RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 KIAA1549LQ6ZVL6 1849 aa13.85□□□□□ -0.19
GABPB1-212ENST00000615671 RETNLBQ9BQ08 111 aa13.84□□□□□ -0.19
GABPB1-212ENST00000615671 CCKP06307 115 aa13.84□□□□□ -0.19
GABPB1-212ENST00000615671 BRWD1-AS2P59051 145 aa13.84□□□□□ -0.19
GABPB1-212ENST00000615671 H3BT86 120 aa13.83□□□□□ -0.2
GABPB1-212ENST00000615671 RNASE8Q8TDE3 154 aaKnown RBP13.83□□□□□ -0.2
GABPB1-212ENST00000615671 H7C423 109 aa13.82□□□□□ -0.2
GABPB1-212ENST00000615671 ZNF22P17026 224 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-212ENST00000615671 ZFAND3Q9H8U3 227 aa13.82□□□□□ -0.2
GABPB1-212ENST00000615671 FAM208BQ5VWN6 2430 aa13.82□□□□□ -0.2
GABPB1-212ENST00000615671 BRI3O95415 125 aa13.82□□□□□ -0.2
GABPB1-212ENST00000615671 EDN2P20800 178 aa13.82□□□□□ -0.2
GABPB1-212ENST00000615671 TECTAO75443 2155 aa13.82□□□□□ -0.2
GABPB1-212ENST00000615671 M0QY20 66 aa13.82□□□□□ -0.2
GABPB1-212ENST00000615671 IGLV2-8P01709 118 aa13.82□□□□□ -0.2
GABPB1-212ENST00000615671 RBX1P62877 108 aa13.82□□□□□ -0.2
GABPB1-212ENST00000615671 CDSNQ15517 529 aa13.81□□□□□ -0.2
GABPB1-212ENST00000615671 MUC6Q6W4X9 2439 aa13.81□□□□□ -0.2
GABPB1-212ENST00000615671 PDE6GP18545 87 aa13.81□□□□□ -0.2
GABPB1-212ENST00000615671 LINC00308Q8TCZ7 52 aa13.81□□□□□ -0.2
GABPB1-212ENST00000615671 COL4A4P53420 1690 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-212ENST00000615671 TRBV6-4A0A1B0GX49 114 aa13.8□□□□□ -0.2
GABPB1-212ENST00000615671 PRR4Q16378 134 aa13.8□□□□□ -0.2
GABPB1-212ENST00000615671 C20orf197Q8N268 126 aa13.8□□□□□ -0.2
GABPB1-212ENST00000615671 KIAA1549Q9HCM3 1950 aa13.8□□□□□ -0.2
GABPB1-212ENST00000615671 PSMG3-AS1Q96PY0 264 aa13.8□□□□□ -0.2
GABPB1-212ENST00000615671 SPANXB1Q9NS25 103 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-212ENST00000615671 NUP210LQ5VU65 1888 aa13.8□□□□□ -0.2
GABPB1-212ENST00000615671 CRIP1P50238 77 aa13.8□□□□□ -0.2
GABPB1-212ENST00000615671 Q6ZPA2 131 aa13.8□□□□□ -0.2
GABPB1-212ENST00000615671 CREBBPQ92793 2442 aa13.8□□□□□ -0.2
GABPB1-212ENST00000615671 IGLC6P0CF74 106 aa13.8□□□□□ -0.2
GABPB1-212ENST00000615671 J3KT08 172 aa13.79□□□□□ -0.2
GABPB1-212ENST00000615671 KRTAP10-9P60411 292 aa13.79□□□□□ -0.2
GABPB1-212ENST00000615671 SPATA12Q7Z6I5 190 aa13.79□□□□□ -0.2
GABPB1-212ENST00000615671 DSCAMO60469 2012 aa13.78□□□□□ -0.2
GABPB1-212ENST00000615671 NUPR2A6NF83 97 aa13.78□□□□□ -0.2
GABPB1-212ENST00000615671 CIRBP-AS1Q8TBR5 109 aa13.78□□□□□ -0.2
GABPB1-212ENST00000615671 LOC107984640A0A0U1RRK4 108 aa13.77□□□□□ -0.2
GABPB1-212ENST00000615671 HIVEP2P31629 2446 aa13.77□□□□□ -0.2
GABPB1-212ENST00000615671 IBA57-AS1B1ANH7 110 aa13.77□□□□□ -0.21
GABPB1-212ENST00000615671 TRBV6-5A0A0K0K1A5 114 aa13.77□□□□□ -0.21
GABPB1-212ENST00000615671 K7ERS5 55 aa13.77□□□□□ -0.21
GABPB1-212ENST00000615671 ZNF706Q9Y5V0 76 aaPredicted RBP13.77□□□□□ -0.21
GABPB1-212ENST00000615671 COA6Q5JTJ3 125 aaKnown RBP13.76□□□□□ -0.21
GABPB1-212ENST00000615671 IGLV4-69A0A075B6H9 119 aa13.76□□□□□ -0.21
GABPB1-212ENST00000615671 A0A1B0GXF2 115 aa13.76□□□□□ -0.21
GABPB1-212ENST00000615671 IGLV2-11P01706 119 aa13.76□□□□□ -0.21
GABPB1-212ENST00000615671 PRR9Q5T870 116 aa13.76□□□□□ -0.21
GABPB1-212ENST00000615671 MAPKAPK5-AS1Q8N8E1 139 aa13.76□□□□□ -0.21
GABPB1-212ENST00000615671 TRIAP1O43715 76 aa13.75□□□□□ -0.21
GABPB1-212ENST00000615671 FAM30AQ9NZY2 134 aa13.74□□□□□ -0.21
GABPB1-212ENST00000615671 LINC00959A0A1B0GUT2 108 aa13.74□□□□□ -0.21
GABPB1-212ENST00000615671 LELP1Q5T871 98 aa13.74□□□□□ -0.21
GABPB1-212ENST00000615671 SNURFQ9Y675 71 aa13.74□□□□□ -0.21
GABPB1-212ENST00000615671 FREM1Q5H8C1 2179 aa13.74□□□□□ -0.21
GABPB1-212ENST00000615671 C11orf1Q9H5F2 150 aa13.74□□□□□ -0.21
GABPB1-212ENST00000615671 P0C879 139 aa13.73□□□□□ -0.21
GABPB1-212ENST00000615671 NDUFV3P56181 108 aaKnown RBP13.73□□□□□ -0.21
GABPB1-212ENST00000615671 POM121L12Q8N7R1 296 aa13.73□□□□□ -0.21
GABPB1-212ENST00000615671 CD164L2Q6UWJ8 174 aa13.73□□□□□ -0.21
GABPB1-212ENST00000615671 RNF185Q96GF1 192 aa13.73□□□□□ -0.21
GABPB1-212ENST00000615671 IGLV5-52A0A0A0MRZ9 124 aa13.72□□□□□ -0.21
GABPB1-212ENST00000615671 Q6ZQY7 126 aa13.72□□□□□ -0.21
GABPB1-212ENST00000615671 LINC00643Q86TS7 51 aa13.72□□□□□ -0.21
GABPB1-212ENST00000615671 OTOGLQ3ZCN5 2332 aa13.72□□□□□ -0.21
GABPB1-212ENST00000615671 MED12LQ86YW9 2145 aa13.72□□□□□ -0.21
GABPB1-212ENST00000615671 LINC00574Q9H8X3 128 aa13.72□□□□□ -0.21
GABPB1-212ENST00000615671 X6R8D5 127 aa13.72□□□□□ -0.21
GABPB1-212ENST00000615671 M0R378 163 aa13.71□□□□□ -0.21
GABPB1-212ENST00000615671 G3V4G9 280 aa13.71□□□□□ -0.21
GABPB1-212ENST00000615671 TSHBP01222 138 aa13.71□□□□□ -0.21
GABPB1-212ENST00000615671 AVPP01185 164 aa13.71□□□□□ -0.21
GABPB1-212ENST00000615671 MBD6Q96DN6 1003 aa13.71□□□□□ -0.21
GABPB1-212ENST00000615671 ALPK3Q96L96 1907 aa13.71□□□□□ -0.22
GABPB1-212ENST00000615671 MT-ATP8P03928 68 aa13.69□□□□□ -0.22
GABPB1-212ENST00000615671 A0A0U1RQV1 116 aa13.69□□□□□ -0.22
GABPB1-212ENST00000615671 M0QXV9 152 aa13.68□□□□□ -0.22
GABPB1-212ENST00000615671 RNASE3P12724 160 aaKnown RBP13.68□□□□□ -0.22
GABPB1-212ENST00000615671 EBI3Q14213 229 aa13.68□□□□□ -0.22
GABPB1-212ENST00000615671 NDUFA7O95182 113 aa13.68□□□□□ -0.22
GABPB1-212ENST00000615671 C9orf116Q5BN46 136 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-212ENST00000615671 CEP192Q8TEP8 1941 aa13.67□□□□□ -0.22
GABPB1-212ENST00000615671 DHRS4-AS1Q9P1J3 65 aa13.67□□□□□ -0.22
GABPB1-212ENST00000615671 PCDH15Q96QU1 1955 aa13.67□□□□□ -0.22
GABPB1-212ENST00000615671 ZNF295-AS1Q8N0V1 137 aa13.67□□□□□ -0.22
GABPB1-212ENST00000615671 SMIM11BQ8TCY0 68 aa13.66□□□□□ -0.22
GABPB1-212ENST00000615671 Q6ZVQ6 151 aa13.66□□□□□ -0.22
GABPB1-212ENST00000615671 SERP1Q9Y6X1 66 aa13.65□□□□□ -0.22
GABPB1-212ENST00000615671 EIF4EBP1Q13541 118 aaPredicted RBP13.65□□□□□ -0.22
GABPB1-212ENST00000615671 LTBP2Q14767 1821 aa13.65□□□□□ -0.22
GABPB1-212ENST00000615671 PRR15LQ9BU68 103 aa13.65□□□□□ -0.22
GABPB1-212ENST00000615671 FAM236DA0A1B0GTK5 79 aa13.64□□□□□ -0.23
GABPB1-212ENST00000615671 FAM236CP0DP71 79 aa13.64□□□□□ -0.23
GABPB1-212ENST00000615671 C11orf21Q9P2W6 132 aa13.64□□□□□ -0.23
GABPB1-212ENST00000615671 C10orf25Q5T742 122 aa13.64□□□□□ -0.23
GABPB1-212ENST00000615671 C6orf223Q8N319 242 aa13.64□□□□□ -0.23
GABPB1-212ENST00000615671 CYSRT1A8MQ03 144 aa13.64□□□□□ -0.23
GABPB1-212ENST00000615671 GAS8-AS1O95177 125 aa13.64□□□□□ -0.23
GABPB1-212ENST00000615671 CRIP3Q6Q6R5 217 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms