RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 CCL20P78556 96 aa10.58□□□□□ -0.72
CHMP4A-211ENST00000609024 TSKUQ8WUA8 353 aa10.58□□□□□ -0.72
CHMP4A-211ENST00000609024 TEX46H3BTG2 121 aa10.57□□□□□ -0.72
CHMP4A-211ENST00000609024 UBE2D1P51668 147 aa10.57□□□□□ -0.72
CHMP4A-211ENST00000609024 PHF5AQ7RTV0 110 aaKnown RBP10.57□□□□□ -0.72
CHMP4A-211ENST00000609024 COX7A2LO14548 114 aa10.56□□□□□ -0.72
CHMP4A-211ENST00000609024 IGLV7-43P04211 117 aa10.56□□□□□ -0.72
CHMP4A-211ENST00000609024 NUP35Q8NFH5 326 aa10.56□□□□□ -0.72
CHMP4A-211ENST00000609024 MED9Q9NWA0 146 aa10.56□□□□□ -0.72
CHMP4A-211ENST00000609024 IGLV1-50A0A075B6I6 118 aa10.55□□□□□ -0.72
CHMP4A-211ENST00000609024 A0A087WZ39 114 aa10.55□□□□□ -0.72
CHMP4A-211ENST00000609024 KANTRA0A1W2PQU2 76 aa10.55□□□□□ -0.72
CHMP4A-211ENST00000609024 PDE6DO43924 150 aa10.55□□□□□ -0.72
CHMP4A-211ENST00000609024 CNFNQ9BYD5 112 aa10.55□□□□□ -0.72
CHMP4A-211ENST00000609024 TRAV1-1A0A0B4J248 108 aa10.54□□□□□ -0.72
CHMP4A-211ENST00000609024 C1orf196B1AJZ1 125 aa10.54□□□□□ -0.72
CHMP4A-211ENST00000609024 H0Y9J4 135 aa10.54□□□□□ -0.72
CHMP4A-211ENST00000609024 NUDT10Q8NFP7 164 aa10.54□□□□□ -0.72
CHMP4A-211ENST00000609024 NUDT11Q96G61 164 aa10.54□□□□□ -0.72
CHMP4A-211ENST00000609024 FAM210AQ96ND0 272 aa10.54□□□□□ -0.72
CHMP4A-211ENST00000609024 RPP21Q9H633 154 aaKnown RBP10.54□□□□□ -0.72
CHMP4A-211ENST00000609024 ST20Q9HBF5 79 aa10.54□□□□□ -0.72
CHMP4A-211ENST00000609024 CDC42SE2Q9NRR3 84 aa10.54□□□□□ -0.72
CHMP4A-211ENST00000609024 SMAGPQ0VAQ4 97 aa10.53□□□□□ -0.72
CHMP4A-211ENST00000609024 ZNF345Q14585 488 aa10.53□□□□□ -0.72
CHMP4A-211ENST00000609024 TMEM242Q9NWH2 141 aa10.53□□□□□ -0.72
CHMP4A-211ENST00000609024 G3V3Q6 166 aa10.52□□□□□ -0.73
CHMP4A-211ENST00000609024 BCL2L11O43521 198 aa10.52□□□□□ -0.73
CHMP4A-211ENST00000609024 C2orf48Q96LS8 159 aa10.52□□□□□ -0.73
CHMP4A-211ENST00000609024 MUC2Q02817 5179 aa10.52□□□□□ -0.73
CHMP4A-211ENST00000609024 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.51□□□□□ -0.73
CHMP4A-211ENST00000609024 ESDP10768 282 aa10.51□□□□□ -0.73
CHMP4A-211ENST00000609024 RPL13AP40429 203 aaKnown RBP10.51□□□□□ -0.73
CHMP4A-211ENST00000609024 MEF2BQ02080 365 aaPredicted RBP10.51□□□□□ -0.73
CHMP4A-211ENST00000609024 MRPL52Q86TS9 123 aaKnown RBP10.51□□□□□ -0.73
CHMP4A-211ENST00000609024 OPRPNQ99935 248 aaPredicted RBP10.51□□□□□ -0.73
CHMP4A-211ENST00000609024 C7orf77A4D0Y5 90 aa10.5□□□□□ -0.73
CHMP4A-211ENST00000609024 SMLR1H3BR10 107 aa10.5□□□□□ -0.73
CHMP4A-211ENST00000609024 FOXA3P55318 350 aaPredicted RBP10.5□□□□□ -0.73
CHMP4A-211ENST00000609024 BORCS7Q96B45 105 aa10.5□□□□□ -0.73
CHMP4A-211ENST00000609024 TRBV6-5A0A0K0K1A5 114 aa10.49□□□□□ -0.73
CHMP4A-211ENST00000609024 TSHBP01222 138 aa10.49□□□□□ -0.73
CHMP4A-211ENST00000609024 SPAG11BQ08648 103 aa10.49□□□□□ -0.73
CHMP4A-211ENST00000609024 IMMP2LQ96T52 175 aa10.49□□□□□ -0.73
CHMP4A-211ENST00000609024 RNASE7Q9H1E1 156 aaKnown RBP10.49□□□□□ -0.73
CHMP4A-211ENST00000609024 TRAV13-1A0A0B4J241 112 aa10.48□□□□□ -0.73
CHMP4A-211ENST00000609024 FCER1GP30273 86 aa10.48□□□□□ -0.73
CHMP4A-211ENST00000609024 TRBV20OR9-2A0A075B6H5 130 aa10.47□□□□□ -0.73
CHMP4A-211ENST00000609024 RNF151Q2KHN1 245 aa10.47□□□□□ -0.73
CHMP4A-211ENST00000609024 C5orf38Q86SI9 138 aa10.47□□□□□ -0.73
CHMP4A-211ENST00000609024 UBE2BP63146 152 aa10.46□□□□□ -0.73
CHMP4A-211ENST00000609024 FAM19A5Q7Z5A7 132 aaPredicted RBP10.45□□□□□ -0.74
CHMP4A-211ENST00000609024 HMSDA8MTL9 139 aa10.44□□□□□ -0.74
CHMP4A-211ENST00000609024 NDUFA1O15239 70 aa10.44□□□□□ -0.74
CHMP4A-211ENST00000609024 GATCO43716 136 aaKnown RBP10.44□□□□□ -0.74
CHMP4A-211ENST00000609024 RNASE13Q5GAN3 156 aaKnown RBP10.44□□□□□ -0.74
CHMP4A-211ENST00000609024 OR10D4PQ8NGN7 298 aa10.44□□□□□ -0.74
CHMP4A-211ENST00000609024 TRBV27A0A0K0K1C4 114 aa10.43□□□□□ -0.74
CHMP4A-211ENST00000609024 A8MWL6 223 aa10.43□□□□□ -0.74
CHMP4A-211ENST00000609024 MRPL35Q9NZE8 188 aaKnown RBP10.43□□□□□ -0.74
CHMP4A-211ENST00000609024 KRTAP9-6A0A140TA67 174 aa10.42□□□□□ -0.74
CHMP4A-211ENST00000609024 FAM168BA1KXE4 195 aa10.42□□□□□ -0.74
CHMP4A-211ENST00000609024 F8WDY8 70 aa10.42□□□□□ -0.74
CHMP4A-211ENST00000609024 VCYO14598 125 aa10.42□□□□□ -0.74
CHMP4A-211ENST00000609024 OCC1Q8TAD7 63 aa10.42□□□□□ -0.74
CHMP4A-211ENST00000609024 ORAOV1Q8WV07 137 aa10.42□□□□□ -0.74
CHMP4A-211ENST00000609024 TMEM18Q96B42 140 aa10.42□□□□□ -0.74
CHMP4A-211ENST00000609024 KIR2DL4Q99706 377 aa10.42□□□□□ -0.74
CHMP4A-211ENST00000609024 CSDC2Q9Y534 153 aaKnown RBP10.42□□□□□ -0.74
CHMP4A-211ENST00000609024 K7EN84 100 aa10.41□□□□□ -0.74
CHMP4A-211ENST00000609024 TAGLN2P37802 199 aaKnown RBP10.41□□□□□ -0.74
CHMP4A-211ENST00000609024 POLR2KP53803 58 aaKnown RBP10.41□□□□□ -0.74
CHMP4A-211ENST00000609024 TMEM241Q24JQ0 296 aa10.41□□□□□ -0.74
CHMP4A-211ENST00000609024 GAGE2EQ4V326 116 aa10.41□□□□□ -0.74
CHMP4A-211ENST00000609024 GAGE2DQ9UEU5 116 aa10.41□□□□□ -0.74
CHMP4A-211ENST00000609024 TSPAN13O95857 204 aa10.4□□□□□ -0.74
CHMP4A-211ENST00000609024 KRTAP1-4P0C5Y4 121 aa10.4□□□□□ -0.74
CHMP4A-211ENST00000609024 CARHSP1Q9Y2V2 147 aaKnown RBP10.4□□□□□ -0.74
CHMP4A-211ENST00000609024 UBE2D4Q9Y2X8 147 aa10.4□□□□□ -0.74
CHMP4A-211ENST00000609024 M0QXV9 152 aa10.39□□□□□ -0.75
CHMP4A-211ENST00000609024 PPP1R17O96001 155 aa10.39□□□□□ -0.75
CHMP4A-211ENST00000609024 KRTAP11-1Q8IUC1 163 aa10.38□□□□□ -0.75
CHMP4A-211ENST00000609024 TMEM191AQ9H0A3 160 aa10.38□□□□□ -0.75
CHMP4A-211ENST00000609024 A0A1B0GUT8 65 aa10.37□□□□□ -0.75
CHMP4A-211ENST00000609024 RGS21Q2M5E4 152 aa10.37□□□□□ -0.75
CHMP4A-211ENST00000609024 Q6ZUT4 128 aa10.37□□□□□ -0.75
CHMP4A-211ENST00000609024 TLX1NBP0CAT3 122 aa10.36□□□□□ -0.75
CHMP4A-211ENST00000609024 RAB4AP20338 218 aa10.36□□□□□ -0.75
CHMP4A-211ENST00000609024 FAT4Q6V0I7 4981 aa10.35□□□□□ -0.75
CHMP4A-211ENST00000609024 SUMO2P61956 95 aaKnown RBP10.35□□□□□ -0.75
CHMP4A-211ENST00000609024 UNQ6190/PRO20217Q6UXQ8 127 aa10.35□□□□□ -0.75
CHMP4A-211ENST00000609024 FAM231DQ6ZW35 169 aa10.35□□□□□ -0.75
CHMP4A-211ENST00000609024 AMN1Q8IY45 258 aa10.35□□□□□ -0.75
CHMP4A-211ENST00000609024 PPP1R2P9O14990 202 aa10.34□□□□□ -0.75
CHMP4A-211ENST00000609024 CT83Q5H943 113 aa10.34□□□□□ -0.75
CHMP4A-211ENST00000609024 TIMM21Q9BVV7 248 aa10.34□□□□□ -0.75
CHMP4A-211ENST00000609024 SMDT1Q9H4I9 107 aa10.34□□□□□ -0.75
CHMP4A-211ENST00000609024 C6orf48Q9UBA6 75 aa10.34□□□□□ -0.75
CHMP4A-211ENST00000609024 HIGD1CA8MV81 97 aa10.33□□□□□ -0.76
CHMP4A-211ENST00000609024 SMKR1H3BMG3 65 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms