RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 M0QXV9 152 aa12.05□□□□□ -0.48
CNOT3-208ENST00000613073 ZNF22P17026 224 aaPredicted RBP12.05□□□□□ -0.48
CNOT3-208ENST00000613073 HIVEP2P31629 2446 aa12.05□□□□□ -0.48
CNOT3-208ENST00000613073 A0A0B4J2C4 111 aa12.05□□□□□ -0.48
CNOT3-208ENST00000613073 H7C423 109 aa12.05□□□□□ -0.48
CNOT3-208ENST00000613073 PRM2P04554 102 aa12.05□□□□□ -0.48
CNOT3-208ENST00000613073 RPL13AP40429 203 aaKnown RBP12.05□□□□□ -0.48
CNOT3-208ENST00000613073 KIF25-AS1Q9Y6Z4 181 aa12.05□□□□□ -0.48
CNOT3-208ENST00000613073 NXPH4O95158 308 aa12.04□□□□□ -0.48
CNOT3-208ENST00000613073 RBMY1A1P0DJD3 496 aaKnown RBP12.04□□□□□ -0.48
CNOT3-208ENST00000613073 RBMY1CP0DJD4 496 aa12.04□□□□□ -0.48
CNOT3-208ENST00000613073 LINC00315P59091 139 aa12.04□□□□□ -0.48
CNOT3-208ENST00000613073 RBMY1FQ15415 496 aaKnown RBP12.04□□□□□ -0.48
CNOT3-208ENST00000613073 ZNF876PQ49A33 203 aa12.04□□□□□ -0.48
CNOT3-208ENST00000613073 SETXQ7Z333 2677 aaKnown RBP12.04□□□□□ -0.48
CNOT3-208ENST00000613073 FAM236AA0A1B0GUQ0 79 aa12.04□□□□□ -0.48
CNOT3-208ENST00000613073 FAM236BA0A1B0GV22 79 aa12.04□□□□□ -0.48
CNOT3-208ENST00000613073 SDHAF1A6NFY7 115 aa12.04□□□□□ -0.48
CNOT3-208ENST00000613073 NOTCH3Q9UM47 2321 aa12.03□□□□□ -0.48
CNOT3-208ENST00000613073 DEFB114Q30KQ6 69 aa12.03□□□□□ -0.48
CNOT3-208ENST00000613073 LINC01587Q99440 93 aa12.03□□□□□ -0.48
CNOT3-208ENST00000613073 CITED2Q99967 270 aaPredicted RBP12.03□□□□□ -0.48
CNOT3-208ENST00000613073 JMJD1CQ15652 2540 aa12.03□□□□□ -0.48
CNOT3-208ENST00000613073 SUMO4Q6EEV6 95 aa12.03□□□□□ -0.48
CNOT3-208ENST00000613073 CEMP1Q6PRD7 247 aaPredicted RBP12.03□□□□□ -0.48
CNOT3-208ENST00000613073 RBMY1BA6NDE4 496 aaKnown RBP12.02□□□□□ -0.48
CNOT3-208ENST00000613073 RBMY1EA6NEQ0 496 aaKnown RBP12.02□□□□□ -0.48
CNOT3-208ENST00000613073 RBMY1DP0C7P1 496 aaKnown RBP12.02□□□□□ -0.48
CNOT3-208ENST00000613073 C9orf85Q96MD7 179 aa12.02□□□□□ -0.48
CNOT3-208ENST00000613073 TRGV11A0A075B6L2 103 aa12.02□□□□□ -0.49
CNOT3-208ENST00000613073 LINC01006Q8NI28 216 aa12.02□□□□□ -0.49
CNOT3-208ENST00000613073 A0A0J9YXV3 536 aa12.01□□□□□ -0.49
CNOT3-208ENST00000613073 LOC107984640A0A0U1RRK4 108 aa12.01□□□□□ -0.49
CNOT3-208ENST00000613073 CCL24O00175 119 aa12.01□□□□□ -0.49
CNOT3-208ENST00000613073 MAP6D1Q9H9H5 199 aa12.01□□□□□ -0.49
CNOT3-208ENST00000613073 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.01□□□□□ -0.49
CNOT3-208ENST00000613073 LINC00694P0DN24 101 aa12.01□□□□□ -0.49
CNOT3-208ENST00000613073 SPXQ9BT56 116 aa12.01□□□□□ -0.49
CNOT3-208ENST00000613073 ICOSQ9Y6W8 199 aa12.01□□□□□ -0.49
CNOT3-208ENST00000613073 TMEM223A0PJW6 202 aa12.01□□□□□ -0.49
CNOT3-208ENST00000613073 TMEM141Q96I45 108 aa12.01□□□□□ -0.49
CNOT3-208ENST00000613073 TRAV8-3A0A0A6YYJ7 113 aa12□□□□□ -0.49
CNOT3-208ENST00000613073 LEPROTO15243 131 aa12□□□□□ -0.49
CNOT3-208ENST00000613073 POLR2KP53803 58 aaKnown RBP12□□□□□ -0.49
CNOT3-208ENST00000613073 MRPL23Q16540 153 aaKnown RBP12□□□□□ -0.49
CNOT3-208ENST00000613073 KLK5Q9Y337 293 aaPredicted RBP12□□□□□ -0.49
CNOT3-208ENST00000613073 A0A0J9YXY3 114 aa12□□□□□ -0.49
CNOT3-208ENST00000613073 TIMM17AQ99595 171 aa12□□□□□ -0.49
CNOT3-208ENST00000613073 OTOGQ6ZRI0 2925 aa11.99□□□□□ -0.49
CNOT3-208ENST00000613073 VCYO14598 125 aa11.99□□□□□ -0.49
CNOT3-208ENST00000613073 TRBV30A0A0K0K1B3 111 aa11.99□□□□□ -0.49
CNOT3-208ENST00000613073 M0R2P5 195 aa11.99□□□□□ -0.49
CNOT3-208ENST00000613073 PPP1R17O96001 155 aa11.98□□□□□ -0.49
CNOT3-208ENST00000613073 RNASE1P07998 156 aaKnown RBP11.98□□□□□ -0.49
CNOT3-208ENST00000613073 A8MZ25 164 aa11.98□□□□□ -0.49
CNOT3-208ENST00000613073 C9orf153Q5TBE3 101 aa11.98□□□□□ -0.49
CNOT3-208ENST00000613073 POM121L12Q8N7R1 296 aa11.98□□□□□ -0.49
CNOT3-208ENST00000613073 RNASE13Q5GAN3 156 aaKnown RBP11.97□□□□□ -0.49
CNOT3-208ENST00000613073 ADAMTSL4-AS1Q5T5F5 129 aa11.97□□□□□ -0.49
CNOT3-208ENST00000613073 IGHV3-73A0A0B4J1V6 119 aa11.96□□□□□ -0.49
CNOT3-208ENST00000613073 DAND5Q8N907 189 aa11.96□□□□□ -0.49
CNOT3-208ENST00000613073 TMEM126AQ9H061 195 aa11.96□□□□□ -0.49
CNOT3-208ENST00000613073 TMEM101Q96IK0 257 aa11.96□□□□□ -0.5
CNOT3-208ENST00000613073 COX6CP09669 75 aa11.95□□□□□ -0.5
CNOT3-208ENST00000613073 IGHV3-30-3P0DP02 117 aa11.95□□□□□ -0.5
CNOT3-208ENST00000613073 ODF3L2Q3SX64 289 aa11.95□□□□□ -0.5
CNOT3-208ENST00000613073 H3BT86 120 aa11.94□□□□□ -0.5
CNOT3-208ENST00000613073 A8MTW9 85 aa11.93□□□□□ -0.5
CNOT3-208ENST00000613073 I3L3M4 83 aa11.93□□□□□ -0.5
CNOT3-208ENST00000613073 NSUN5P1Q3KNT7 163 aa11.93□□□□□ -0.5
CNOT3-208ENST00000613073 XCL2Q9UBD3 114 aa11.93□□□□□ -0.5
CNOT3-208ENST00000613073 M0QY20 66 aa11.93□□□□□ -0.5
CNOT3-208ENST00000613073 HILS1P60008 231 aa11.93□□□□□ -0.5
CNOT3-208ENST00000613073 C16orf95Q9H693 158 aa11.93□□□□□ -0.5
CNOT3-208ENST00000613073 TRBV7-7A0A0K0K1E9 115 aa11.92□□□□□ -0.5
CNOT3-208ENST00000613073 CSDC2Q9Y534 153 aaKnown RBP11.92□□□□□ -0.5
CNOT3-208ENST00000613073 FN1P02751 2386 aaKnown RBP11.92□□□□□ -0.5
CNOT3-208ENST00000613073 PROK1P58294 105 aa11.92□□□□□ -0.5
CNOT3-208ENST00000613073 LITAFQ99732 161 aa11.92□□□□□ -0.5
CNOT3-208ENST00000613073 TIMM21Q9BVV7 248 aa11.92□□□□□ -0.5
CNOT3-208ENST00000613073 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
CNOT3-208ENST00000613073 SMCR5Q8TEV8 140 aa11.91□□□□□ -0.5
CNOT3-208ENST00000613073 LST1O00453 97 aa11.91□□□□□ -0.5
CNOT3-208ENST00000613073 HERVK_113P63121 156 aa11.91□□□□□ -0.5
CNOT3-208ENST00000613073 SPANXA1Q9NS26 97 aa11.91□□□□□ -0.5
CNOT3-208ENST00000613073 TRBV27A0A0K0K1C4 114 aa11.9□□□□□ -0.5
CNOT3-208ENST00000613073 LY6G6DO95868 133 aa11.9□□□□□ -0.5
CNOT3-208ENST00000613073 STHQ8IWL8 128 aa11.9□□□□□ -0.5
CNOT3-208ENST00000613073 A0A0U1RRA0 63 aa11.9□□□□□ -0.51
CNOT3-208ENST00000613073 NDUFA7O95182 113 aa11.9□□□□□ -0.51
CNOT3-208ENST00000613073 NDUFA12Q9UI09 145 aa11.9□□□□□ -0.51
CNOT3-208ENST00000613073 IGLV4-3A0A075B6K6 122 aa11.89□□□□□ -0.51
CNOT3-208ENST00000613073 FAM240AA0A1B0GVK7 77 aa11.89□□□□□ -0.51
CNOT3-208ENST00000613073 INSP01308 110 aa11.89□□□□□ -0.51
CNOT3-208ENST00000613073 TRAV25A0A0B4J276 109 aa11.88□□□□□ -0.51
CNOT3-208ENST00000613073 C3orf22Q8N5N4 141 aa11.88□□□□□ -0.51
CNOT3-208ENST00000613073 RS1O15537 224 aa11.88□□□□□ -0.51
CNOT3-208ENST00000613073 LINC01600Q96MT4 127 aa11.88□□□□□ -0.51
CNOT3-208ENST00000613073 WFDC10AQ9H1F0 79 aa11.88□□□□□ -0.51
CNOT3-208ENST00000613073 TRBV6-5A0A0K0K1A5 114 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms