RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	DIRC1	Q969H9	104 aa		11.03	□□□□□ -0.64
IRF3-231	ENST00000602190	ISOC2	Q96AB3	205 aa		11.03	□□□□□ -0.64
IRF3-231	ENST00000602190	NUDT11	Q96G61	164 aa		11.03	□□□□□ -0.64
IRF3-231	ENST00000602190	FAT4	Q6V0I7	4981 aa		11.03	□□□□□ -0.64
IRF3-231	ENST00000602190	IGLV1-50	A0A075B6I6	118 aa		11.02	□□□□□ -0.65
IRF3-231	ENST00000602190		H0Y9J4	135 aa		11.02	□□□□□ -0.65
IRF3-231	ENST00000602190		I3L3M4	83 aa		11.02	□□□□□ -0.65
IRF3-231	ENST00000602190	TSHB	P01222	138 aa		11.02	□□□□□ -0.65
IRF3-231	ENST00000602190	SS18	Q15532	418 aa		11.02	□□□□□ -0.65
IRF3-231	ENST00000602190	TWIST1	Q15672	202 aa		11.02	□□□□□ -0.65
IRF3-231	ENST00000602190	C1orf137	Q5JT78	98 aa		11.02	□□□□□ -0.65
IRF3-231	ENST00000602190	BTF3L4	Q96K17	158 aa		11.02	□□□□□ -0.65
IRF3-231	ENST00000602190	C2orf48	Q96LS8	159 aa		11.02	□□□□□ -0.65
IRF3-231	ENST00000602190	BIN3	Q9NQY0	253 aa		11.02	□□□□□ -0.65
IRF3-231	ENST00000602190	PHF5A	Q7RTV0	110 aa	Known RBP	11.01	□□□□□ -0.65
IRF3-231	ENST00000602190	KRTAP11-1	Q8IUC1	163 aa		11.01	□□□□□ -0.65
IRF3-231	ENST00000602190	TMEM101	Q96IK0	257 aa		11.01	□□□□□ -0.65
IRF3-231	ENST00000602190	GNG13	Q9P2W3	67 aa		11.01	□□□□□ -0.65
IRF3-231	ENST00000602190		A0A0U1RQV1	116 aa		11	□□□□□ -0.65
IRF3-231	ENST00000602190	KRTAP9-6	A0A140TA67	174 aa		11	□□□□□ -0.65
IRF3-231	ENST00000602190	FOXA3	P55318	350 aa	Predicted RBP	11	□□□□□ -0.65
IRF3-231	ENST00000602190	EIF5A	P63241	154 aa	Known RBP	11	□□□□□ -0.65
IRF3-231	ENST00000602190	RNF151	Q2KHN1	245 aa		11	□□□□□ -0.65
IRF3-231	ENST00000602190	EIF5AL1	Q6IS14	154 aa	Known RBP	11	□□□□□ -0.65
IRF3-231	ENST00000602190	POLR2K	P53803	58 aa	Known RBP	10.99	□□□□□ -0.65
IRF3-231	ENST00000602190	HMSD	A8MTL9	139 aa		10.98	□□□□□ -0.65
IRF3-231	ENST00000602190	BCL2L11	O43521	198 aa		10.98	□□□□□ -0.65
IRF3-231	ENST00000602190	PDE6D	O43924	150 aa		10.98	□□□□□ -0.65
IRF3-231	ENST00000602190	MRAP2	Q96G30	205 aa		10.98	□□□□□ -0.65
IRF3-231	ENST00000602190	RPP21	Q9H633	154 aa	Known RBP	10.98	□□□□□ -0.65
IRF3-231	ENST00000602190	CSDC2	Q9Y534	153 aa	Known RBP	10.98	□□□□□ -0.65
IRF3-231	ENST00000602190	TRBV27	A0A0K0K1C4	114 aa		10.97	□□□□□ -0.65
IRF3-231	ENST00000602190	SMLR1	H3BR10	107 aa		10.97	□□□□□ -0.65
IRF3-231	ENST00000602190	CAMK2N2	Q96S95	79 aa		10.97	□□□□□ -0.65
IRF3-231	ENST00000602190	C1orf196	B1AJZ1	125 aa		10.96	□□□□□ -0.65
IRF3-231	ENST00000602190		K7EN84	100 aa		10.96	□□□□□ -0.65
IRF3-231	ENST00000602190	COX7A2L	O14548	114 aa		10.96	□□□□□ -0.65
IRF3-231	ENST00000602190	PMCH	P20382	165 aa		10.96	□□□□□ -0.65
IRF3-231	ENST00000602190	TMEM242	Q9NWH2	141 aa		10.96	□□□□□ -0.65
IRF3-231	ENST00000602190	RNASE7	Q9H1E1	156 aa	Known RBP	10.95	□□□□□ -0.66
IRF3-231	ENST00000602190	C7orf77	A4D0Y5	90 aa		10.93	□□□□□ -0.66
IRF3-231	ENST00000602190	TLX1NB	P0CAT3	122 aa		10.93	□□□□□ -0.66
IRF3-231	ENST00000602190	RPL18A	Q02543	176 aa	Known RBP	10.93	□□□□□ -0.66
IRF3-231	ENST00000602190	KRTAP7-1	Q8IUC3	87 aa		10.93	□□□□□ -0.66
IRF3-231	ENST00000602190	TSKU	Q8WUA8	353 aa		10.93	□□□□□ -0.66
IRF3-231	ENST00000602190	MED9	Q9NWA0	146 aa		10.93	□□□□□ -0.66
IRF3-231	ENST00000602190	MRPL35	Q9NZE8	188 aa	Known RBP	10.93	□□□□□ -0.66
IRF3-231	ENST00000602190	MAL	P21145	153 aa		10.92	□□□□□ -0.66
IRF3-231	ENST00000602190	SMIM15	Q7Z3B0	74 aa		10.92	□□□□□ -0.66
IRF3-231	ENST00000602190	ST20	Q9HBF5	79 aa		10.92	□□□□□ -0.66
IRF3-231	ENST00000602190	KANTR	A0A1W2PQU2	76 aa		10.91	□□□□□ -0.66
IRF3-231	ENST00000602190		F8WDY8	70 aa		10.91	□□□□□ -0.66
IRF3-231	ENST00000602190	RPL13A	P40429	203 aa	Known RBP	10.91	□□□□□ -0.66
IRF3-231	ENST00000602190	PRR4	Q16378	134 aa		10.91	□□□□□ -0.66
IRF3-231	ENST00000602190	OCC1	Q8TAD7	63 aa		10.91	□□□□□ -0.66
IRF3-231	ENST00000602190	OPRPN	Q99935	248 aa	Predicted RBP	10.91	□□□□□ -0.66
IRF3-231	ENST00000602190	UBE2D4	Q9Y2X8	147 aa		10.91	□□□□□ -0.66
IRF3-231	ENST00000602190	OR10D4P	Q8NGN7	298 aa		10.9	□□□□□ -0.66
IRF3-231	ENST00000602190		A0A087WZ39	114 aa		10.89	□□□□□ -0.67
IRF3-231	ENST00000602190	FAM168B	A1KXE4	195 aa		10.89	□□□□□ -0.67
IRF3-231	ENST00000602190	SPAG11B	Q08648	103 aa		10.89	□□□□□ -0.67
IRF3-231	ENST00000602190	FAM231D	Q6ZW35	169 aa		10.89	□□□□□ -0.67
IRF3-231	ENST00000602190	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.89	□□□□□ -0.67
IRF3-231	ENST00000602190	TMEM191A	Q9H0A3	160 aa		10.88	□□□□□ -0.67
IRF3-231	ENST00000602190	TEX46	H3BTG2	121 aa		10.87	□□□□□ -0.67
IRF3-231	ENST00000602190	CT83	Q5H943	113 aa		10.87	□□□□□ -0.67
IRF3-231	ENST00000602190	C5orf38	Q86SI9	138 aa		10.87	□□□□□ -0.67
IRF3-231	ENST00000602190	FAM104A	Q969W3	186 aa		10.87	□□□□□ -0.67
IRF3-231	ENST00000602190	TIMM21	Q9BVV7	248 aa		10.87	□□□□□ -0.67
IRF3-231	ENST00000602190	RAB4A	P20338	218 aa		10.86	□□□□□ -0.67
IRF3-231	ENST00000602190	IMMP2L	Q96T52	175 aa		10.86	□□□□□ -0.67
IRF3-231	ENST00000602190	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.85	□□□□□ -0.67
IRF3-231	ENST00000602190		A8MWL6	223 aa		10.85	□□□□□ -0.67
IRF3-231	ENST00000602190	TAGLN2	P37802	199 aa	Known RBP	10.85	□□□□□ -0.67
IRF3-231	ENST00000602190	C10orf25	Q5T742	122 aa		10.85	□□□□□ -0.67
IRF3-231	ENST00000602190		Q6ZUT4	128 aa		10.85	□□□□□ -0.67
IRF3-231	ENST00000602190	TRAV13-1	A0A0B4J241	112 aa		10.84	□□□□□ -0.67
IRF3-231	ENST00000602190	RNASE13	Q5GAN3	156 aa	Known RBP	10.84	□□□□□ -0.67
IRF3-231	ENST00000602190	SMDT1	Q9H4I9	107 aa		10.84	□□□□□ -0.67
IRF3-231	ENST00000602190	UBE2D1	P51668	147 aa		10.83	□□□□□ -0.68
IRF3-231	ENST00000602190	SMAGP	Q0VAQ4	97 aa		10.83	□□□□□ -0.68
IRF3-231	ENST00000602190	NRAC	Q8N912	160 aa		10.83	□□□□□ -0.68
IRF3-231	ENST00000602190	C6orf48	Q9UBA6	75 aa		10.83	□□□□□ -0.68
IRF3-231	ENST00000602190	VCY	O14598	125 aa		10.82	□□□□□ -0.68
IRF3-231	ENST00000602190	GATC	O43716	136 aa	Known RBP	10.82	□□□□□ -0.68
IRF3-231	ENST00000602190	TMEM241	Q24JQ0	296 aa		10.82	□□□□□ -0.68
IRF3-231	ENST00000602190	NDUFA1	O15239	70 aa		10.81	□□□□□ -0.68
IRF3-231	ENST00000602190	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.81	□□□□□ -0.68
IRF3-231	ENST00000602190		A0A1B0GUT8	65 aa		10.8	□□□□□ -0.68
IRF3-231	ENST00000602190	SUMO2	P61956	95 aa	Known RBP	10.8	□□□□□ -0.68
IRF3-231	ENST00000602190	KIAA0087	Q14695	138 aa		10.8	□□□□□ -0.68
IRF3-231	ENST00000602190	UNQ6190/PRO20217	Q6UXQ8	127 aa		10.8	□□□□□ -0.68
IRF3-231	ENST00000602190	AMN1	Q8IY45	258 aa		10.8	□□□□□ -0.68
IRF3-231	ENST00000602190	ORAOV1	Q8WV07	137 aa		10.8	□□□□□ -0.68
IRF3-231	ENST00000602190	TMEM250	H0YL14	139 aa		10.79	□□□□□ -0.68
IRF3-231	ENST00000602190		M0QXV9	152 aa		10.79	□□□□□ -0.68
IRF3-231	ENST00000602190	BATF3	Q9NR55	127 aa		10.79	□□□□□ -0.68
IRF3-231	ENST00000602190	HIGD1C	A8MV81	97 aa		10.78	□□□□□ -0.68
IRF3-231	ENST00000602190	FCER1G	P30273	86 aa		10.78	□□□□□ -0.68
IRF3-231	ENST00000602190	RGS21	Q2M5E4	152 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms