENST00000618771 UBR4Q5T4S7 5183 aa13.9□□□□□ -0.18
TRAF4-217ENST00000618771 C1orf196B1AJZ1 125 aa13.9□□□□□ -0.18
TRAF4-217ENST00000618771 TCAPO15273 167 aa13.9□□□□□ -0.18
TRAF4-217ENST00000618771 NPYP01303 97 aa13.9□□□□□ -0.18
TRAF4-217ENST00000618771 PNRC1Q12796 327 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-217ENST00000618771 RNASE13Q5GAN3 156 aaKnown RBP13.9□□□□□ -0.18
TRAF4-217ENST00000618771 TIMM21Q9BVV7 248 aa13.9□□□□□ -0.18
TRAF4-217ENST00000618771 FAT3Q8TDW7 4589 aa13.9□□□□□ -0.19
TRAF4-217ENST00000618771 PPBPP02775 128 aa13.89□□□□□ -0.19
TRAF4-217ENST00000618771 Q6ZUT4 128 aa13.89□□□□□ -0.19
TRAF4-217ENST00000618771 PRSS3P2Q8NHM4 247 aa13.89□□□□□ -0.19
TRAF4-217ENST00000618771 PHOX2AO14813 284 aa13.88□□□□□ -0.19
TRAF4-217ENST00000618771 LINC00526Q96FQ7 95 aa13.88□□□□□ -0.19
TRAF4-217ENST00000618771 TRAV13-1A0A0B4J241 112 aa13.87□□□□□ -0.19
TRAF4-217ENST00000618771 ORMDL3Q8N138 153 aa13.87□□□□□ -0.19
TRAF4-217ENST00000618771 IGKV2-24A0A0C4DH68 120 aa13.86□□□□□ -0.19
TRAF4-217ENST00000618771 ZNF561-AS1K7EIQ3 104 aa13.86□□□□□ -0.19
TRAF4-217ENST00000618771 MT-ND4LP03901 98 aa13.86□□□□□ -0.19
TRAF4-217ENST00000618771 RPL39P62891 51 aaKnown RBP13.86□□□□□ -0.19
TRAF4-217ENST00000618771 CARD19Q96LW7 228 aa13.86□□□□□ -0.19
TRAF4-217ENST00000618771 PLAC8Q9NZF1 115 aa13.86□□□□□ -0.19
TRAF4-217ENST00000618771 COX7A2LO14548 114 aa13.85□□□□□ -0.19
TRAF4-217ENST00000618771 MALP21145 153 aa13.85□□□□□ -0.19
TRAF4-217ENST00000618771 MAJINQ3KP22 176 aa13.85□□□□□ -0.19
TRAF4-217ENST00000618771 ANAPC16Q96DE5 110 aa13.85□□□□□ -0.19
TRAF4-217ENST00000618771 OXTP01178 125 aa13.84□□□□□ -0.19
TRAF4-217ENST00000618771 HNRNPA3P51991 378 aaKnown RBP13.84□□□□□ -0.19
TRAF4-217ENST00000618771 TMEM136Q6ZRR5 245 aa13.84□□□□□ -0.19
TRAF4-217ENST00000618771 PRELID3AQ96N28 172 aa13.84□□□□□ -0.19
TRAF4-217ENST00000618771 PKIGQ9Y2B9 76 aa13.84□□□□□ -0.19
TRAF4-217ENST00000618771 A0A096LNI7 61 aa13.83□□□□□ -0.2
TRAF4-217ENST00000618771 SPANXA1Q9NS26 97 aa13.83□□□□□ -0.2
TRAF4-217ENST00000618771 SYCNQ0VAF6 134 aa13.82□□□□□ -0.2
TRAF4-217ENST00000618771 CLLU1Q5K131 121 aa13.82□□□□□ -0.2
TRAF4-217ENST00000618771 PLA2G2DQ9UNK4 145 aa13.82□□□□□ -0.2
TRAF4-217ENST00000618771 FAM104AQ969W3 186 aa13.81□□□□□ -0.2
TRAF4-217ENST00000618771 PKHD1L1Q86WI1 4243 aa13.8□□□□□ -0.2
TRAF4-217ENST00000618771 IGLV4-69A0A075B6H9 119 aa13.8□□□□□ -0.2
TRAF4-217ENST00000618771 RAB5AP20339 215 aa13.8□□□□□ -0.2
TRAF4-217ENST00000618771 C5orf38Q86SI9 138 aa13.8□□□□□ -0.2
TRAF4-217ENST00000618771 STPG4Q8N801 248 aa13.8□□□□□ -0.2
TRAF4-217ENST00000618771 C7orf33Q8WU49 177 aa13.8□□□□□ -0.2
TRAF4-217ENST00000618771 LINC00474Q9P2X8 69 aa13.8□□□□□ -0.2
TRAF4-217ENST00000618771 MRPS36P82909 103 aaKnown RBP13.79□□□□□ -0.2
TRAF4-217ENST00000618771 OPRPNQ99935 248 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-217ENST00000618771 APOMO95445 188 aa13.78□□□□□ -0.2
TRAF4-217ENST00000618771 LAMTOR2Q9Y2Q5 125 aa13.78□□□□□ -0.2
TRAF4-217ENST00000618771 PRSS47A8MTI9 375 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms