RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 PRELID3AQ96N28 172 aa10.92□□□□□ -0.66
CBWD3-211ENST00000615061 PRSS1P07477 247 aa10.91□□□□□ -0.66
CBWD3-211ENST00000615061 RPL32P62910 135 aaKnown RBP10.91□□□□□ -0.66
CBWD3-211ENST00000615061 MRPL52Q86TS9 123 aaKnown RBP10.91□□□□□ -0.66
CBWD3-211ENST00000615061 OR5A1Q8NGJ0 315 aa10.91□□□□□ -0.66
CBWD3-211ENST00000615061 TMEM101Q96IK0 257 aa10.91□□□□□ -0.66
CBWD3-211ENST00000615061 IMMP2LQ96T52 175 aa10.91□□□□□ -0.66
CBWD3-211ENST00000615061 CTDSP1Q9GZU7 261 aa10.91□□□□□ -0.66
CBWD3-211ENST00000615061 CDC42SE2Q9NRR3 84 aa10.9□□□□□ -0.66
CBWD3-211ENST00000615061 GAGE12HA6NDE8 117 aa10.9□□□□□ -0.67
CBWD3-211ENST00000615061 PHOX2AO14813 284 aa10.9□□□□□ -0.67
CBWD3-211ENST00000615061 TCAPO15273 167 aa10.9□□□□□ -0.67
CBWD3-211ENST00000615061 C14orf177Q52M58 125 aa10.9□□□□□ -0.67
CBWD3-211ENST00000615061 CHCHD10Q8WYQ3 142 aaPredicted RBP10.9□□□□□ -0.67
CBWD3-211ENST00000615061 CARHSP1Q9Y2V2 147 aaKnown RBP10.9□□□□□ -0.67
CBWD3-211ENST00000615061 UBE2D4Q9Y2X8 147 aa10.89□□□□□ -0.67
CBWD3-211ENST00000615061 RPL39P62891 51 aaKnown RBP10.88□□□□□ -0.67
CBWD3-211ENST00000615061 RNASE13Q5GAN3 156 aaKnown RBP10.88□□□□□ -0.67
CBWD3-211ENST00000615061 ZNF664Q8N3J9 261 aa10.88□□□□□ -0.67
CBWD3-211ENST00000615061 CLRN3Q8NCR9 226 aa10.88□□□□□ -0.67
CBWD3-211ENST00000615061 LOC389332A0A1B0GUA5 103 aa10.87□□□□□ -0.67
CBWD3-211ENST00000615061 LINC00959A0A1B0GUT2 108 aa10.87□□□□□ -0.67
CBWD3-211ENST00000615061 DGAT2L7PQ6IED9 249 aa10.87□□□□□ -0.67
CBWD3-211ENST00000615061 Q8N1X5 172 aa10.87□□□□□ -0.67
CBWD3-211ENST00000615061 XCL1P47992 114 aa10.86□□□□□ -0.67
CBWD3-211ENST00000615061 RPS10P5Q9NQ39 176 aa10.86□□□□□ -0.67
CBWD3-211ENST00000615061 Q6ZUT4 128 aa10.85□□□□□ -0.67
CBWD3-211ENST00000615061 hDV102S1A0JD36 115 aa10.85□□□□□ -0.67
CBWD3-211ENST00000615061 CCL25O15444 150 aa10.85□□□□□ -0.67
CBWD3-211ENST00000615061 SMR3BP02814 79 aaPredicted RBP10.85□□□□□ -0.67
CBWD3-211ENST00000615061 FOXI1Q12951 378 aa10.85□□□□□ -0.67
CBWD3-211ENST00000615061 KIAA1644Q3SXP7 199 aa10.85□□□□□ -0.67
CBWD3-211ENST00000615061 C15orf56Q8N910 161 aa10.85□□□□□ -0.67
CBWD3-211ENST00000615061 CSDC2Q9Y534 153 aaKnown RBP10.85□□□□□ -0.67
CBWD3-211ENST00000615061 TRAV9-1A0A075B6T8 112 aa10.84□□□□□ -0.67
CBWD3-211ENST00000615061 S100PP25815 95 aa10.84□□□□□ -0.67
CBWD3-211ENST00000615061 RHEBQ15382 184 aa10.84□□□□□ -0.67
CBWD3-211ENST00000615061 Q6ZSA8 131 aa10.84□□□□□ -0.67
CBWD3-211ENST00000615061 FAM104AQ969W3 186 aa10.84□□□□□ -0.67
CBWD3-211ENST00000615061 OPRPNQ99935 248 aaPredicted RBP10.84□□□□□ -0.67
CBWD3-211ENST00000615061 LAMTOR2Q9Y2Q5 125 aa10.84□□□□□ -0.67
CBWD3-211ENST00000615061 SRRM2Q9UQ35 2752 aaKnown RBP10.84□□□□□ -0.67
CBWD3-211ENST00000615061 PRSS47A8MTI9 375 aa10.83□□□□□ -0.68
CBWD3-211ENST00000615061 APOC3P02656 99 aa10.83□□□□□ -0.68
CBWD3-211ENST00000615061 SLPIP03973 132 aa10.83□□□□□ -0.68
CBWD3-211ENST00000615061 TMEM18Q96B42 140 aa10.83□□□□□ -0.68
CBWD3-211ENST00000615061 MAP1LC3AQ9H492 121 aa10.83□□□□□ -0.68
CBWD3-211ENST00000615061 VPS13BQ7Z7G8 4022 aa10.83□□□□□ -0.68
CBWD3-211ENST00000615061 RAB5AP20339 215 aa10.82□□□□□ -0.68
CBWD3-211ENST00000615061 TIMM21Q9BVV7 248 aa10.82□□□□□ -0.68
CBWD3-211ENST00000615061 SS18Q15532 418 aa10.82□□□□□ -0.68
CBWD3-211ENST00000615061 HIGD2BQ4VC39 106 aa10.82□□□□□ -0.68
CBWD3-211ENST00000615061 TRAV13-1A0A0B4J241 112 aa10.81□□□□□ -0.68
CBWD3-211ENST00000615061 SMAGPQ0VAQ4 97 aa10.81□□□□□ -0.68
CBWD3-211ENST00000615061 Q8N8P6 123 aa10.8□□□□□ -0.68
CBWD3-211ENST00000615061 C9orf163Q8N9P6 203 aa10.8□□□□□ -0.68
CBWD3-211ENST00000615061 GNB1LQ9BYB4 327 aa10.8□□□□□ -0.68
CBWD3-211ENST00000615061 CNBPP62633 177 aaKnown RBP10.79□□□□□ -0.68
CBWD3-211ENST00000615061 CD164L2Q6UWJ8 174 aa10.79□□□□□ -0.68
CBWD3-211ENST00000615061 SPANXA1Q9NS26 97 aa10.79□□□□□ -0.68
CBWD3-211ENST00000615061 C1orf196B1AJZ1 125 aa10.78□□□□□ -0.68
CBWD3-211ENST00000615061 IFI27P40305 119 aaPredicted RBP10.78□□□□□ -0.68
CBWD3-211ENST00000615061 CFAP161Q6P656 301 aa10.78□□□□□ -0.68
CBWD3-211ENST00000615061 SCXQ7RTU7 201 aa10.78□□□□□ -0.68
CBWD3-211ENST00000615061 TGIF2-C20orf24A0A0A6YYL0 155 aa10.77□□□□□ -0.68
CBWD3-211ENST00000615061 LINC00526Q96FQ7 95 aa10.77□□□□□ -0.68
CBWD3-211ENST00000615061 AP5S1Q9NUS5 200 aa10.77□□□□□ -0.68
CBWD3-211ENST00000615061 EPM2AB3EWF7 344 aa10.77□□□□□ -0.69
CBWD3-211ENST00000615061 Q5VSD8 79 aa10.77□□□□□ -0.69
CBWD3-211ENST00000615061 SVBPQ8N300 66 aa10.77□□□□□ -0.69
CBWD3-211ENST00000615061 GVQW2A0A096LPI5 108 aaPredicted RBP10.76□□□□□ -0.69
CBWD3-211ENST00000615061 MRPS36P82909 103 aaKnown RBP10.76□□□□□ -0.69
CBWD3-211ENST00000615061 NDUFA5Q16718 116 aa10.76□□□□□ -0.69
CBWD3-211ENST00000615061 FLG2Q5D862 2391 aaPredicted RBP10.75□□□□□ -0.69
CBWD3-211ENST00000615061 PANO1I0J062 215 aa10.75□□□□□ -0.69
CBWD3-211ENST00000615061 SNAPINO95295 136 aa10.75□□□□□ -0.69
CBWD3-211ENST00000615061 C2orf66Q6UXQ4 117 aa10.75□□□□□ -0.69
CBWD3-211ENST00000615061 SDIM1Q6ZPB5 146 aa10.75□□□□□ -0.69
CBWD3-211ENST00000615061 CHAC1Q9BUX1 264 aa10.75□□□□□ -0.69
CBWD3-211ENST00000615061 MRPL18Q9H0U6 180 aaKnown RBP10.75□□□□□ -0.69
CBWD3-211ENST00000615061 NXT2Q9NPJ8 142 aaKnown RBP10.75□□□□□ -0.69
CBWD3-211ENST00000615061 IGLV4-3A0A075B6K6 122 aa10.75□□□□□ -0.69
CBWD3-211ENST00000615061 CIRBP-AS1Q8TBR5 109 aa10.75□□□□□ -0.69
CBWD3-211ENST00000615061 ALKBH7Q9BT30 221 aaPredicted RBP10.75□□□□□ -0.69
CBWD3-211ENST00000615061 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.75□□□□□ -0.69
CBWD3-211ENST00000615061 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.74□□□□□ -0.69
CBWD3-211ENST00000615061 IGHV1-58A0A0C4DH39 117 aa10.74□□□□□ -0.69
CBWD3-211ENST00000615061 IFITM10A6NMD0 228 aa10.74□□□□□ -0.69
CBWD3-211ENST00000615061 FABP9Q0Z7S8 132 aa10.74□□□□□ -0.69
CBWD3-211ENST00000615061 ORMDL2Q53FV1 153 aa10.74□□□□□ -0.69
CBWD3-211ENST00000615061 C5orf38Q86SI9 138 aa10.74□□□□□ -0.69
CBWD3-211ENST00000615061 CYSLTR1Q9Y271 337 aa10.74□□□□□ -0.69
CBWD3-211ENST00000615061 PYGO1Q9Y3Y4 419 aa10.74□□□□□ -0.69
CBWD3-211ENST00000615061 COX19Q49B96 90 aa10.73□□□□□ -0.69
CBWD3-211ENST00000615061 SLC7A5P1Q8MH63 180 aa10.73□□□□□ -0.69
CBWD3-211ENST00000615061 MYCBP2O75592 4640 aa10.73□□□□□ -0.69
CBWD3-211ENST00000615061 COX7A2LO14548 114 aa10.72□□□□□ -0.69
CBWD3-211ENST00000615061 MT-ND6P03923 174 aa10.72□□□□□ -0.69
CBWD3-211ENST00000615061 ZC2HC1BQ5TFG8 222 aa10.72□□□□□ -0.69
CBWD3-211ENST00000615061 IGHV3-64A0A075B6Q5 118 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms