RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 APCSP02743 223 aa16.38■□□□□ 0.21
PMS1-220ENST00000618056 S100A8P05109 93 aa16.38■□□□□ 0.21
PMS1-220ENST00000618056 HIST3H2BBQ8N257 126 aa16.38■□□□□ 0.21
PMS1-220ENST00000618056 TMEM70Q9BUB7 260 aa16.38■□□□□ 0.21
PMS1-220ENST00000618056 CAMPP49913 170 aa16.37■□□□□ 0.21
PMS1-220ENST00000618056 REG3AQ06141 175 aa16.37■□□□□ 0.21
PMS1-220ENST00000618056 CLPSL2Q6UWE3 100 aa16.37■□□□□ 0.21
PMS1-220ENST00000618056 S100A2P29034 98 aa16.36■□□□□ 0.21
PMS1-220ENST00000618056 KRTAP17-1Q9BYP8 105 aa16.36■□□□□ 0.21
PMS1-220ENST00000618056 H7C423 109 aa16.35■□□□□ 0.21
PMS1-220ENST00000618056 PMCHP20382 165 aa16.35■□□□□ 0.21
PMS1-220ENST00000618056 POLR2KP53803 58 aaKnown RBP16.35■□□□□ 0.21
PMS1-220ENST00000618056 FAM104BQ5XKR9 115 aa16.35■□□□□ 0.21
PMS1-220ENST00000618056 TRBV27A0A0K0K1C4 114 aa16.35■□□□□ 0.21
PMS1-220ENST00000618056 PPP1R17O96001 155 aa16.35■□□□□ 0.21
PMS1-220ENST00000618056 KRTAP26-1Q6PEX3 210 aa16.35■□□□□ 0.21
PMS1-220ENST00000618056 ABCA13Q86UQ4 5058 aa16.34■□□□□ 0.21
PMS1-220ENST00000618056 TRAV8-4A0A0B4J246 113 aa16.34■□□□□ 0.21
PMS1-220ENST00000618056 XGP55808 180 aa16.34■□□□□ 0.21
PMS1-220ENST00000618056 PDZD11Q5EBL8 140 aa16.34■□□□□ 0.21
PMS1-220ENST00000618056 DNAH8Q96JB1 4490 aa16.33■□□□□ 0.2
PMS1-220ENST00000618056 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.33■□□□□ 0.2
PMS1-220ENST00000618056 C14orf177Q52M58 125 aa16.33■□□□□ 0.2
PMS1-220ENST00000618056 IFITM10A6NMD0 228 aa16.32■□□□□ 0.2
PMS1-220ENST00000618056 SMKR1H3BMG3 65 aa16.32■□□□□ 0.2
PMS1-220ENST00000618056 TSHBP01222 138 aa16.32■□□□□ 0.2
PMS1-220ENST00000618056 MRPL51Q4U2R6 128 aaKnown RBP16.32■□□□□ 0.2
PMS1-220ENST00000618056 Q8N1X5 172 aa16.32■□□□□ 0.2
PMS1-220ENST00000618056 NRACQ8N912 160 aa16.32■□□□□ 0.2
PMS1-220ENST00000618056 KIAA1644Q3SXP7 199 aa16.31■□□□□ 0.2
PMS1-220ENST00000618056 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.3■□□□□ 0.2
PMS1-220ENST00000618056 IGKV2-29A2NJV5 120 aaPredicted RBP16.3■□□□□ 0.2
PMS1-220ENST00000618056 ESDP10768 282 aa16.3■□□□□ 0.2
PMS1-220ENST00000618056 AMMECR1LQ6DCA0 310 aa16.3■□□□□ 0.2
PMS1-220ENST00000618056 KRTAP4-5Q9BYR2 181 aa16.3■□□□□ 0.2
PMS1-220ENST00000618056 USP17L23D6RBM5 183 aa16.29■□□□□ 0.2
PMS1-220ENST00000618056 VCYO14598 125 aa16.29■□□□□ 0.2
PMS1-220ENST00000618056 FGF6P10767 208 aa16.29■□□□□ 0.2
PMS1-220ENST00000618056 SUMO2P61956 95 aaKnown RBP16.29■□□□□ 0.2
PMS1-220ENST00000618056 BAGE3Q86Y29 109 aa16.29■□□□□ 0.2
PMS1-220ENST00000618056 LINC00518Q8N0U6 118 aa16.29■□□□□ 0.2
PMS1-220ENST00000618056 IGLV10-54A0A075B6I4 117 aa16.28■□□□□ 0.2
PMS1-220ENST00000618056 SMIM6P0DI80 62 aa16.28■□□□□ 0.2
PMS1-220ENST00000618056 FABP4P15090 132 aa16.28■□□□□ 0.2
PMS1-220ENST00000618056 ZNF25P17030 456 aaPredicted RBP16.28■□□□□ 0.2
PMS1-220ENST00000618056 RNASEKQ6P5S7 137 aaKnown RBP16.27■□□□□ 0.19
PMS1-220ENST00000618056 HIST1H2BLQ99880 126 aa16.27■□□□□ 0.19
PMS1-220ENST00000618056 CKS2P33552 79 aa16.25■□□□□ 0.19
PMS1-220ENST00000618056 OR10D4PQ8NGN7 298 aa16.25■□□□□ 0.19
PMS1-220ENST00000618056 TMEM18Q96B42 140 aa16.25■□□□□ 0.19
PMS1-220ENST00000618056 PACRGQ96M98 296 aaPredicted RBP16.25■□□□□ 0.19
PMS1-220ENST00000618056 C20orf78Q9BR46 151 aa16.25■□□□□ 0.19
PMS1-220ENST00000618056 SERF1AO75920 110 aa16.23■□□□□ 0.19
PMS1-220ENST00000618056 RPL32P62910 135 aaKnown RBP16.23■□□□□ 0.19
PMS1-220ENST00000618056 Q6ZSA8 131 aa16.23■□□□□ 0.19
PMS1-220ENST00000618056 ALKBH7Q9BT30 221 aaPredicted RBP16.23■□□□□ 0.19
PMS1-220ENST00000618056 FAM30AQ9NZY2 134 aa16.23■□□□□ 0.19
PMS1-220ENST00000618056 MRPL52Q86TS9 123 aaKnown RBP16.22■□□□□ 0.19
PMS1-220ENST00000618056 C12orf57Q99622 126 aa16.22■□□□□ 0.19
PMS1-220ENST00000618056 KIR2DL4Q99706 377 aa16.22■□□□□ 0.19
PMS1-220ENST00000618056 FAT1Q14517 4588 aa16.22■□□□□ 0.19
PMS1-220ENST00000618056 D6R8Y8 96 aa16.22■□□□□ 0.19
PMS1-220ENST00000618056 PRSS1P07477 247 aa16.22■□□□□ 0.19
PMS1-220ENST00000618056 FCER1GP30273 86 aa16.22■□□□□ 0.19
PMS1-220ENST00000618056 C18orf32Q8TCD1 76 aa16.22■□□□□ 0.19
PMS1-220ENST00000618056 TMEM101Q96IK0 257 aa16.22■□□□□ 0.19
PMS1-220ENST00000618056 TNFRSF6BO95407 300 aa16.21■□□□□ 0.19
PMS1-220ENST00000618056 PPBPP02775 128 aa16.21■□□□□ 0.19
PMS1-220ENST00000618056 LINC00310P59036 64 aa16.2■□□□□ 0.18
PMS1-220ENST00000618056 LINC01620Q4KN68 170 aa16.2■□□□□ 0.18
PMS1-220ENST00000618056 OR5A1Q8NGJ0 315 aa16.2■□□□□ 0.18
PMS1-220ENST00000618056 IGKV3OR2-268A0A0C4DH90 116 aa16.19■□□□□ 0.18
PMS1-220ENST00000618056 DGAT2L7PQ6IED9 249 aa16.19■□□□□ 0.18
PMS1-220ENST00000618056 NUPR1O60356 82 aa16.18■□□□□ 0.18
PMS1-220ENST00000618056 VPS13BQ7Z7G8 4022 aa16.17■□□□□ 0.18
PMS1-220ENST00000618056 TCAPO15273 167 aa16.17■□□□□ 0.18
PMS1-220ENST00000618056 CDC42SE2Q9NRR3 84 aa16.17■□□□□ 0.18
PMS1-220ENST00000618056 HAMPP81172 84 aa16.16■□□□□ 0.18
PMS1-220ENST00000618056 ORMDL3Q8N138 153 aa16.16■□□□□ 0.18
PMS1-220ENST00000618056 CHCHD10Q8WYQ3 142 aaPredicted RBP16.16■□□□□ 0.18
PMS1-220ENST00000618056 SMIM2Q9BVW6 85 aa16.16■□□□□ 0.18
PMS1-220ENST00000618056 CSDC2Q9Y534 153 aaKnown RBP16.16■□□□□ 0.18
PMS1-220ENST00000618056 GAGE12HA6NDE8 117 aa16.16■□□□□ 0.18
PMS1-220ENST00000618056 NPYP01303 97 aa16.16■□□□□ 0.18
PMS1-220ENST00000618056 SMAGPQ0VAQ4 97 aa16.16■□□□□ 0.18
PMS1-220ENST00000618056 EPM2AB3EWF7 344 aa16.15■□□□□ 0.18
PMS1-220ENST00000618056 ZNF664Q8N3J9 261 aa16.14■□□□□ 0.17
PMS1-220ENST00000618056 UBE2D4Q9Y2X8 147 aa16.14■□□□□ 0.17
PMS1-220ENST00000618056 PYY3Q5JQD4 70 aa16.13■□□□□ 0.17
PMS1-220ENST00000618056 C9orf163Q8N9P6 203 aa16.13■□□□□ 0.17
PMS1-220ENST00000618056 LINC00959A0A1B0GUT2 108 aa16.12■□□□□ 0.17
PMS1-220ENST00000618056 CNBPP62633 177 aaKnown RBP16.12■□□□□ 0.17
PMS1-220ENST00000618056 PRELID3AQ96N28 172 aa16.12■□□□□ 0.17
PMS1-220ENST00000618056 TIMM21Q9BVV7 248 aa16.12■□□□□ 0.17
PMS1-220ENST00000618056 hDV102S1A0JD36 115 aa16.11■□□□□ 0.17
PMS1-220ENST00000618056 CFAP161Q6P656 301 aa16.11■□□□□ 0.17
PMS1-220ENST00000618056 LAMTOR2Q9Y2Q5 125 aa16.11■□□□□ 0.17
PMS1-220ENST00000618056 SMR3BP02814 79 aaPredicted RBP16.1■□□□□ 0.17
PMS1-220ENST00000618056 Q5VSD8 79 aa16.1■□□□□ 0.17
PMS1-220ENST00000618056 C15orf56Q8N910 161 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms