RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 PRELID3AQ96N28 172 aa17.01■□□□□ 0.31
VEGFA-226ENST00000611736 MRPL52Q86TS9 123 aaKnown RBP17■□□□□ 0.31
VEGFA-226ENST00000611736 GAGE12HA6NDE8 117 aa16.99■□□□□ 0.31
VEGFA-226ENST00000611736 PRSS1P07477 247 aa16.99■□□□□ 0.31
VEGFA-226ENST00000611736 HAMPP81172 84 aa16.98■□□□□ 0.31
VEGFA-226ENST00000611736 C10orf91Q5T1B1 145 aa16.98■□□□□ 0.31
VEGFA-226ENST00000611736 DGAT2L7PQ6IED9 249 aa16.97■□□□□ 0.31
VEGFA-226ENST00000611736 CHCHD10Q8WYQ3 142 aaPredicted RBP16.97■□□□□ 0.31
VEGFA-226ENST00000611736 CDC42SE2Q9NRR3 84 aa16.97■□□□□ 0.31
VEGFA-226ENST00000611736 FAT1Q14517 4588 aa16.97■□□□□ 0.31
VEGFA-226ENST00000611736 TCAPO15273 167 aa16.96■□□□□ 0.31
VEGFA-226ENST00000611736 ZNF664Q8N3J9 261 aa16.96■□□□□ 0.31
VEGFA-226ENST00000611736 FAM30AQ9NZY2 134 aa16.96■□□□□ 0.31
VEGFA-226ENST00000611736 CARHSP1Q9Y2V2 147 aaKnown RBP16.96■□□□□ 0.31
VEGFA-226ENST00000611736 SMAGPQ0VAQ4 97 aa16.95■□□□□ 0.3
VEGFA-226ENST00000611736 KRTAP4-5Q9BYR2 181 aa16.95■□□□□ 0.3
VEGFA-226ENST00000611736 UBE2D4Q9Y2X8 147 aa16.95■□□□□ 0.3
VEGFA-226ENST00000611736 ABCA13Q86UQ4 5058 aa16.94■□□□□ 0.3
VEGFA-226ENST00000611736 Q8N1X5 172 aa16.94■□□□□ 0.3
VEGFA-226ENST00000611736 TMEM18Q96B42 140 aa16.94■□□□□ 0.3
VEGFA-226ENST00000611736 LOC389332A0A1B0GUA5 103 aa16.93■□□□□ 0.3
VEGFA-226ENST00000611736 LINC00959A0A1B0GUT2 108 aa16.93■□□□□ 0.3
VEGFA-226ENST00000611736 CLRN3Q8NCR9 226 aa16.93■□□□□ 0.3
VEGFA-226ENST00000611736 TRAV9-1A0A075B6T8 112 aa16.92■□□□□ 0.3
VEGFA-226ENST00000611736 hDV102S1A0JD36 115 aa16.92■□□□□ 0.3
VEGFA-226ENST00000611736 S100PP25815 95 aa16.92■□□□□ 0.3
VEGFA-226ENST00000611736 XCL1P47992 114 aa16.92■□□□□ 0.3
VEGFA-226ENST00000611736 RPL39P62891 51 aaKnown RBP16.92■□□□□ 0.3
VEGFA-226ENST00000611736 RNASE13Q5GAN3 156 aaKnown RBP16.92■□□□□ 0.3
VEGFA-226ENST00000611736 MAP1LC3AQ9H492 121 aa16.92■□□□□ 0.3
VEGFA-226ENST00000611736 LAMTOR2Q9Y2Q5 125 aa16.92■□□□□ 0.3
VEGFA-226ENST00000611736 CSDC2Q9Y534 153 aaKnown RBP16.92■□□□□ 0.3
VEGFA-226ENST00000611736 RPS10P5Q9NQ39 176 aa16.91■□□□□ 0.3
VEGFA-226ENST00000611736 CCL25O15444 150 aa16.9■□□□□ 0.3
VEGFA-226ENST00000611736 RAB5AP20339 215 aa16.9■□□□□ 0.3
VEGFA-226ENST00000611736 RHEBQ15382 184 aa16.9■□□□□ 0.3
VEGFA-226ENST00000611736 Q6ZUT4 128 aa16.9■□□□□ 0.3
VEGFA-226ENST00000611736 FOXI1Q12951 378 aa16.89■□□□□ 0.29
VEGFA-226ENST00000611736 SS18Q15532 418 aa16.89■□□□□ 0.29
VEGFA-226ENST00000611736 TIMM21Q9BVV7 248 aa16.89■□□□□ 0.29
VEGFA-226ENST00000611736 CFAP161Q6P656 301 aa16.88■□□□□ 0.29
VEGFA-226ENST00000611736 Q6ZSA8 131 aa16.88■□□□□ 0.29
VEGFA-226ENST00000611736 C15orf56Q8N910 161 aa16.88■□□□□ 0.29
VEGFA-226ENST00000611736 PRSS47A8MTI9 375 aa16.86■□□□□ 0.29
VEGFA-226ENST00000611736 SMR3BP02814 79 aaPredicted RBP16.86■□□□□ 0.29
VEGFA-226ENST00000611736 KIAA1644Q3SXP7 199 aa16.86■□□□□ 0.29
VEGFA-226ENST00000611736 AP5S1Q9NUS5 200 aa16.86■□□□□ 0.29
VEGFA-226ENST00000611736 APOC3P02656 99 aa16.85■□□□□ 0.29
VEGFA-226ENST00000611736 HIGD2BQ4VC39 106 aa16.85■□□□□ 0.29
VEGFA-226ENST00000611736 SPANXA1Q9NS26 97 aa16.85■□□□□ 0.29
VEGFA-226ENST00000611736 TRAV13-1A0A0B4J241 112 aa16.84■□□□□ 0.29
VEGFA-226ENST00000611736 Q8N8P6 123 aa16.84■□□□□ 0.29
VEGFA-226ENST00000611736 CNBPP62633 177 aaKnown RBP16.83■□□□□ 0.28
VEGFA-226ENST00000611736 VPS13BQ7Z7G8 4022 aa16.83■□□□□ 0.28
VEGFA-226ENST00000611736 C9orf163Q8N9P6 203 aa16.83■□□□□ 0.28
VEGFA-226ENST00000611736 OPRPNQ99935 248 aaPredicted RBP16.83■□□□□ 0.28
VEGFA-226ENST00000611736 NDUFA5Q16718 116 aa16.82■□□□□ 0.28
VEGFA-226ENST00000611736 CD164L2Q6UWJ8 174 aa16.82■□□□□ 0.28
VEGFA-226ENST00000611736 C1orf196B1AJZ1 125 aa16.81■□□□□ 0.28
VEGFA-226ENST00000611736 EPM2AB3EWF7 344 aa16.81■□□□□ 0.28
VEGFA-226ENST00000611736 SLPIP03973 132 aa16.81■□□□□ 0.28
VEGFA-226ENST00000611736 FAM104AQ969W3 186 aa16.81■□□□□ 0.28
VEGFA-226ENST00000611736 GNB1LQ9BYB4 327 aa16.81■□□□□ 0.28
VEGFA-226ENST00000611736 SVBPQ8N300 66 aa16.79■□□□□ 0.28
VEGFA-226ENST00000611736 GVQW2A0A096LPI5 108 aaPredicted RBP16.78■□□□□ 0.28
VEGFA-226ENST00000611736 IFI27P40305 119 aaPredicted RBP16.78■□□□□ 0.28
VEGFA-226ENST00000611736 MRPS36P82909 103 aaKnown RBP16.78■□□□□ 0.28
VEGFA-226ENST00000611736 Q5VSD8 79 aa16.78■□□□□ 0.28
VEGFA-226ENST00000611736 SCXQ7RTU7 201 aa16.78■□□□□ 0.28
VEGFA-226ENST00000611736 NXT2Q9NPJ8 142 aaKnown RBP16.78■□□□□ 0.28
VEGFA-226ENST00000611736 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-226ENST00000611736 IGHV1-58A0A0C4DH39 117 aa16.77■□□□□ 0.28
VEGFA-226ENST00000611736 SNAPINO95295 136 aa16.77■□□□□ 0.28
VEGFA-226ENST00000611736 COX19Q49B96 90 aa16.77■□□□□ 0.28
VEGFA-226ENST00000611736 CHAC1Q9BUX1 264 aa16.77■□□□□ 0.28
VEGFA-226ENST00000611736 ORMDL2Q53FV1 153 aa16.76■□□□□ 0.27
VEGFA-226ENST00000611736 IFITM10A6NMD0 228 aa16.75■□□□□ 0.27
VEGFA-226ENST00000611736 COX7A2LO14548 114 aa16.75■□□□□ 0.27
VEGFA-226ENST00000611736 MRPL18Q9H0U6 180 aaKnown RBP16.75■□□□□ 0.27
VEGFA-226ENST00000611736 CYSLTR1Q9Y271 337 aa16.75■□□□□ 0.27
VEGFA-226ENST00000611736 IGHV3-64A0A075B6Q5 118 aa16.74■□□□□ 0.27
VEGFA-226ENST00000611736 TGIF2-C20orf24A0A0A6YYL0 155 aa16.74■□□□□ 0.27
VEGFA-226ENST00000611736 MT-ND6P03923 174 aa16.74■□□□□ 0.27
VEGFA-226ENST00000611736 FABP9Q0Z7S8 132 aa16.74■□□□□ 0.27
VEGFA-226ENST00000611736 C2orf66Q6UXQ4 117 aa16.74■□□□□ 0.27
VEGFA-226ENST00000611736 SDIM1Q6ZPB5 146 aa16.74■□□□□ 0.27
VEGFA-226ENST00000611736 LINC00526Q96FQ7 95 aa16.74■□□□□ 0.27
VEGFA-226ENST00000611736 PYGO1Q9Y3Y4 419 aa16.74■□□□□ 0.27
VEGFA-226ENST00000611736 IGLV4-3A0A075B6K6 122 aa16.73■□□□□ 0.27
VEGFA-226ENST00000611736 MALP21145 153 aa16.73■□□□□ 0.27
VEGFA-226ENST00000611736 ALKBH7Q9BT30 221 aaPredicted RBP16.73■□□□□ 0.27
VEGFA-226ENST00000611736 SRRM2Q9UQ35 2752 aaKnown RBP16.73■□□□□ 0.27
VEGFA-226ENST00000611736 FAM229AH3BQW9 127 aa16.72■□□□□ 0.27
VEGFA-226ENST00000611736 K7EMI3 77 aa16.72■□□□□ 0.27
VEGFA-226ENST00000611736 C5orf38Q86SI9 138 aa16.72■□□□□ 0.27
VEGFA-226ENST00000611736 CIRBP-AS1Q8TBR5 109 aa16.72■□□□□ 0.27
VEGFA-226ENST00000611736 TMEM141Q96I45 108 aa16.71■□□□□ 0.27
VEGFA-226ENST00000611736 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.71■□□□□ 0.27
VEGFA-226ENST00000611736 PRSS3P2Q8NHM4 247 aa16.7■□□□□ 0.26
VEGFA-226ENST00000611736 PANO1I0J062 215 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms