RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 APCSP02743 223 aa6.52□□□□□ -1.37
CTSA-215ENST00000607187 PMCHP20382 165 aa6.52□□□□□ -1.37
CTSA-215ENST00000607187 POLR2KP53803 58 aaKnown RBP6.52□□□□□ -1.37
CTSA-215ENST00000607187 C14orf177Q52M58 125 aa6.52□□□□□ -1.37
CTSA-215ENST00000607187 SRRM2Q9UQ35 2752 aaKnown RBP6.51□□□□□ -1.37
CTSA-215ENST00000607187 TRBV27A0A0K0K1C4 114 aa6.51□□□□□ -1.37
CTSA-215ENST00000607187 A0A1B0GW15 77 aa6.51□□□□□ -1.37
CTSA-215ENST00000607187 TSHBP01222 138 aa6.51□□□□□ -1.37
CTSA-215ENST00000607187 SNRPEP62304 92 aaKnown RBP6.51□□□□□ -1.37
CTSA-215ENST00000607187 CLLU1Q5K131 121 aa6.51□□□□□ -1.37
CTSA-215ENST00000607187 FAM104BQ5XKR9 115 aa6.51□□□□□ -1.37
CTSA-215ENST00000607187 NRACQ8N912 160 aa6.51□□□□□ -1.37
CTSA-215ENST00000607187 DNAH8Q96JB1 4490 aa6.51□□□□□ -1.37
CTSA-215ENST00000607187 FAT1Q14517 4588 aa6.5□□□□□ -1.37
CTSA-215ENST00000607187 IGLV10-54A0A075B6I4 117 aa6.5□□□□□ -1.37
CTSA-215ENST00000607187 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.5□□□□□ -1.37
CTSA-215ENST00000607187 IGKV2-29A2NJV5 120 aaPredicted RBP6.5□□□□□ -1.37
CTSA-215ENST00000607187 SMKR1H3BMG3 65 aa6.5□□□□□ -1.37
CTSA-215ENST00000607187 PPP1R17O96001 155 aa6.5□□□□□ -1.37
CTSA-215ENST00000607187 ESDP10768 282 aa6.5□□□□□ -1.37
CTSA-215ENST00000607187 MRPL51Q4U2R6 128 aaKnown RBP6.5□□□□□ -1.37
CTSA-215ENST00000607187 AMMECR1LQ6DCA0 310 aa6.5□□□□□ -1.37
CTSA-215ENST00000607187 Q6ZSA8 131 aa6.5□□□□□ -1.37
CTSA-215ENST00000607187 ABCA13Q86UQ4 5058 aa6.49□□□□□ -1.37
CTSA-215ENST00000607187 A0A1B0GXF2 115 aa6.49□□□□□ -1.37
CTSA-215ENST00000607187 LINC00862A6NCI5 91 aa6.49□□□□□ -1.37
CTSA-215ENST00000607187 PPP1R2P9O14990 202 aa6.49□□□□□ -1.37
CTSA-215ENST00000607187 PRSS1P07477 247 aa6.49□□□□□ -1.37
CTSA-215ENST00000607187 FGF6P10767 208 aa6.49□□□□□ -1.37
CTSA-215ENST00000607187 ZNF25P17030 456 aaPredicted RBP6.49□□□□□ -1.37
CTSA-215ENST00000607187 HBBP68871 147 aa6.49□□□□□ -1.37
CTSA-215ENST00000607187 HAMPP81172 84 aa6.49□□□□□ -1.37
CTSA-215ENST00000607187 IFITM2Q01629 132 aa6.49□□□□□ -1.37
CTSA-215ENST00000607187 PNRC1Q12796 327 aaPredicted RBP6.49□□□□□ -1.37
CTSA-215ENST00000607187 UBE2V1Q13404 147 aa6.49□□□□□ -1.37
CTSA-215ENST00000607187 LINC01620Q4KN68 170 aa6.49□□□□□ -1.37
CTSA-215ENST00000607187 RNASEKQ6P5S7 137 aaKnown RBP6.49□□□□□ -1.37
CTSA-215ENST00000607187 TMEM242Q9NWH2 141 aa6.49□□□□□ -1.37
CTSA-215ENST00000607187 TRBV24-1A0A075B6N3 115 aa6.48□□□□□ -1.37
CTSA-215ENST00000607187 EPM2AB3EWF7 344 aa6.48□□□□□ -1.37
CTSA-215ENST00000607187 F8W036 122 aa6.48□□□□□ -1.37
CTSA-215ENST00000607187 S100A8P05109 93 aa6.48□□□□□ -1.37
CTSA-215ENST00000607187 LBHQ53QV2 105 aaPredicted RBP6.48□□□□□ -1.37
CTSA-215ENST00000607187 MRPL54Q6P161 138 aaKnown RBP6.48□□□□□ -1.37
CTSA-215ENST00000607187 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
CTSA-215ENST00000607187 VPS13BQ7Z7G8 4022 aa6.48□□□□□ -1.37
CTSA-215ENST00000607187 C7orf77A4D0Y5 90 aa6.47□□□□□ -1.37
CTSA-215ENST00000607187 SMR3BP02814 79 aaPredicted RBP6.47□□□□□ -1.37
CTSA-215ENST00000607187 CKS2P33552 79 aa6.47□□□□□ -1.37
CTSA-215ENST00000607187 Q5VSD8 79 aa6.47□□□□□ -1.37
CTSA-215ENST00000607187 ATP5L2Q7Z4Y8 100 aa6.47□□□□□ -1.37
CTSA-215ENST00000607187 MRPL52Q86TS9 123 aaKnown RBP6.47□□□□□ -1.37
CTSA-215ENST00000607187 BTF3L4Q96K17 158 aa6.47□□□□□ -1.37
CTSA-215ENST00000607187 C20orf78Q9BR46 151 aa6.47□□□□□ -1.37
CTSA-215ENST00000607187 IGKV3OR2-268A0A0C4DH90 116 aa6.46□□□□□ -1.38
CTSA-215ENST00000607187 MT-ND4LP03901 98 aa6.46□□□□□ -1.38
CTSA-215ENST00000607187 FCER1GP30273 86 aa6.46□□□□□ -1.38
CTSA-215ENST00000607187 RPL32P62910 135 aaKnown RBP6.46□□□□□ -1.38
CTSA-215ENST00000607187 UQCC3Q6UW78 93 aa6.46□□□□□ -1.38
CTSA-215ENST00000607187 OR5A1Q8NGJ0 315 aa6.46□□□□□ -1.38
CTSA-215ENST00000607187 TMEM101Q96IK0 257 aa6.46□□□□□ -1.38
CTSA-215ENST00000607187 KIR2DL4Q99706 377 aa6.46□□□□□ -1.38
CTSA-215ENST00000607187 D6R8Y8 96 aa6.45□□□□□ -1.38
CTSA-215ENST00000607187 PPBPP02775 128 aa6.45□□□□□ -1.38
CTSA-215ENST00000607187 CHCHD10Q8WYQ3 142 aaPredicted RBP6.45□□□□□ -1.38
CTSA-215ENST00000607187 CDC42SE2Q9NRR3 84 aa6.45□□□□□ -1.38
CTSA-215ENST00000607187 CSDC2Q9Y534 153 aaKnown RBP6.45□□□□□ -1.38
CTSA-215ENST00000607187 FLG2Q5D862 2391 aaPredicted RBP6.44□□□□□ -1.38
CTSA-215ENST00000607187 LINC00959A0A1B0GUT2 108 aa6.44□□□□□ -1.38
CTSA-215ENST00000607187 hDV102S1A0JD36 115 aa6.44□□□□□ -1.38
CTSA-215ENST00000607187 TMEM218A2RU14 115 aa6.44□□□□□ -1.38
CTSA-215ENST00000607187 PHOX2AO14813 284 aa6.44□□□□□ -1.38
CTSA-215ENST00000607187 NPYP01303 97 aa6.44□□□□□ -1.38
CTSA-215ENST00000607187 ADCYAP1P18509 176 aa6.44□□□□□ -1.38
CTSA-215ENST00000607187 CNBPP62633 177 aaKnown RBP6.44□□□□□ -1.38
CTSA-215ENST00000607187 SCXQ7RTU7 201 aa6.44□□□□□ -1.38
CTSA-215ENST00000607187 ZNF664Q8N3J9 261 aa6.44□□□□□ -1.38
CTSA-215ENST00000607187 C9orf163Q8N9P6 203 aa6.44□□□□□ -1.38
CTSA-215ENST00000607187 CHAC1Q9BUX1 264 aa6.44□□□□□ -1.38
CTSA-215ENST00000607187 TCAPO15273 167 aa6.43□□□□□ -1.38
CTSA-215ENST00000607187 SLPIP03973 132 aa6.43□□□□□ -1.38
CTSA-215ENST00000607187 GAGE2BQ13066 116 aa6.43□□□□□ -1.38
CTSA-215ENST00000607187 GAGE2EQ4V326 116 aa6.43□□□□□ -1.38
CTSA-215ENST00000607187 GAGE2AQ6NT46 116 aa6.43□□□□□ -1.38
CTSA-215ENST00000607187 ORMDL3Q8N138 153 aa6.43□□□□□ -1.38
CTSA-215ENST00000607187 C15orf56Q8N910 161 aa6.43□□□□□ -1.38
CTSA-215ENST00000607187 SMIM2Q9BVW6 85 aa6.43□□□□□ -1.38
CTSA-215ENST00000607187 GAGE2DQ9UEU5 116 aa6.43□□□□□ -1.38
CTSA-215ENST00000607187 UBE2D4Q9Y2X8 147 aa6.43□□□□□ -1.38
CTSA-215ENST00000607187 XCL1P47992 114 aa6.42□□□□□ -1.38
CTSA-215ENST00000607187 SMAGPQ0VAQ4 97 aa6.42□□□□□ -1.38
CTSA-215ENST00000607187 SDIM1Q6ZPB5 146 aa6.42□□□□□ -1.38
CTSA-215ENST00000607187 TMEM136Q6ZRR5 245 aa6.42□□□□□ -1.38
CTSA-215ENST00000607187 CIRBP-AS1Q8TBR5 109 aa6.42□□□□□ -1.38
CTSA-215ENST00000607187 IMMP2LQ96T52 175 aa6.42□□□□□ -1.38
CTSA-215ENST00000607187 TIMM21Q9BVV7 248 aa6.42□□□□□ -1.38
CTSA-215ENST00000607187 CCL25O15444 150 aa6.41□□□□□ -1.38
CTSA-215ENST00000607187 SS18Q15532 418 aa6.41□□□□□ -1.38
CTSA-215ENST00000607187 CD164L2Q6UWJ8 174 aa6.41□□□□□ -1.38
CTSA-215ENST00000607187 PRELID3AQ96N28 172 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms