RNA–Protein interactions for RNA: ENST00000615597.1

TMEM106C-222, Transcript of transmembrane protein 106C, human

TSL 2

Gene TMEM106C, Length 685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM106C-222	ENST00000615597	RPL23	P62829	140 aa	Known RBP	4.85	□□□□□ -1.63
TMEM106C-222	ENST00000615597	CIRBP	Q14011	172 aa	Known RBP	4.85	□□□□□ -1.63
TMEM106C-222	ENST00000615597	TMEM241	Q24JQ0	296 aa		4.85	□□□□□ -1.63
TMEM106C-222	ENST00000615597	SDIM1	Q6ZPB5	146 aa		4.85	□□□□□ -1.63
TMEM106C-222	ENST00000615597	NUP35	Q8NFH5	326 aa		4.85	□□□□□ -1.63
TMEM106C-222	ENST00000615597	CIRBP-AS1	Q8TBR5	109 aa		4.85	□□□□□ -1.63
TMEM106C-222	ENST00000615597	BORCS7	Q96B45	105 aa		4.85	□□□□□ -1.63
TMEM106C-222	ENST00000615597	RPL39L	Q96EH5	51 aa	Known RBP	4.85	□□□□□ -1.63
TMEM106C-222	ENST00000615597	MRAP2	Q96G30	205 aa		4.85	□□□□□ -1.63
TMEM106C-222	ENST00000615597	PPP1R17	O96001	155 aa		4.84	□□□□□ -1.63
TMEM106C-222	ENST00000615597	HLA-DQA1	P01909	254 aa		4.84	□□□□□ -1.63
TMEM106C-222	ENST00000615597	CEBPG	P53567	150 aa		4.84	□□□□□ -1.63
TMEM106C-222	ENST00000615597	HAMP	P81172	84 aa		4.84	□□□□□ -1.63
TMEM106C-222	ENST00000615597	PEA15	Q15121	130 aa		4.84	□□□□□ -1.63
TMEM106C-222	ENST00000615597	LINC01620	Q4KN68	170 aa		4.84	□□□□□ -1.63
TMEM106C-222	ENST00000615597	MRPL52	Q86TS9	123 aa	Known RBP	4.84	□□□□□ -1.63
TMEM106C-222	ENST00000615597	NAT8	Q9UHE5	227 aa		4.84	□□□□□ -1.63
TMEM106C-222	ENST00000615597	NAT8B	Q9UHF3	227 aa		4.84	□□□□□ -1.63
TMEM106C-222	ENST00000615597	CSDC2	Q9Y534	153 aa	Known RBP	4.84	□□□□□ -1.63
TMEM106C-222	ENST00000615597	FSIP2	Q5CZC0	6907 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	TRBV24-1	A0A075B6N3	115 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597		A0A1B0GW15	77 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	LINC00862	A6NCI5	91 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	GAS8-AS1	O95177	125 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	TSHB	P01222	138 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	APCS	P02743	223 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	SLPI	P03973	132 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	FGF6	P10767	208 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	RPL32	P62910	135 aa	Known RBP	4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	RIG	Q13278	110 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	CLPSL2	Q6UWE3	100 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	AMN1	Q8IY45	258 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	OR5A1	Q8NGJ0	315 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	ST20	Q9HBF5	79 aa		4.83	□□□□□ -1.64
TMEM106C-222	ENST00000615597	IGLV10-54	A0A075B6I4	117 aa		4.82	□□□□□ -1.64
TMEM106C-222	ENST00000615597	PMCH	P20382	165 aa		4.82	□□□□□ -1.64
TMEM106C-222	ENST00000615597	RPS10	P46783	165 aa	Known RBP	4.82	□□□□□ -1.64
TMEM106C-222	ENST00000615597	SRSF3	P84103	164 aa	Known RBP	4.82	□□□□□ -1.64
TMEM106C-222	ENST00000615597	FAM104B	Q5XKR9	115 aa		4.82	□□□□□ -1.64
TMEM106C-222	ENST00000615597	CFAP161	Q6P656	301 aa		4.82	□□□□□ -1.64
TMEM106C-222	ENST00000615597	C15orf56	Q8N910	161 aa		4.82	□□□□□ -1.64
TMEM106C-222	ENST00000615597	NRAC	Q8N912	160 aa		4.82	□□□□□ -1.64
TMEM106C-222	ENST00000615597	DEFB104A	Q8WTQ1	72 aa		4.82	□□□□□ -1.64
TMEM106C-222	ENST00000615597	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.81	□□□□□ -1.64
TMEM106C-222	ENST00000615597	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.81	□□□□□ -1.64
TMEM106C-222	ENST00000615597	VCY	O14598	125 aa		4.81	□□□□□ -1.64
TMEM106C-222	ENST00000615597	PPP1R2P9	O14990	202 aa		4.81	□□□□□ -1.64
TMEM106C-222	ENST00000615597	CCL25	O15444	150 aa		4.81	□□□□□ -1.64
TMEM106C-222	ENST00000615597	SUMO2	P61956	95 aa	Known RBP	4.81	□□□□□ -1.64
TMEM106C-222	ENST00000615597	AMMECR1L	Q6DCA0	310 aa		4.81	□□□□□ -1.64
TMEM106C-222	ENST00000615597	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.81	□□□□□ -1.64
TMEM106C-222	ENST00000615597	C20orf78	Q9BR46	151 aa		4.81	□□□□□ -1.64
TMEM106C-222	ENST00000615597	CDC42SE2	Q9NRR3	84 aa		4.81	□□□□□ -1.64
TMEM106C-222	ENST00000615597	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597	LINC00959	A0A1B0GUT2	108 aa		4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597		A0A1B0GXF2	115 aa		4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597	hDV102S1	A0JD36	115 aa		4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597	C7orf77	A4D0Y5	90 aa		4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597	PHOX2A	O14813	284 aa		4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597	TCAP	O15273	167 aa		4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597	FOXI1	Q12951	378 aa		4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597	ADIRF	Q15847	76 aa		4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597	BTF3L4	Q96K17	158 aa		4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597	TIMM21	Q9BVV7	248 aa		4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597	AP5S1	Q9NUS5	200 aa		4.8	□□□□□ -1.64
TMEM106C-222	ENST00000615597	IGHV3-64	A0A075B6Q5	118 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	GAGE12H	A6NDE8	117 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	PRSS47	A8MTI9	375 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	PANO1	I0J062	215 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	S100A8	P05109	93 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	SMAGP	Q0VAQ4	97 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	MRPL51	Q4U2R6	128 aa	Known RBP	4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	RNASEK	Q6P5S7	137 aa	Known RBP	4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	CD164L2	Q6UWJ8	174 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	ATP5L2	Q7Z4Y8	100 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	ZNF664	Q8N3J9	261 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	TMEM101	Q96IK0	257 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	KIR2DL4	Q99706	377 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	TMEM242	Q9NWH2	141 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	CRCT1	Q9UGL9	99 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597	UBE2D4	Q9Y2X8	147 aa		4.79	□□□□□ -1.64
TMEM106C-222	ENST00000615597		F8W036	122 aa		4.78	□□□□□ -1.64
TMEM106C-222	ENST00000615597	PPBP	P02775	128 aa		4.78	□□□□□ -1.64
TMEM106C-222	ENST00000615597	HBB	P68871	147 aa		4.78	□□□□□ -1.64
TMEM106C-222	ENST00000615597	PNRC1	Q12796	327 aa	Predicted RBP	4.78	□□□□□ -1.64
TMEM106C-222	ENST00000615597	SPACA4	Q8TDM5	124 aa		4.78	□□□□□ -1.64
TMEM106C-222	ENST00000615597	TNXB	P22105	4242 aa		4.77	□□□□□ -1.65
TMEM106C-222	ENST00000615597	IGHV1-58	A0A0C4DH39	117 aa		4.77	□□□□□ -1.65
TMEM106C-222	ENST00000615597	C1orf196	B1AJZ1	125 aa		4.77	□□□□□ -1.65
TMEM106C-222	ENST00000615597	SMKR1	H3BMG3	65 aa		4.77	□□□□□ -1.65
TMEM106C-222	ENST00000615597	TNFRSF6B	O95407	300 aa		4.77	□□□□□ -1.65
TMEM106C-222	ENST00000615597	OXT	P01178	125 aa		4.77	□□□□□ -1.65
TMEM106C-222	ENST00000615597	SS18	Q15532	418 aa		4.77	□□□□□ -1.65
TMEM106C-222	ENST00000615597	FAM104A	Q969W3	186 aa		4.77	□□□□□ -1.65
TMEM106C-222	ENST00000615597	TMEM18	Q96B42	140 aa		4.77	□□□□□ -1.65
TMEM106C-222	ENST00000615597	PLAC8	Q9NZF1	115 aa		4.77	□□□□□ -1.65
TMEM106C-222	ENST00000615597		A0A087WYN8	130 aa		4.76	□□□□□ -1.65
TMEM106C-222	ENST00000615597	IGKV3OR2-268	A0A0C4DH90	116 aa		4.76	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms