RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 C11orf45Q8TAV5 145 aa11.79□□□□□ -0.52
TRAPPC3-210ENST00000617904 TM2D3Q9BRN9 247 aa11.79□□□□□ -0.52
TRAPPC3-210ENST00000617904 MRPL35Q9NZE8 188 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-210ENST00000617904 CSDC2Q9Y534 153 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-210ENST00000617904 TRBV6-8A0A0A6YYG3 113 aa11.78□□□□□ -0.52
TRAPPC3-210ENST00000617904 H3BNG1 76 aa11.78□□□□□ -0.52
TRAPPC3-210ENST00000617904 MRPS36P82909 103 aaKnown RBP11.78□□□□□ -0.52
TRAPPC3-210ENST00000617904 PRO1933Q9H354 126 aa11.78□□□□□ -0.52
TRAPPC3-210ENST00000617904 CST9LQ9H4G1 147 aa11.78□□□□□ -0.52
TRAPPC3-210ENST00000617904 UQCR10Q9UDW1 63 aa11.78□□□□□ -0.52
TRAPPC3-210ENST00000617904 UBE2D4Q9Y2X8 147 aa11.78□□□□□ -0.52
TRAPPC3-210ENST00000617904 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC3-210ENST00000617904 LOC100131303A0A0U1RQF7 123 aa11.77□□□□□ -0.53
TRAPPC3-210ENST00000617904 IGKV2-29A2NJV5 120 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC3-210ENST00000617904 SEC11AP67812 179 aa11.77□□□□□ -0.53
TRAPPC3-210ENST00000617904 MRPL52Q86TS9 123 aaKnown RBP11.77□□□□□ -0.53
TRAPPC3-210ENST00000617904 OR5A1Q8NGJ0 315 aa11.77□□□□□ -0.53
TRAPPC3-210ENST00000617904 CHCHD5Q9BSY4 110 aa11.77□□□□□ -0.53
TRAPPC3-210ENST00000617904 Q9UF83 564 aa11.77□□□□□ -0.53
TRAPPC3-210ENST00000617904 IGLV4-3A0A075B6K6 122 aa11.76□□□□□ -0.53
TRAPPC3-210ENST00000617904 A0A0J9YWU9 116 aa11.76□□□□□ -0.53
TRAPPC3-210ENST00000617904 LINC00694P0DN24 101 aa11.76□□□□□ -0.53
TRAPPC3-210ENST00000617904 MIEN1Q9BRT3 115 aa11.76□□□□□ -0.53
TRAPPC3-210ENST00000617904 A0A0J9YY99 117 aa11.75□□□□□ -0.53
TRAPPC3-210ENST00000617904 FGF6P10767 208 aa11.75□□□□□ -0.53
TRAPPC3-210ENST00000617904 DDTP30046 118 aa11.75□□□□□ -0.53
TRAPPC3-210ENST00000617904 C12orf74Q32Q52 190 aa11.75□□□□□ -0.53
TRAPPC3-210ENST00000617904 hDV102S1A0JD36 115 aa11.74□□□□□ -0.53
TRAPPC3-210ENST00000617904 LYSTQ99698 3801 aa11.74□□□□□ -0.53
TRAPPC3-210ENST00000617904 DNAH1Q9P2D7 4330 aa11.74□□□□□ -0.53
TRAPPC3-210ENST00000617904 STARD9Q9P2P6 4700 aa11.73□□□□□ -0.53
TRAPPC3-210ENST00000617904 LCE6AA0A183 80 aa11.73□□□□□ -0.53
TRAPPC3-210ENST00000617904 ZC2HC1BQ5TFG8 222 aa11.73□□□□□ -0.53
TRAPPC3-210ENST00000617904 ZFAND6Q6FIF0 208 aa11.73□□□□□ -0.53
TRAPPC3-210ENST00000617904 SLC25A34Q6PIV7 304 aa11.73□□□□□ -0.53
TRAPPC3-210ENST00000617904 IGLC3P0DOY3 106 aa11.72□□□□□ -0.53
TRAPPC3-210ENST00000617904 NTM-AS1Q6ZSK4 140 aa11.72□□□□□ -0.53
TRAPPC3-210ENST00000617904 VSIG2Q96IQ7 327 aa11.72□□□□□ -0.53
TRAPPC3-210ENST00000617904 AMELXQ99217 191 aa11.72□□□□□ -0.53
TRAPPC3-210ENST00000617904 TRAV10A0A0B4J240 114 aa11.71□□□□□ -0.53
TRAPPC3-210ENST00000617904 NFE4Q86UQ8 179 aa11.71□□□□□ -0.53
TRAPPC3-210ENST00000617904 GEMIN7Q9H840 131 aaKnown RBP11.71□□□□□ -0.53
TRAPPC3-210ENST00000617904 CSMD3Q7Z407 3707 aa11.71□□□□□ -0.54
TRAPPC3-210ENST00000617904 DEFB131BA0A096LNP1 70 aa11.7□□□□□ -0.54
TRAPPC3-210ENST00000617904 C11orf86A6NJI1 115 aa11.7□□□□□ -0.54
TRAPPC3-210ENST00000617904 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
TRAPPC3-210ENST00000617904 HNRNPA3P51991 378 aaKnown RBP11.7□□□□□ -0.54
TRAPPC3-210ENST00000617904 TMEM170BQ5T4T1 132 aa11.7□□□□□ -0.54
TRAPPC3-210ENST00000617904 CHAC1Q9BUX1 264 aa11.7□□□□□ -0.54
TRAPPC3-210ENST00000617904 H3BRM9 83 aa11.69□□□□□ -0.54
TRAPPC3-210ENST00000617904 NMUP48645 174 aa11.69□□□□□ -0.54
TRAPPC3-210ENST00000617904 MAJINQ3KP22 176 aa11.69□□□□□ -0.54
TRAPPC3-210ENST00000617904 Q6ZTC4 211 aa11.69□□□□□ -0.54
TRAPPC3-210ENST00000617904 TRAV8-6A0A0B4J262 113 aa11.68□□□□□ -0.54
TRAPPC3-210ENST00000617904 COX8AP10176 69 aa11.68□□□□□ -0.54
TRAPPC3-210ENST00000617904 TIRAPP58753 221 aa11.68□□□□□ -0.54
TRAPPC3-210ENST00000617904 GAGE6Q13070 117 aa11.68□□□□□ -0.54
TRAPPC3-210ENST00000617904 Q6ZUT4 128 aa11.68□□□□□ -0.54
TRAPPC3-210ENST00000617904 STPG4Q8N801 248 aa11.68□□□□□ -0.54
TRAPPC3-210ENST00000617904 C14orf144Q96I85 54 aa11.68□□□□□ -0.54
TRAPPC3-210ENST00000617904 EPPK1P58107 5090 aaKnown RBP11.68□□□□□ -0.54
TRAPPC3-210ENST00000617904 TINCRA0A1B0GVN0 87 aa11.67□□□□□ -0.54
TRAPPC3-210ENST00000617904 HERVK_113P63121 156 aa11.67□□□□□ -0.54
TRAPPC3-210ENST00000617904 LELP1Q5T871 98 aa11.67□□□□□ -0.54
TRAPPC3-210ENST00000617904 CEMP1Q6PRD7 247 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC3-210ENST00000617904 OPRPNQ99935 248 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC3-210ENST00000617904 A0A1B0GUV1 79 aa11.66□□□□□ -0.54
TRAPPC3-210ENST00000617904 NANOS2P60321 138 aaKnown RBP11.66□□□□□ -0.54
TRAPPC3-210ENST00000617904 C15orf53Q8NAA6 179 aa11.66□□□□□ -0.54
TRAPPC3-210ENST00000617904 CDC42SE2Q9NRR3 84 aa11.66□□□□□ -0.54
TRAPPC3-210ENST00000617904 BIRC6Q9NR09 4857 aa11.66□□□□□ -0.54
TRAPPC3-210ENST00000617904 IGLV4-69A0A075B6H9 119 aa11.65□□□□□ -0.54
TRAPPC3-210ENST00000617904 A0A096LPF7 62 aa11.65□□□□□ -0.54
TRAPPC3-210ENST00000617904 CCL25O15444 150 aa11.65□□□□□ -0.54
TRAPPC3-210ENST00000617904 DLEU1O43261 78 aa11.65□□□□□ -0.54
TRAPPC3-210ENST00000617904 ANKRD39Q53RE8 183 aa11.65□□□□□ -0.54
TRAPPC3-210ENST00000617904 A0A0J9YXV3 536 aa11.64□□□□□ -0.55
TRAPPC3-210ENST00000617904 E9PLD3 99 aa11.64□□□□□ -0.55
TRAPPC3-210ENST00000617904 SIVA1O15304 175 aa11.64□□□□□ -0.55
TRAPPC3-210ENST00000617904 UBE2D1P51668 147 aa11.63□□□□□ -0.55
TRAPPC3-210ENST00000617904 PLEKHB2Q96CS7 222 aa11.63□□□□□ -0.55
TRAPPC3-210ENST00000617904 MRPS16Q9Y3D3 137 aaKnown RBP11.63□□□□□ -0.55
TRAPPC3-210ENST00000617904 RNASE13Q5GAN3 156 aaKnown RBP11.62□□□□□ -0.55
TRAPPC3-210ENST00000617904 LINC00469Q8N7U9 141 aa11.62□□□□□ -0.55
TRAPPC3-210ENST00000617904 HYDINQ4G0P3 5121 aa11.62□□□□□ -0.55
TRAPPC3-210ENST00000617904 LGALS3P17931 250 aaKnown RBP11.61□□□□□ -0.55
TRAPPC3-210ENST00000617904 SS18Q15532 418 aa11.61□□□□□ -0.55
TRAPPC3-210ENST00000617904 FAM19A3Q7Z5A8 133 aa11.61□□□□□ -0.55
TRAPPC3-210ENST00000617904 TRAV13-1A0A0B4J241 112 aa11.6□□□□□ -0.55
TRAPPC3-210ENST00000617904 ZNF22P17026 224 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC3-210ENST00000617904 LYPD5Q6UWN5 251 aa11.6□□□□□ -0.55
TRAPPC3-210ENST00000617904 BOD1L2Q8IYS8 172 aa11.6□□□□□ -0.55
TRAPPC3-210ENST00000617904 LEPROTO15243 131 aa11.6□□□□□ -0.55
TRAPPC3-210ENST00000617904 RBX1P62877 108 aa11.6□□□□□ -0.55
TRAPPC3-210ENST00000617904 TMEM223A0PJW6 202 aa11.59□□□□□ -0.55
TRAPPC3-210ENST00000617904 LINC00587B1AMM8 73 aa11.59□□□□□ -0.55
TRAPPC3-210ENST00000617904 M0R143 59 aa11.59□□□□□ -0.55
TRAPPC3-210ENST00000617904 MYMXA0A1B0GTQ4 84 aa11.58□□□□□ -0.56
TRAPPC3-210ENST00000617904 TCTAP57738 103 aa11.58□□□□□ -0.56
TRAPPC3-210ENST00000617904 ANGP03950 147 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms