RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SPANXCQ9NY87 97 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 PEMTQ9UBM1 199 aa4.89□□□□□ -1.63
LMO3-235ENST00000616247 FN1P02751 2386 aaKnown RBP4.89□□□□□ -1.63
LMO3-235ENST00000616247 POLQO75417 2590 aa4.88□□□□□ -1.63
LMO3-235ENST00000616247 FAM208BQ5VWN6 2430 aa4.88□□□□□ -1.63
LMO3-235ENST00000616247 IGHV4-38-2P0DP08 117 aa4.88□□□□□ -1.63
LMO3-235ENST00000616247 C19orf54Q5BKX5 351 aa4.88□□□□□ -1.63
LMO3-235ENST00000616247 C9orf85Q96MD7 179 aa4.88□□□□□ -1.63
LMO3-235ENST00000616247 CITED2Q99967 270 aaPredicted RBP4.88□□□□□ -1.63
LMO3-235ENST00000616247 CRPP02741 224 aa4.88□□□□□ -1.63
LMO3-235ENST00000616247 LINC00158P58513 81 aa4.88□□□□□ -1.63
LMO3-235ENST00000616247 DSCR8Q96T75 97 aa4.88□□□□□ -1.63
LMO3-235ENST00000616247 ACACBO00763 2458 aa4.88□□□□□ -1.63
LMO3-235ENST00000616247 J3QL48 77 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 COX6A2Q02221 97 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 Q6ZSN1 163 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 NRGNQ92686 78 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 CACNA1AO00555 2505 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 SLPIP03973 132 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 INAFM2P0DMQ5 153 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 COX7CP15954 63 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 PFN2P35080 140 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 KIR2DL5BQ8NHK3 375 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 DCANP1Q8TF63 244 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 FAM19A4Q96LR4 140 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 BSNQ9UPA5 3926 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 A0A1W2PPR1 153 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 SMIM9A6NGZ8 99 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 CFHR3Q02985 330 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 LINC00526Q96FQ7 95 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 UBE2E2Q96LR5 201 aa4.87□□□□□ -1.63
LMO3-235ENST00000616247 LMO4P61968 165 aa4.86□□□□□ -1.63
LMO3-235ENST00000616247 C5orf47Q569G3 176 aa4.86□□□□□ -1.63
LMO3-235ENST00000616247 RNF152Q8N8N0 203 aa4.86□□□□□ -1.63
LMO3-235ENST00000616247 FAM218AQ96MZ4 157 aa4.86□□□□□ -1.63
LMO3-235ENST00000616247 IMUPQ9GZP8 106 aa4.86□□□□□ -1.63
LMO3-235ENST00000616247 CENPEQ02224 2701 aa4.86□□□□□ -1.63
LMO3-235ENST00000616247 PAX4O43316 350 aa4.86□□□□□ -1.63
LMO3-235ENST00000616247 HIST2H2BDQ6DRA6 164 aa4.86□□□□□ -1.63
LMO3-235ENST00000616247 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.86□□□□□ -1.63
LMO3-235ENST00000616247 UBE2D4Q9Y2X8 147 aa4.86□□□□□ -1.63
LMO3-235ENST00000616247 ATOX1O00244 68 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 IGHG2P01859 326 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 MALP21145 153 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 OXLD1Q5BKU9 147 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 SOSTDC1Q6X4U4 206 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 TRGV1A0A0A0MS02 117 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 NCR3O14931 201 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 DEFB136Q30KP8 78 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 APRG1Q8IVJ8 170 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 WFDC9Q8NEX5 89 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 XCL2Q9UBD3 114 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 PYGO1Q9Y3Y4 419 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 UBE2L6O14933 153 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 LECT2O14960 151 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 NDUFA1O15239 70 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 MIR7-3HGQ8N6C7 128 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 COPS9Q8WXC6 57 aa4.85□□□□□ -1.63
LMO3-235ENST00000616247 HRNRQ86YZ3 2850 aaPredicted RBP4.85□□□□□ -1.63
LMO3-235ENST00000616247 RPL36AP83881 106 aaKnown RBP4.84□□□□□ -1.63
LMO3-235ENST00000616247 ADORA2A-AS1P86434 159 aa4.84□□□□□ -1.63
LMO3-235ENST00000616247 C11orf71Q6IPW1 123 aa4.84□□□□□ -1.63
LMO3-235ENST00000616247 RPL36ALQ969Q0 106 aaKnown RBP4.84□□□□□ -1.63
LMO3-235ENST00000616247 CHCHD7Q9BUK0 85 aa4.84□□□□□ -1.63
LMO3-235ENST00000616247 SND1-IT1Q9HBX3 110 aa4.84□□□□□ -1.63
LMO3-235ENST00000616247 CCDC168Q8NDH2 2452 aa4.84□□□□□ -1.63
LMO3-235ENST00000616247 ZNF415Q09FC8 603 aa4.84□□□□□ -1.63
LMO3-235ENST00000616247 HRCT1Q6UXD1 115 aa4.84□□□□□ -1.63
LMO3-235ENST00000616247 TRAV23DV6A0A075B6W5 121 aa4.84□□□□□ -1.64
LMO3-235ENST00000616247 IGHV4-61A0A0C4DH41 118 aa4.84□□□□□ -1.64
LMO3-235ENST00000616247 RBMY1A1P0DJD3 496 aaKnown RBP4.84□□□□□ -1.64
LMO3-235ENST00000616247 RBMY1CP0DJD4 496 aa4.84□□□□□ -1.64
LMO3-235ENST00000616247 RBMY1FQ15415 496 aaKnown RBP4.84□□□□□ -1.64
LMO3-235ENST00000616247 PIMREGQ9BSJ6 248 aa4.84□□□□□ -1.64
LMO3-235ENST00000616247 K7EQG2 157 aa4.83□□□□□ -1.64
LMO3-235ENST00000616247 DEFB121Q5J5C9 76 aa4.83□□□□□ -1.64
LMO3-235ENST00000616247 LINC00242Q5T6M2 205 aa4.83□□□□□ -1.64
LMO3-235ENST00000616247 HIST2H2BCQ6DN03 193 aa4.83□□□□□ -1.64
LMO3-235ENST00000616247 C10orf105Q8TEF2 133 aa4.83□□□□□ -1.64
LMO3-235ENST00000616247 CYSTM1Q9H1C7 97 aa4.83□□□□□ -1.64
LMO3-235ENST00000616247 RPL18AQ02543 176 aaKnown RBP4.83□□□□□ -1.64
LMO3-235ENST00000616247 DYNLRB2Q8TF09 96 aa4.83□□□□□ -1.64
LMO3-235ENST00000616247 LINC00846Q9NV44 126 aa4.83□□□□□ -1.64
LMO3-235ENST00000616247 NAV2Q8IVL1 2488 aa4.83□□□□□ -1.64
LMO3-235ENST00000616247 A0A087WYN8 130 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 IGHV4-59P01825 116 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 C9orf129Q5T035 196 aaKnown RBP4.82□□□□□ -1.64
LMO3-235ENST00000616247 LRRC75A-AS1Q8N1F1 130 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 MAPK1IP1LQ8NDC0 245 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 FAM104AQ969W3 186 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 TRAV13-2A0A0B4J235 113 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 USP17L23D6RBM5 183 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 C4orf26Q17RF5 130 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 C11orf44Q8N8P7 122 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 TIMM17BO60830 172 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 HILS1P60008 231 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 C5orf38Q86SI9 138 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 PIEZO1Q92508 2521 aa4.82□□□□□ -1.64
LMO3-235ENST00000616247 ZFYVE26Q68DK2 2539 aa4.81□□□□□ -1.64
LMO3-235ENST00000616247 SMIM1B2RUZ4 78 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms