RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 CDK2AP2O75956 126 aa8.41□□□□□ -1.06
CD9-212ENST00000610354 RIGQ13278 110 aa8.41□□□□□ -1.06
CD9-212ENST00000610354 COA6Q5JTJ3 125 aaKnown RBP8.41□□□□□ -1.06
CD9-212ENST00000610354 CDPF1Q6NVV7 123 aa8.41□□□□□ -1.06
CD9-212ENST00000610354 KRTAP26-1Q6PEX3 210 aa8.41□□□□□ -1.06
CD9-212ENST00000610354 C20orf203Q8NBC4 194 aa8.41□□□□□ -1.06
CD9-212ENST00000610354 TMEM243Q9BU79 118 aa8.41□□□□□ -1.06
CD9-212ENST00000610354 PRR34Q9NV39 138 aa8.41□□□□□ -1.06
CD9-212ENST00000610354 SDHAF1A6NFY7 115 aa8.4□□□□□ -1.06
CD9-212ENST00000610354 SMKR1H3BMG3 65 aa8.4□□□□□ -1.06
CD9-212ENST00000610354 COTL1Q14019 142 aa8.4□□□□□ -1.06
CD9-212ENST00000610354 TRAV9-1A0A075B6T8 112 aa8.39□□□□□ -1.07
CD9-212ENST00000610354 NCR2O95944 276 aa8.39□□□□□ -1.07
CD9-212ENST00000610354 AMTP48728 403 aa8.39□□□□□ -1.07
CD9-212ENST00000610354 POLR2KP53803 58 aaKnown RBP8.39□□□□□ -1.07
CD9-212ENST00000610354 PKIAP61925 76 aa8.39□□□□□ -1.07
CD9-212ENST00000610354 Q0VG73 95 aa8.39□□□□□ -1.07
CD9-212ENST00000610354 CLPSL2Q6UWE3 100 aa8.39□□□□□ -1.07
CD9-212ENST00000610354 LINC00269Q8N2A0 174 aa8.39□□□□□ -1.07
CD9-212ENST00000610354 RMI2Q96E14 147 aa8.39□□□□□ -1.07
CD9-212ENST00000610354 KRTAP4-5Q9BYR2 181 aa8.39□□□□□ -1.07
CD9-212ENST00000610354 FAT1Q14517 4588 aa8.39□□□□□ -1.07
CD9-212ENST00000610354 ABCA13Q86UQ4 5058 aa8.38□□□□□ -1.07
CD9-212ENST00000610354 A0A1B0GUV1 79 aa8.38□□□□□ -1.07
CD9-212ENST00000610354 A0A1B0GXF2 115 aa8.38□□□□□ -1.07
CD9-212ENST00000610354 FAM104BQ5XKR9 115 aa8.38□□□□□ -1.07
CD9-212ENST00000610354 NRACQ8N912 160 aa8.38□□□□□ -1.07
CD9-212ENST00000610354 MRAP2Q96G30 205 aa8.38□□□□□ -1.07
CD9-212ENST00000610354 TMEM70Q9BUB7 260 aa8.38□□□□□ -1.07
CD9-212ENST00000610354 COX11Q9Y6N1 276 aa8.38□□□□□ -1.07
CD9-212ENST00000610354 IGLV5-52A0A0A0MRZ9 124 aa8.37□□□□□ -1.07
CD9-212ENST00000610354 TSHBP01222 138 aa8.37□□□□□ -1.07
CD9-212ENST00000610354 GCSHP23434 173 aa8.37□□□□□ -1.07
CD9-212ENST00000610354 CAMPP49913 170 aa8.37□□□□□ -1.07
CD9-212ENST00000610354 XGP55808 180 aa8.37□□□□□ -1.07
CD9-212ENST00000610354 MRPL51Q4U2R6 128 aaKnown RBP8.37□□□□□ -1.07
CD9-212ENST00000610354 PYY3Q5JQD4 70 aa8.37□□□□□ -1.07
CD9-212ENST00000610354 MRPL54Q6P161 138 aaKnown RBP8.37□□□□□ -1.07
CD9-212ENST00000610354 OR10D4PQ8NGN7 298 aa8.37□□□□□ -1.07
CD9-212ENST00000610354 NTN5Q8WTR8 489 aaPredicted RBP8.37□□□□□ -1.07
CD9-212ENST00000610354 ST20Q9HBF5 79 aa8.37□□□□□ -1.07
CD9-212ENST00000610354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.36□□□□□ -1.07
CD9-212ENST00000610354 IGKV2-29A2NJV5 120 aaPredicted RBP8.36□□□□□ -1.07
CD9-212ENST00000610354 CRPP02741 224 aa8.36□□□□□ -1.07
CD9-212ENST00000610354 PMCHP20382 165 aa8.36□□□□□ -1.07
CD9-212ENST00000610354 MIAQ16674 131 aa8.36□□□□□ -1.07
CD9-212ENST00000610354 C1orf43Q9BWL3 253 aa8.36□□□□□ -1.07
CD9-212ENST00000610354 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.35□□□□□ -1.07
CD9-212ENST00000610354 TRBV27A0A0K0K1C4 114 aa8.35□□□□□ -1.07
CD9-212ENST00000610354 LINC00587B1AMM8 73 aa8.35□□□□□ -1.07
CD9-212ENST00000610354 I3L3M4 83 aa8.35□□□□□ -1.07
CD9-212ENST00000610354 ESDP10768 282 aa8.35□□□□□ -1.07
CD9-212ENST00000610354 REG3AQ06141 175 aa8.35□□□□□ -1.07
CD9-212ENST00000610354 HIST1H2BLQ99880 126 aa8.35□□□□□ -1.07
CD9-212ENST00000610354 PCLOQ9Y6V0 5065 aa8.35□□□□□ -1.07
CD9-212ENST00000610354 A0A1B0GW15 77 aa8.34□□□□□ -1.07
CD9-212ENST00000610354 UBE2L6O14933 153 aa8.34□□□□□ -1.07
CD9-212ENST00000610354 APCSP02743 223 aa8.34□□□□□ -1.07
CD9-212ENST00000610354 PACRGQ96M98 296 aaPredicted RBP8.34□□□□□ -1.07
CD9-212ENST00000610354 CDIP1Q9H305 208 aa8.34□□□□□ -1.07
CD9-212ENST00000610354 IGLV10-54A0A075B6I4 117 aa8.33□□□□□ -1.08
CD9-212ENST00000610354 FGF6P10767 208 aa8.33□□□□□ -1.08
CD9-212ENST00000610354 FABP4P15090 132 aa8.33□□□□□ -1.08
CD9-212ENST00000610354 HBBP68871 147 aa8.33□□□□□ -1.08
CD9-212ENST00000610354 FAM30AQ9NZY2 134 aa8.33□□□□□ -1.08
CD9-212ENST00000610354 USP17L23D6RBM5 183 aa8.32□□□□□ -1.08
CD9-212ENST00000610354 H7C423 109 aa8.32□□□□□ -1.08
CD9-212ENST00000610354 HLA-DQA1P01909 254 aa8.32□□□□□ -1.08
CD9-212ENST00000610354 LINC01620Q4KN68 170 aa8.32□□□□□ -1.08
CD9-212ENST00000610354 LCE3BQ5TA77 95 aa8.32□□□□□ -1.08
CD9-212ENST00000610354 TRAPPC1Q9Y5R8 145 aa8.32□□□□□ -1.08
CD9-212ENST00000610354 VCYO14598 125 aa8.31□□□□□ -1.08
CD9-212ENST00000610354 SUMO2P61956 95 aaKnown RBP8.31□□□□□ -1.08
CD9-212ENST00000610354 HAMPP81172 84 aa8.31□□□□□ -1.08
CD9-212ENST00000610354 JOSD1Q15040 202 aaPredicted RBP8.31□□□□□ -1.08
CD9-212ENST00000610354 COX19Q49B96 90 aa8.31□□□□□ -1.08
CD9-212ENST00000610354 PDZD11Q5EBL8 140 aa8.31□□□□□ -1.08
CD9-212ENST00000610354 VPS13BQ7Z7G8 4022 aa8.31□□□□□ -1.08
CD9-212ENST00000610354 TRAV8-4A0A0B4J246 113 aa8.3□□□□□ -1.08
CD9-212ENST00000610354 D6R8Y8 96 aa8.3□□□□□ -1.08
CD9-212ENST00000610354 TNFRSF6BO95407 300 aa8.3□□□□□ -1.08
CD9-212ENST00000610354 NPYP01303 97 aa8.3□□□□□ -1.08
CD9-212ENST00000610354 PRSS1P07477 247 aa8.3□□□□□ -1.08
CD9-212ENST00000610354 CKS2P33552 79 aa8.3□□□□□ -1.08
CD9-212ENST00000610354 AMMECR1LQ6DCA0 310 aa8.3□□□□□ -1.08
CD9-212ENST00000610354 RNASEKQ6P5S7 137 aaKnown RBP8.3□□□□□ -1.08
CD9-212ENST00000610354 ATP5L2Q7Z4Y8 100 aa8.3□□□□□ -1.08
CD9-212ENST00000610354 Q8N1X5 172 aa8.3□□□□□ -1.08
CD9-212ENST00000610354 TMEM18Q96B42 140 aa8.3□□□□□ -1.08
CD9-212ENST00000610354 KRTAP4-12Q9BQ66 201 aa8.3□□□□□ -1.08
CD9-212ENST00000610354 IGKV3OR2-268A0A0C4DH90 116 aa8.29□□□□□ -1.08
CD9-212ENST00000610354 PPP1R17O96001 155 aa8.29□□□□□ -1.08
CD9-212ENST00000610354 C20orf78Q9BR46 151 aa8.29□□□□□ -1.08
CD9-212ENST00000610354 RPL32P62910 135 aaKnown RBP8.29□□□□□ -1.08
CD9-212ENST00000610354 Q6ZSA8 131 aa8.29□□□□□ -1.08
CD9-212ENST00000610354 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
CD9-212ENST00000610354 AP5S1Q9NUS5 200 aa8.29□□□□□ -1.08
CD9-212ENST00000610354 GAGE12HA6NDE8 117 aa8.28□□□□□ -1.08
CD9-212ENST00000610354 MT-ND6P03923 174 aa8.28□□□□□ -1.08
CD9-212ENST00000610354 ZNF25P17030 456 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms