RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 RPL39P62891 51 aaKnown RBP8.19□□□□□ -1.1
CSTF1-208ENST00000613138 PNRC1Q12796 327 aaPredicted RBP8.19□□□□□ -1.1
CSTF1-208ENST00000613138 HIGD2BQ4VC39 106 aa8.19□□□□□ -1.1
CSTF1-208ENST00000613138 CLRN3Q8NCR9 226 aa8.19□□□□□ -1.1
CSTF1-208ENST00000613138 ANAPC16Q96DE5 110 aa8.19□□□□□ -1.1
CSTF1-208ENST00000613138 hDV102S1A0JD36 115 aa8.18□□□□□ -1.1
CSTF1-208ENST00000613138 S100A8P05109 93 aa8.18□□□□□ -1.1
CSTF1-208ENST00000613138 XCL1P47992 114 aa8.18□□□□□ -1.1
CSTF1-208ENST00000613138 SMAGPQ0VAQ4 97 aa8.18□□□□□ -1.1
CSTF1-208ENST00000613138 NDUFA5Q16718 116 aa8.18□□□□□ -1.1
CSTF1-208ENST00000613138 DGAT2L7PQ6IED9 249 aa8.18□□□□□ -1.1
CSTF1-208ENST00000613138 Q6ZUT4 128 aa8.18□□□□□ -1.1
CSTF1-208ENST00000613138 SCXQ7RTU7 201 aa8.18□□□□□ -1.1
CSTF1-208ENST00000613138 OR5A1Q8NGJ0 315 aa8.18□□□□□ -1.1
CSTF1-208ENST00000613138 FAM104AQ969W3 186 aa8.18□□□□□ -1.1
CSTF1-208ENST00000613138 OPRPNQ99935 248 aaPredicted RBP8.18□□□□□ -1.1
CSTF1-208ENST00000613138 SMIM2Q9BVW6 85 aa8.18□□□□□ -1.1
CSTF1-208ENST00000613138 CDC42SE2Q9NRR3 84 aa8.18□□□□□ -1.1
CSTF1-208ENST00000613138 SRRM2Q9UQ35 2752 aaKnown RBP8.17□□□□□ -1.1
CSTF1-208ENST00000613138 TRBV24-1A0A075B6N3 115 aa8.17□□□□□ -1.1
CSTF1-208ENST00000613138 LINC00959A0A1B0GUT2 108 aa8.17□□□□□ -1.1
CSTF1-208ENST00000613138 LINC00862A6NCI5 91 aa8.17□□□□□ -1.1
CSTF1-208ENST00000613138 CCL25O15444 150 aa8.17□□□□□ -1.1
CSTF1-208ENST00000613138 FOXI1Q12951 378 aa8.17□□□□□ -1.1
CSTF1-208ENST00000613138 UQCC3Q6UW78 93 aa8.17□□□□□ -1.1
CSTF1-208ENST00000613138 ATP5L2Q7Z4Y8 100 aa8.17□□□□□ -1.1
CSTF1-208ENST00000613138 LINC00526Q96FQ7 95 aa8.17□□□□□ -1.1
CSTF1-208ENST00000613138 UBE2D4Q9Y2X8 147 aa8.17□□□□□ -1.1
CSTF1-208ENST00000613138 LOC389332A0A1B0GUA5 103 aa8.16□□□□□ -1.1
CSTF1-208ENST00000613138 ZNF25P17030 456 aaPredicted RBP8.16□□□□□ -1.1
CSTF1-208ENST00000613138 CFAP161Q6P656 301 aa8.16□□□□□ -1.1
CSTF1-208ENST00000613138 TMEM136Q6ZRR5 245 aa8.16□□□□□ -1.1
CSTF1-208ENST00000613138 MRPL52Q86TS9 123 aaKnown RBP8.16□□□□□ -1.1
CSTF1-208ENST00000613138 ZNF664Q8N3J9 261 aa8.16□□□□□ -1.1
CSTF1-208ENST00000613138 TMEM101Q96IK0 257 aa8.16□□□□□ -1.1
CSTF1-208ENST00000613138 BTF3L4Q96K17 158 aa8.16□□□□□ -1.1
CSTF1-208ENST00000613138 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
CSTF1-208ENST00000613138 KIR2DL4Q99706 377 aa8.16□□□□□ -1.1
CSTF1-208ENST00000613138 C20orf78Q9BR46 151 aa8.16□□□□□ -1.1
CSTF1-208ENST00000613138 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.16□□□□□ -1.1
CSTF1-208ENST00000613138 ORMDL3Q8N138 153 aa8.15□□□□□ -1.1
CSTF1-208ENST00000613138 RPL32P62910 135 aaKnown RBP8.14□□□□□ -1.11
CSTF1-208ENST00000613138 KIAA1644Q3SXP7 199 aa8.14□□□□□ -1.11
CSTF1-208ENST00000613138 C9orf163Q8N9P6 203 aa8.14□□□□□ -1.11
CSTF1-208ENST00000613138 CIRBP-AS1Q8TBR5 109 aa8.14□□□□□ -1.11
CSTF1-208ENST00000613138 TRAV13-1A0A0B4J241 112 aa8.13□□□□□ -1.11
CSTF1-208ENST00000613138 CHTF8P0CG12 524 aa8.13□□□□□ -1.11
CSTF1-208ENST00000613138 SDIM1Q6ZPB5 146 aa8.13□□□□□ -1.11
CSTF1-208ENST00000613138 CHAC1Q9BUX1 264 aa8.13□□□□□ -1.11
CSTF1-208ENST00000613138 SEC11CQ9BY50 192 aa8.13□□□□□ -1.11
CSTF1-208ENST00000613138 AP5S1Q9NUS5 200 aa8.13□□□□□ -1.11
CSTF1-208ENST00000613138 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.12□□□□□ -1.11
CSTF1-208ENST00000613138 ATP6V1G1O75348 118 aa8.12□□□□□ -1.11
CSTF1-208ENST00000613138 PPBPP02775 128 aa8.12□□□□□ -1.11
CSTF1-208ENST00000613138 ZC2HC1BQ5TFG8 222 aa8.12□□□□□ -1.11
CSTF1-208ENST00000613138 LINC00528Q8N1L1 170 aa8.12□□□□□ -1.11
CSTF1-208ENST00000613138 IMMP2LQ96T52 175 aa8.12□□□□□ -1.11
CSTF1-208ENST00000613138 MYCBP2O75592 4640 aa8.11□□□□□ -1.11
CSTF1-208ENST00000613138 PHOX2AO14813 284 aa8.11□□□□□ -1.11
CSTF1-208ENST00000613138 PLA2G1BP04054 148 aaKnown RBP8.11□□□□□ -1.11
CSTF1-208ENST00000613138 CNBPP62633 177 aaKnown RBP8.11□□□□□ -1.11
CSTF1-208ENST00000613138 SS18Q15532 418 aa8.11□□□□□ -1.11
CSTF1-208ENST00000613138 C10orf91Q5T1B1 145 aa8.11□□□□□ -1.11
CSTF1-208ENST00000613138 TMEM18Q96B42 140 aa8.11□□□□□ -1.11
CSTF1-208ENST00000613138 INAFM2P0DMQ5 153 aa8.1□□□□□ -1.11
CSTF1-208ENST00000613138 C5orf38Q86SI9 138 aa8.1□□□□□ -1.11
CSTF1-208ENST00000613138 CSDC2Q9Y534 153 aaKnown RBP8.1□□□□□ -1.11
CSTF1-208ENST00000613138 PKHD1L1Q86WI1 4243 aa8.09□□□□□ -1.11
CSTF1-208ENST00000613138 GVQW2A0A096LPI5 108 aaPredicted RBP8.09□□□□□ -1.11
CSTF1-208ENST00000613138 CD164L2Q6UWJ8 174 aa8.09□□□□□ -1.11
CSTF1-208ENST00000613138 PRSS3P2Q8NHM4 247 aa8.09□□□□□ -1.11
CSTF1-208ENST00000613138 TIMM21Q9BVV7 248 aa8.09□□□□□ -1.11
CSTF1-208ENST00000613138 CTDSP1Q9GZU7 261 aa8.09□□□□□ -1.11
CSTF1-208ENST00000613138 MAP1LC3AQ9H492 121 aa8.09□□□□□ -1.11
CSTF1-208ENST00000613138 RPS10P5Q9NQ39 176 aa8.09□□□□□ -1.11
CSTF1-208ENST00000613138 CARHSP1Q9Y2V2 147 aaKnown RBP8.09□□□□□ -1.11
CSTF1-208ENST00000613138 PRSS47A8MTI9 375 aa8.08□□□□□ -1.12
CSTF1-208ENST00000613138 IFI27P40305 119 aaPredicted RBP8.08□□□□□ -1.12
CSTF1-208ENST00000613138 KRTAP10-4P60372 401 aaPredicted RBP8.08□□□□□ -1.12
CSTF1-208ENST00000613138 COX6A2Q02221 97 aa8.08□□□□□ -1.12
CSTF1-208ENST00000613138 SLC7A5P1Q8MH63 180 aa8.08□□□□□ -1.12
CSTF1-208ENST00000613138 PKIGQ9Y2B9 76 aa8.08□□□□□ -1.12
CSTF1-208ENST00000613138 IGHV3-64A0A075B6Q5 118 aa8.07□□□□□ -1.12
CSTF1-208ENST00000613138 RAB5AP20339 215 aa8.07□□□□□ -1.12
CSTF1-208ENST00000613138 Q8N8P6 123 aa8.07□□□□□ -1.12
CSTF1-208ENST00000613138 IGLV4-3A0A075B6K6 122 aa8.06□□□□□ -1.12
CSTF1-208ENST00000613138 IGHV1-58A0A0C4DH39 117 aa8.06□□□□□ -1.12
CSTF1-208ENST00000613138 C1orf196B1AJZ1 125 aa8.06□□□□□ -1.12
CSTF1-208ENST00000613138 SPANXA1Q9NS26 97 aa8.06□□□□□ -1.12
CSTF1-208ENST00000613138 IGLV4-69A0A075B6H9 119 aa8.05□□□□□ -1.12
CSTF1-208ENST00000613138 TGIF2-C20orf24A0A0A6YYL0 155 aa8.05□□□□□ -1.12
CSTF1-208ENST00000613138 IGKV2-24A0A0C4DH68 120 aa8.05□□□□□ -1.12
CSTF1-208ENST00000613138 IFITM10A6NMD0 228 aa8.05□□□□□ -1.12
CSTF1-208ENST00000613138 COX7A2LO14548 114 aa8.05□□□□□ -1.12
CSTF1-208ENST00000613138 APOC3P02656 99 aa8.05□□□□□ -1.12
CSTF1-208ENST00000613138 S100A1P23297 94 aa8.05□□□□□ -1.12
CSTF1-208ENST00000613138 MRPS36P82909 103 aaKnown RBP8.05□□□□□ -1.12
CSTF1-208ENST00000613138 C2orf66Q6UXQ4 117 aa8.05□□□□□ -1.12
CSTF1-208ENST00000613138 LINC00173Q6ZV60 143 aa8.05□□□□□ -1.12
CSTF1-208ENST00000613138 LAMTOR2Q9Y2Q5 125 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms