RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 CFAP46Q8IYW2 2715 aa9.2□□□□□ -0.94
CTCFL-218ENST00000608440 IGSF10Q6WRI0 2623 aa9.19□□□□□ -0.94
CTCFL-218ENST00000608440 SMIM26A0A096LP01 95 aa9.19□□□□□ -0.94
CTCFL-218ENST00000608440 F6UB75 175 aa9.19□□□□□ -0.94
CTCFL-218ENST00000608440 H7BZZ5 65 aa9.19□□□□□ -0.94
CTCFL-218ENST00000608440 LYPD5Q6UWN5 251 aa9.19□□□□□ -0.94
CTCFL-218ENST00000608440 FAM19A1Q7Z5A9 133 aa9.19□□□□□ -0.94
CTCFL-218ENST00000608440 HIVEP3Q5T1R4 2406 aa9.19□□□□□ -0.94
CTCFL-218ENST00000608440 SPTBN1Q01082 2364 aaKnown RBP9.19□□□□□ -0.94
CTCFL-218ENST00000608440 NCR3O14931 201 aa9.18□□□□□ -0.94
CTCFL-218ENST00000608440 LINC01560Q8TB33 94 aa9.18□□□□□ -0.94
CTCFL-218ENST00000608440 SNURFQ9Y675 71 aa9.18□□□□□ -0.94
CTCFL-218ENST00000608440 IGKV3-7A0A075B6H7 116 aa9.18□□□□□ -0.94
CTCFL-218ENST00000608440 C15orf32Q32M92 178 aa9.18□□□□□ -0.94
CTCFL-218ENST00000608440 LY6G5BQ8NDX9 201 aa9.18□□□□□ -0.94
CTCFL-218ENST00000608440 SPTAN1Q13813 2472 aaKnown RBP9.17□□□□□ -0.94
CTCFL-218ENST00000608440 MRPS36P82909 103 aaKnown RBP9.17□□□□□ -0.94
CTCFL-218ENST00000608440 CLEC19AQ6UXS0 136 aa9.17□□□□□ -0.94
CTCFL-218ENST00000608440 SOSTDC1Q6X4U4 206 aa9.17□□□□□ -0.94
CTCFL-218ENST00000608440 RBM3P98179 157 aaKnown RBP9.16□□□□□ -0.94
CTCFL-218ENST00000608440 ENHOQ6UWT2 76 aa9.16□□□□□ -0.94
CTCFL-218ENST00000608440 EPG5Q9HCE0 2579 aa9.16□□□□□ -0.94
CTCFL-218ENST00000608440 ASH1LQ9NR48 2969 aaKnown RBP9.15□□□□□ -0.94
CTCFL-218ENST00000608440 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.15□□□□□ -0.94
CTCFL-218ENST00000608440 MPLKIPQ8TAP9 179 aa9.15□□□□□ -0.94
CTCFL-218ENST00000608440 A0A087WYN8 130 aa9.15□□□□□ -0.95
CTCFL-218ENST00000608440 GNLYP22749 145 aa9.15□□□□□ -0.95
CTCFL-218ENST00000608440 Q9H8V8 135 aa9.15□□□□□ -0.95
CTCFL-218ENST00000608440 KLK9Q9UKQ9 250 aa9.15□□□□□ -0.95
CTCFL-218ENST00000608440 M0QY20 66 aa9.14□□□□□ -0.95
CTCFL-218ENST00000608440 FBXL19-AS1Q494R0 122 aa9.14□□□□□ -0.95
CTCFL-218ENST00000608440 FAM104AQ969W3 186 aa9.14□□□□□ -0.95
CTCFL-218ENST00000608440 RMI2Q96E14 147 aa9.14□□□□□ -0.95
CTCFL-218ENST00000608440 MRPL53Q96EL3 112 aaKnown RBP9.14□□□□□ -0.95
CTCFL-218ENST00000608440 RNF5Q99942 180 aa9.14□□□□□ -0.95
CTCFL-218ENST00000608440 TRBV6-5A0A0K0K1A5 114 aa9.14□□□□□ -0.95
CTCFL-218ENST00000608440 A0A1W2PRX2 142 aa9.14□□□□□ -0.95
CTCFL-218ENST00000608440 MED14OSP0DP75 135 aa9.14□□□□□ -0.95
CTCFL-218ENST00000608440 PIK3CD-AS1Q5SR53 167 aa9.13□□□□□ -0.95
CTCFL-218ENST00000608440 MED13LQ71F56 2210 aa9.13□□□□□ -0.95
CTCFL-218ENST00000608440 TRBV7-6A0A0J9YX20 115 aa9.13□□□□□ -0.95
CTCFL-218ENST00000608440 TIMM17BO60830 172 aa9.13□□□□□ -0.95
CTCFL-218ENST00000608440 ECSCRQ19T08 205 aa9.13□□□□□ -0.95
CTCFL-218ENST00000608440 BPESC1Q9GZL8 116 aa9.13□□□□□ -0.95
CTCFL-218ENST00000608440 SIRPDQ9H106 197 aa9.13□□□□□ -0.95
CTCFL-218ENST00000608440 CDKN2A-AS1Q9UH64 79 aa9.13□□□□□ -0.95
CTCFL-218ENST00000608440 LENEPQ9Y5L5 61 aa9.13□□□□□ -0.95
CTCFL-218ENST00000608440 E7EQL1 145 aa9.12□□□□□ -0.95
CTCFL-218ENST00000608440 F8WEM9 126 aa9.12□□□□□ -0.95
CTCFL-218ENST00000608440 DCHS2Q6V1P9 2916 aa9.12□□□□□ -0.95
CTCFL-218ENST00000608440 SOCS3O14543 225 aa9.12□□□□□ -0.95
CTCFL-218ENST00000608440 SLPIP03973 132 aa9.12□□□□□ -0.95
CTCFL-218ENST00000608440 CCKP06307 115 aa9.11□□□□□ -0.95
CTCFL-218ENST00000608440 IGHV3-73A0A0B4J1V6 119 aa9.11□□□□□ -0.95
CTCFL-218ENST00000608440 NDUFA1O15239 70 aa9.11□□□□□ -0.95
CTCFL-218ENST00000608440 ITLN2Q8WWU7 325 aaPredicted RBP9.11□□□□□ -0.95
CTCFL-218ENST00000608440 LYNX1G3V0Z9 82 aa9.1□□□□□ -0.95
CTCFL-218ENST00000608440 LYNX1P0DP58 116 aa9.1□□□□□ -0.95
CTCFL-218ENST00000608440 HIST2H2BCQ6DN03 193 aa9.1□□□□□ -0.95
CTCFL-218ENST00000608440 HIST2H2BDQ6DRA6 164 aa9.1□□□□□ -0.95
CTCFL-218ENST00000608440 AKAP6Q13023 2319 aa9.1□□□□□ -0.95
CTCFL-218ENST00000608440 NPBQ8NG41 125 aa9.1□□□□□ -0.95
CTCFL-218ENST00000608440 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.09□□□□□ -0.95
CTCFL-218ENST00000608440 IGKV2-29A2NJV5 120 aaPredicted RBP9.09□□□□□ -0.95
CTCFL-218ENST00000608440 PRB1P04280 392 aa9.09□□□□□ -0.95
CTCFL-218ENST00000608440 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.09□□□□□ -0.95
CTCFL-218ENST00000608440 CCDC140Q96MF4 163 aa9.09□□□□□ -0.95
CTCFL-218ENST00000608440 LECT2O14960 151 aa9.08□□□□□ -0.96
CTCFL-218ENST00000608440 DPM3Q9P2X0 92 aa9.08□□□□□ -0.96
CTCFL-218ENST00000608440 MYO18BQ8IUG5 2567 aa9.08□□□□□ -0.96
CTCFL-218ENST00000608440 ZNF462Q96JM2 2506 aa9.07□□□□□ -0.96
CTCFL-218ENST00000608440 S100A7L2Q5SY68 101 aa9.07□□□□□ -0.96
CTCFL-218ENST00000608440 MIR7-3HGQ8N6C7 128 aa9.07□□□□□ -0.96
CTCFL-218ENST00000608440 MAP1AP78559 2803 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-218ENST00000608440 HRNRQ86YZ3 2850 aaPredicted RBP9.07□□□□□ -0.96
CTCFL-218ENST00000608440 FLNCQ14315 2725 aa9.07□□□□□ -0.96
CTCFL-218ENST00000608440 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
CTCFL-218ENST00000608440 RETNQ9HD89 108 aa9.07□□□□□ -0.96
CTCFL-218ENST00000608440 KAAG1Q9UBP8 84 aa9.06□□□□□ -0.96
CTCFL-218ENST00000608440 ZFHX3Q15911 3703 aa9.06□□□□□ -0.96
CTCFL-218ENST00000608440 IGHV7-81A0A0B4J1V7 117 aa9.06□□□□□ -0.96
CTCFL-218ENST00000608440 BBC3Q96PG8 261 aaPredicted RBP9.06□□□□□ -0.96
CTCFL-218ENST00000608440 COX6A2Q02221 97 aa9.05□□□□□ -0.96
CTCFL-218ENST00000608440 OBSCN-AS1Q96MR7 158 aa9.05□□□□□ -0.96
CTCFL-218ENST00000608440 USP9XQ93008 2570 aaPredicted RBP9.05□□□□□ -0.96
CTCFL-218ENST00000608440 G3V318 75 aa9.05□□□□□ -0.96
CTCFL-218ENST00000608440 C19orf84I3L1E1 186 aa9.05□□□□□ -0.96
CTCFL-218ENST00000608440 CRPP02741 224 aa9.05□□□□□ -0.96
CTCFL-218ENST00000608440 PROK1P58294 105 aa9.05□□□□□ -0.96
CTCFL-218ENST00000608440 SNRPD3P62318 126 aaKnown RBP9.05□□□□□ -0.96
CTCFL-218ENST00000608440 FAM110DQ8TAY7 271 aaPredicted RBP9.05□□□□□ -0.96
CTCFL-218ENST00000608440 IGKV3-20P01619 116 aa9.04□□□□□ -0.96
CTCFL-218ENST00000608440 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
CTCFL-218ENST00000608440 LINC00337Q8N6G1 96 aa9.04□□□□□ -0.96
CTCFL-218ENST00000608440 Q9UF83 564 aa9.04□□□□□ -0.96
CTCFL-218ENST00000608440 TRAV7A0A075B6U4 112 aa9.04□□□□□ -0.96
CTCFL-218ENST00000608440 SMIM11BQ8TCY0 68 aa9.04□□□□□ -0.96
CTCFL-218ENST00000608440 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
CTCFL-218ENST00000608440 UNQ9165/PRO28630Q6UXU0 137 aa9.03□□□□□ -0.96
CTCFL-218ENST00000608440 TRAV10A0A0B4J240 114 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms