RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TNFRSF6BO95407 300 aa9.38□□□□□ -0.91
TUBE1-208ENST00000604743 ZNF25P17030 456 aaPredicted RBP9.38□□□□□ -0.91
TUBE1-208ENST00000604743 hDV102S1A0JD36 115 aa9.37□□□□□ -0.91
TUBE1-208ENST00000604743 Q5VSD8 79 aa9.37□□□□□ -0.91
TUBE1-208ENST00000604743 DGAT2L7PQ6IED9 249 aa9.37□□□□□ -0.91
TUBE1-208ENST00000604743 ATP5L2Q7Z4Y8 100 aa9.37□□□□□ -0.91
TUBE1-208ENST00000604743 CHCHD10Q8WYQ3 142 aaPredicted RBP9.37□□□□□ -0.91
TUBE1-208ENST00000604743 NPYP01303 97 aa9.36□□□□□ -0.91
TUBE1-208ENST00000604743 ADCYAP1P18509 176 aa9.36□□□□□ -0.91
TUBE1-208ENST00000604743 CLRN3Q8NCR9 226 aa9.36□□□□□ -0.91
TUBE1-208ENST00000604743 C20orf78Q9BR46 151 aa9.36□□□□□ -0.91
TUBE1-208ENST00000604743 TRBV24-1A0A075B6N3 115 aa9.35□□□□□ -0.91
TUBE1-208ENST00000604743 Q6ZSA8 131 aa9.35□□□□□ -0.91
TUBE1-208ENST00000604743 CDC42SE2Q9NRR3 84 aa9.35□□□□□ -0.91
TUBE1-208ENST00000604743 CARHSP1Q9Y2V2 147 aaKnown RBP9.35□□□□□ -0.91
TUBE1-208ENST00000604743 VPS13BQ7Z7G8 4022 aa9.34□□□□□ -0.91
TUBE1-208ENST00000604743 LINC00959A0A1B0GUT2 108 aa9.34□□□□□ -0.91
TUBE1-208ENST00000604743 FAM229AH3BQW9 127 aa9.34□□□□□ -0.91
TUBE1-208ENST00000604743 PPBPP02775 128 aa9.34□□□□□ -0.91
TUBE1-208ENST00000604743 XCL1P47992 114 aa9.34□□□□□ -0.91
TUBE1-208ENST00000604743 TMEM136Q6ZRR5 245 aa9.34□□□□□ -0.91
TUBE1-208ENST00000604743 MRPL52Q86TS9 123 aaKnown RBP9.34□□□□□ -0.91
TUBE1-208ENST00000604743 ORMDL3Q8N138 153 aa9.34□□□□□ -0.91
TUBE1-208ENST00000604743 SVBPQ8N300 66 aa9.34□□□□□ -0.91
TUBE1-208ENST00000604743 ZNF664Q8N3J9 261 aa9.34□□□□□ -0.91
TUBE1-208ENST00000604743 PRELID3AQ96N28 172 aa9.34□□□□□ -0.91
TUBE1-208ENST00000604743 SMIM2Q9BVW6 85 aa9.34□□□□□ -0.91
TUBE1-208ENST00000604743 AP5S1Q9NUS5 200 aa9.34□□□□□ -0.91
TUBE1-208ENST00000604743 TCAPO15273 167 aa9.33□□□□□ -0.92
TUBE1-208ENST00000604743 CCL25O15444 150 aa9.33□□□□□ -0.92
TUBE1-208ENST00000604743 SNAPINO95295 136 aa9.33□□□□□ -0.92
TUBE1-208ENST00000604743 SS18Q15532 418 aa9.33□□□□□ -0.92
TUBE1-208ENST00000604743 HIGD2BQ4VC39 106 aa9.33□□□□□ -0.92
TUBE1-208ENST00000604743 RNASE13Q5GAN3 156 aaKnown RBP9.33□□□□□ -0.92
TUBE1-208ENST00000604743 C10orf91Q5T1B1 145 aa9.33□□□□□ -0.92
TUBE1-208ENST00000604743 CFAP161Q6P656 301 aa9.33□□□□□ -0.92
TUBE1-208ENST00000604743 SCXQ7RTU7 201 aa9.33□□□□□ -0.92
TUBE1-208ENST00000604743 TMEM18Q96B42 140 aa9.33□□□□□ -0.92
TUBE1-208ENST00000604743 UBE2D4Q9Y2X8 147 aa9.33□□□□□ -0.92
TUBE1-208ENST00000604743 RPL32P62910 135 aaKnown RBP9.32□□□□□ -0.92
TUBE1-208ENST00000604743 SMAGPQ0VAQ4 97 aa9.32□□□□□ -0.92
TUBE1-208ENST00000604743 RHEBQ15382 184 aa9.32□□□□□ -0.92
TUBE1-208ENST00000604743 SLC7A5P1Q8MH63 180 aa9.32□□□□□ -0.92
TUBE1-208ENST00000604743 C15orf56Q8N910 161 aa9.32□□□□□ -0.92
TUBE1-208ENST00000604743 C9orf163Q8N9P6 203 aa9.32□□□□□ -0.92
TUBE1-208ENST00000604743 CTDSP1Q9GZU7 261 aa9.32□□□□□ -0.92
TUBE1-208ENST00000604743 LOC389332A0A1B0GUA5 103 aa9.31□□□□□ -0.92
TUBE1-208ENST00000604743 PHOX2AO14813 284 aa9.31□□□□□ -0.92
TUBE1-208ENST00000604743 APOC3P02656 99 aa9.31□□□□□ -0.92
TUBE1-208ENST00000604743 RPL39P62891 51 aaKnown RBP9.31□□□□□ -0.92
TUBE1-208ENST00000604743 FOXI1Q12951 378 aa9.31□□□□□ -0.92
TUBE1-208ENST00000604743 CHAC1Q9BUX1 264 aa9.31□□□□□ -0.92
TUBE1-208ENST00000604743 SLPIP03973 132 aa9.3□□□□□ -0.92
TUBE1-208ENST00000604743 Q6ZUT4 128 aa9.3□□□□□ -0.92
TUBE1-208ENST00000604743 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.29□□□□□ -0.92
TUBE1-208ENST00000604743 TRAV13-1A0A0B4J241 112 aa9.29□□□□□ -0.92
TUBE1-208ENST00000604743 INAFM2P0DMQ5 153 aa9.29□□□□□ -0.92
TUBE1-208ENST00000604743 RAB5AP20339 215 aa9.29□□□□□ -0.92
TUBE1-208ENST00000604743 CNBPP62633 177 aaKnown RBP9.29□□□□□ -0.92
TUBE1-208ENST00000604743 LINC00528Q8N1L1 170 aa9.29□□□□□ -0.92
TUBE1-208ENST00000604743 CIRBP-AS1Q8TBR5 109 aa9.29□□□□□ -0.92
TUBE1-208ENST00000604743 CSDC2Q9Y534 153 aaKnown RBP9.29□□□□□ -0.92
TUBE1-208ENST00000604743 S100PP25815 95 aa9.28□□□□□ -0.92
TUBE1-208ENST00000604743 IMMP2LQ96T52 175 aa9.28□□□□□ -0.92
TUBE1-208ENST00000604743 MAP1LC3AQ9H492 121 aa9.28□□□□□ -0.92
TUBE1-208ENST00000604743 SRRM2Q9UQ35 2752 aaKnown RBP9.28□□□□□ -0.92
TUBE1-208ENST00000604743 IGHV3-64A0A075B6Q5 118 aa9.27□□□□□ -0.93
TUBE1-208ENST00000604743 C1orf196B1AJZ1 125 aa9.27□□□□□ -0.93
TUBE1-208ENST00000604743 CD164L2Q6UWJ8 174 aa9.27□□□□□ -0.93
TUBE1-208ENST00000604743 SDIM1Q6ZPB5 146 aa9.27□□□□□ -0.93
TUBE1-208ENST00000604743 LINC00526Q96FQ7 95 aa9.27□□□□□ -0.93
TUBE1-208ENST00000604743 OPRPNQ99935 248 aaPredicted RBP9.27□□□□□ -0.93
TUBE1-208ENST00000604743 TIMM21Q9BVV7 248 aa9.27□□□□□ -0.93
TUBE1-208ENST00000604743 RPS10P5Q9NQ39 176 aa9.27□□□□□ -0.93
TUBE1-208ENST00000604743 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.27□□□□□ -0.93
TUBE1-208ENST00000604743 DPH3Q96FX2 82 aa9.26□□□□□ -0.93
TUBE1-208ENST00000604743 LAMTOR2Q9Y2Q5 125 aa9.26□□□□□ -0.93
TUBE1-208ENST00000604743 TRAV9-1A0A075B6T8 112 aa9.25□□□□□ -0.93
TUBE1-208ENST00000604743 GVQW2A0A096LPI5 108 aaPredicted RBP9.25□□□□□ -0.93
TUBE1-208ENST00000604743 IGHV1-58A0A0C4DH39 117 aa9.25□□□□□ -0.93
TUBE1-208ENST00000604743 PANO1I0J062 215 aa9.25□□□□□ -0.93
TUBE1-208ENST00000604743 MALP21145 153 aa9.25□□□□□ -0.93
TUBE1-208ENST00000604743 KIAA1644Q3SXP7 199 aa9.25□□□□□ -0.93
TUBE1-208ENST00000604743 SPANXA1Q9NS26 97 aa9.25□□□□□ -0.93
TUBE1-208ENST00000604743 PRSS47A8MTI9 375 aa9.24□□□□□ -0.93
TUBE1-208ENST00000604743 PLA2G1BP04054 148 aaKnown RBP9.24□□□□□ -0.93
TUBE1-208ENST00000604743 C5orf38Q86SI9 138 aa9.24□□□□□ -0.93
TUBE1-208ENST00000604743 Q8N8P6 123 aa9.24□□□□□ -0.93
TUBE1-208ENST00000604743 ZNF561-AS1K7EIQ3 104 aa9.23□□□□□ -0.93
TUBE1-208ENST00000604743 COX7A2LO14548 114 aa9.23□□□□□ -0.93
TUBE1-208ENST00000604743 CHTF8P0CG12 524 aa9.23□□□□□ -0.93
TUBE1-208ENST00000604743 IFI27P40305 119 aaPredicted RBP9.23□□□□□ -0.93
TUBE1-208ENST00000604743 COX6A2Q02221 97 aa9.23□□□□□ -0.93
TUBE1-208ENST00000604743 FAM104AQ969W3 186 aa9.23□□□□□ -0.93
TUBE1-208ENST00000604743 FLG2Q5D862 2391 aaPredicted RBP9.23□□□□□ -0.93
TUBE1-208ENST00000604743 IFITM10A6NMD0 228 aa9.22□□□□□ -0.93
TUBE1-208ENST00000604743 MRPS36P82909 103 aaKnown RBP9.21□□□□□ -0.94
TUBE1-208ENST00000604743 PRSS3P2Q8NHM4 247 aa9.21□□□□□ -0.94
TUBE1-208ENST00000604743 IGKV2-24A0A0C4DH68 120 aa9.2□□□□□ -0.94
TUBE1-208ENST00000604743 S100A1P23297 94 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms