RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 H2AFB1P0C5Y9 115 aa10.38□□□□□ -0.75
CSNK1E-215ENST00000612795 PMCHP20382 165 aa10.38□□□□□ -0.75
CSNK1E-215ENST00000612795 MEF2BQ02080 365 aaPredicted RBP10.38□□□□□ -0.75
CSNK1E-215ENST00000612795 SMIM15Q7Z3B0 74 aa10.38□□□□□ -0.75
CSNK1E-215ENST00000612795 C9orf62Q8N4C0 152 aa10.38□□□□□ -0.75
CSNK1E-215ENST00000612795 SMIM12Q96EX1 92 aa10.38□□□□□ -0.75
CSNK1E-215ENST00000612795 MRAP2Q96G30 205 aa10.38□□□□□ -0.75
CSNK1E-215ENST00000612795 A0A087WZ39 114 aa10.37□□□□□ -0.75
CSNK1E-215ENST00000612795 TRAV1-1A0A0B4J248 108 aa10.37□□□□□ -0.75
CSNK1E-215ENST00000612795 COX7A2LO14548 114 aa10.37□□□□□ -0.75
CSNK1E-215ENST00000612795 LCE2AQ5TA79 106 aaPredicted RBP10.37□□□□□ -0.75
CSNK1E-215ENST00000612795 TSKUQ8WUA8 353 aa10.37□□□□□ -0.75
CSNK1E-215ENST00000612795 MANBALQ9NQG1 85 aa10.37□□□□□ -0.75
CSNK1E-215ENST00000612795 GNG13Q9P2W3 67 aa10.37□□□□□ -0.75
CSNK1E-215ENST00000612795 RAB19A4D1S5 217 aa10.36□□□□□ -0.75
CSNK1E-215ENST00000612795 BCL2L11O43521 198 aa10.36□□□□□ -0.75
CSNK1E-215ENST00000612795 TEX261Q6UWH6 196 aa10.36□□□□□ -0.75
CSNK1E-215ENST00000612795 CNFNQ9BYD5 112 aa10.36□□□□□ -0.75
CSNK1E-215ENST00000612795 BIN3Q9NQY0 253 aa10.36□□□□□ -0.75
CSNK1E-215ENST00000612795 RPL13AP40429 203 aaKnown RBP10.35□□□□□ -0.75
CSNK1E-215ENST00000612795 CCL20P78556 96 aa10.35□□□□□ -0.75
CSNK1E-215ENST00000612795 CDC42SE2Q9NRR3 84 aa10.35□□□□□ -0.75
CSNK1E-215ENST00000612795 G3V3Q6 166 aa10.34□□□□□ -0.75
CSNK1E-215ENST00000612795 KRTAP1-4P0C5Y4 121 aa10.34□□□□□ -0.75
CSNK1E-215ENST00000612795 ESDP10768 282 aa10.34□□□□□ -0.75
CSNK1E-215ENST00000612795 C2orf48Q96LS8 159 aa10.34□□□□□ -0.75
CSNK1E-215ENST00000612795 OPRPNQ99935 248 aaPredicted RBP10.34□□□□□ -0.75
CSNK1E-215ENST00000612795 TMEM242Q9NWH2 141 aa10.34□□□□□ -0.75
CSNK1E-215ENST00000612795 MRPL52Q86TS9 123 aaKnown RBP10.33□□□□□ -0.76
CSNK1E-215ENST00000612795 C1orf196B1AJZ1 125 aa10.32□□□□□ -0.76
CSNK1E-215ENST00000612795 TSHBP01222 138 aa10.32□□□□□ -0.76
CSNK1E-215ENST00000612795 SPAG11BQ08648 103 aa10.32□□□□□ -0.76
CSNK1E-215ENST00000612795 NUDT10Q8NFP7 164 aa10.32□□□□□ -0.76
CSNK1E-215ENST00000612795 NUDT11Q96G61 164 aa10.32□□□□□ -0.76
CSNK1E-215ENST00000612795 C7orf77A4D0Y5 90 aa10.31□□□□□ -0.76
CSNK1E-215ENST00000612795 FOXA3P55318 350 aaPredicted RBP10.31□□□□□ -0.76
CSNK1E-215ENST00000612795 RPP21Q9H633 154 aaKnown RBP10.31□□□□□ -0.76
CSNK1E-215ENST00000612795 ST20Q9HBF5 79 aa10.31□□□□□ -0.76
CSNK1E-215ENST00000612795 TRBV20OR9-2A0A075B6H5 130 aa10.3□□□□□ -0.76
CSNK1E-215ENST00000612795 TRBV6-5A0A0K0K1A5 114 aa10.3□□□□□ -0.76
CSNK1E-215ENST00000612795 FAM19A5Q7Z5A7 132 aaPredicted RBP10.3□□□□□ -0.76
CSNK1E-215ENST00000612795 KRTAP11-1Q8IUC1 163 aa10.3□□□□□ -0.76
CSNK1E-215ENST00000612795 FAM168BA1KXE4 195 aa10.29□□□□□ -0.76
CSNK1E-215ENST00000612795 RNF151Q2KHN1 245 aa10.29□□□□□ -0.76
CSNK1E-215ENST00000612795 C5orf38Q86SI9 138 aa10.29□□□□□ -0.76
CSNK1E-215ENST00000612795 MED9Q9NWA0 146 aa10.29□□□□□ -0.76
CSNK1E-215ENST00000612795 TRAV13-1A0A0B4J241 112 aa10.28□□□□□ -0.76
CSNK1E-215ENST00000612795 PDE6DO43924 150 aa10.28□□□□□ -0.76
CSNK1E-215ENST00000612795 UBE2BP63146 152 aa10.28□□□□□ -0.76
CSNK1E-215ENST00000612795 ZNF345Q14585 488 aa10.28□□□□□ -0.76
CSNK1E-215ENST00000612795 RNASE13Q5GAN3 156 aaKnown RBP10.28□□□□□ -0.76
CSNK1E-215ENST00000612795 FAM210AQ96ND0 272 aa10.28□□□□□ -0.76
CSNK1E-215ENST00000612795 IMMP2LQ96T52 175 aa10.28□□□□□ -0.76
CSNK1E-215ENST00000612795 RNASE7Q9H1E1 156 aaKnown RBP10.28□□□□□ -0.76
CSNK1E-215ENST00000612795 TSPAN13O95857 204 aa10.27□□□□□ -0.77
CSNK1E-215ENST00000612795 KANTRA0A1W2PQU2 76 aa10.26□□□□□ -0.77
CSNK1E-215ENST00000612795 SMLR1H3BR10 107 aa10.26□□□□□ -0.77
CSNK1E-215ENST00000612795 TEX46H3BTG2 121 aa10.26□□□□□ -0.77
CSNK1E-215ENST00000612795 SMAGPQ0VAQ4 97 aa10.26□□□□□ -0.77
CSNK1E-215ENST00000612795 MRPL35Q9NZE8 188 aaKnown RBP10.26□□□□□ -0.77
CSNK1E-215ENST00000612795 OR10D4PQ8NGN7 298 aa10.25□□□□□ -0.77
CSNK1E-215ENST00000612795 CARHSP1Q9Y2V2 147 aaKnown RBP10.25□□□□□ -0.77
CSNK1E-215ENST00000612795 M0QXV9 152 aa10.24□□□□□ -0.77
CSNK1E-215ENST00000612795 NDUFA1O15239 70 aa10.24□□□□□ -0.77
CSNK1E-215ENST00000612795 FCER1GP30273 86 aa10.24□□□□□ -0.77
CSNK1E-215ENST00000612795 ORAOV1Q8WV07 137 aa10.24□□□□□ -0.77
CSNK1E-215ENST00000612795 TRBV27A0A0K0K1C4 114 aa10.23□□□□□ -0.77
CSNK1E-215ENST00000612795 GAGE2EQ4V326 116 aa10.23□□□□□ -0.77
CSNK1E-215ENST00000612795 GAGE2DQ9UEU5 116 aa10.23□□□□□ -0.77
CSNK1E-215ENST00000612795 POLR2KP53803 58 aaKnown RBP10.22□□□□□ -0.77
CSNK1E-215ENST00000612795 BORCS7Q96B45 105 aa10.22□□□□□ -0.77
CSNK1E-215ENST00000612795 UBE2D4Q9Y2X8 147 aa10.22□□□□□ -0.77
CSNK1E-215ENST00000612795 CSDC2Q9Y534 153 aaKnown RBP10.22□□□□□ -0.77
CSNK1E-215ENST00000612795 F8WDY8 70 aa10.21□□□□□ -0.77
CSNK1E-215ENST00000612795 K7EN84 100 aa10.21□□□□□ -0.77
CSNK1E-215ENST00000612795 TLX1NBP0CAT3 122 aa10.21□□□□□ -0.77
CSNK1E-215ENST00000612795 Q6ZUT4 128 aa10.21□□□□□ -0.77
CSNK1E-215ENST00000612795 GATCO43716 136 aaKnown RBP10.19□□□□□ -0.78
CSNK1E-215ENST00000612795 C10orf25Q5T742 122 aa10.19□□□□□ -0.78
CSNK1E-215ENST00000612795 OCC1Q8TAD7 63 aa10.19□□□□□ -0.78
CSNK1E-215ENST00000612795 SMDT1Q9H4I9 107 aa10.19□□□□□ -0.78
CSNK1E-215ENST00000612795 A8MWL6 223 aa10.18□□□□□ -0.78
CSNK1E-215ENST00000612795 VCYO14598 125 aa10.18□□□□□ -0.78
CSNK1E-215ENST00000612795 TMEM241Q24JQ0 296 aa10.18□□□□□ -0.78
CSNK1E-215ENST00000612795 C6orf48Q9UBA6 75 aa10.18□□□□□ -0.78
CSNK1E-215ENST00000612795 HMSDA8MTL9 139 aa10.17□□□□□ -0.78
CSNK1E-215ENST00000612795 UNQ6190/PRO20217Q6UXQ8 127 aa10.17□□□□□ -0.78
CSNK1E-215ENST00000612795 KRTAP7-1Q8IUC3 87 aa10.17□□□□□ -0.78
CSNK1E-215ENST00000612795 KIR2DL4Q99706 377 aa10.17□□□□□ -0.78
CSNK1E-215ENST00000612795 ZNF861PO60384 105 aa10.16□□□□□ -0.78
CSNK1E-215ENST00000612795 TMEM18Q96B42 140 aa10.16□□□□□ -0.78
CSNK1E-215ENST00000612795 TMEM191AQ9H0A3 160 aa10.16□□□□□ -0.78
CSNK1E-215ENST00000612795 MUC17Q685J3 4493 aa10.15□□□□□ -0.78
CSNK1E-215ENST00000612795 RAB4AP20338 218 aa10.15□□□□□ -0.78
CSNK1E-215ENST00000612795 AMN1Q8IY45 258 aa10.15□□□□□ -0.78
CSNK1E-215ENST00000612795 SMKR1H3BMG3 65 aa10.14□□□□□ -0.79
CSNK1E-215ENST00000612795 SUMO2P61956 95 aaKnown RBP10.14□□□□□ -0.79
CSNK1E-215ENST00000612795 TIMM21Q9BVV7 248 aa10.14□□□□□ -0.79
CSNK1E-215ENST00000612795 IGHV3OR16-9A0A0B4J2B5 98 aa10.13□□□□□ -0.79
CSNK1E-215ENST00000612795 A0A1B0GUT8 65 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms