RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	HOXD3	P31249	432 aa	Predicted RBP	11.98	□□□□□ -0.49
CAPN12-211	ENST00000601685	SHISA2	Q6UWI4	295 aa		11.98	□□□□□ -0.49
CAPN12-211	ENST00000601685	NRGN	Q92686	78 aa		11.98	□□□□□ -0.49
CAPN12-211	ENST00000601685	IGHV3OR16-12	A0A075B7B8	117 aa		11.97	□□□□□ -0.49
CAPN12-211	ENST00000601685	HERVK_113	P63121	156 aa		11.97	□□□□□ -0.49
CAPN12-211	ENST00000601685	DGAT2L7P	Q6IED9	249 aa		11.97	□□□□□ -0.49
CAPN12-211	ENST00000601685	SOSTDC1	Q6X4U4	206 aa		11.97	□□□□□ -0.49
CAPN12-211	ENST00000601685	PKD1L2	Q7Z442	2459 aa		11.97	□□□□□ -0.49
CAPN12-211	ENST00000601685	HERV-K104	P63124	156 aa		11.96	□□□□□ -0.49
CAPN12-211	ENST00000601685	ZNF625	Q96I27	306 aa	Predicted RBP	11.96	□□□□□ -0.49
CAPN12-211	ENST00000601685	LINC01587	Q99440	93 aa		11.96	□□□□□ -0.49
CAPN12-211	ENST00000601685	ACACB	O00763	2458 aa		11.96	□□□□□ -0.49
CAPN12-211	ENST00000601685	FAM236A	A0A1B0GUQ0	79 aa		11.96	□□□□□ -0.5
CAPN12-211	ENST00000601685	FAM236B	A0A1B0GV22	79 aa		11.96	□□□□□ -0.5
CAPN12-211	ENST00000601685	LINC00242	Q5T6M2	205 aa		11.96	□□□□□ -0.5
CAPN12-211	ENST00000601685		Q8N2B8	174 aa		11.96	□□□□□ -0.5
CAPN12-211	ENST00000601685	COPS9	Q8WXC6	57 aa		11.96	□□□□□ -0.5
CAPN12-211	ENST00000601685	CREBBP	Q92793	2442 aa		11.95	□□□□□ -0.5
CAPN12-211	ENST00000601685		A0A0U1RRA0	63 aa		11.95	□□□□□ -0.5
CAPN12-211	ENST00000601685	C11orf72	Q8NBR9	251 aa		11.95	□□□□□ -0.5
CAPN12-211	ENST00000601685	SMCR5	Q8TEV8	140 aa		11.95	□□□□□ -0.5
CAPN12-211	ENST00000601685	BEAN1	Q3B7T3	259 aa		11.95	□□□□□ -0.5
CAPN12-211	ENST00000601685	TRAC	P01848	142 aa		11.94	□□□□□ -0.5
CAPN12-211	ENST00000601685	LINC00643	Q86TS7	51 aa		11.94	□□□□□ -0.5
CAPN12-211	ENST00000601685	TMEM126A	Q9H061	195 aa		11.94	□□□□□ -0.5
CAPN12-211	ENST00000601685	CFAP46	Q8IYW2	2715 aa		11.94	□□□□□ -0.5
CAPN12-211	ENST00000601685	RS1	O15537	224 aa		11.94	□□□□□ -0.5
CAPN12-211	ENST00000601685	DAZ2	Q13117	558 aa	Known RBP	11.94	□□□□□ -0.5
CAPN12-211	ENST00000601685	FAM19A3	Q7Z5A8	133 aa		11.94	□□□□□ -0.5
CAPN12-211	ENST00000601685	DAZ4	Q86SG3	579 aa	Known RBP	11.94	□□□□□ -0.5
CAPN12-211	ENST00000601685	DAZ3	Q9NR90	486 aa	Known RBP	11.94	□□□□□ -0.5
CAPN12-211	ENST00000601685	FLNC	Q14315	2725 aa		11.94	□□□□□ -0.5
CAPN12-211	ENST00000601685	SMIM1	B2RUZ4	78 aa		11.93	□□□□□ -0.5
CAPN12-211	ENST00000601685	SDIM1	Q6ZPB5	146 aa		11.93	□□□□□ -0.5
CAPN12-211	ENST00000601685	DOPEY1	Q5JWR5	2465 aa		11.93	□□□□□ -0.5
CAPN12-211	ENST00000601685	USP9X	Q93008	2570 aa	Predicted RBP	11.93	□□□□□ -0.5
CAPN12-211	ENST00000601685	MAPK1IP1L	Q8NDC0	245 aa		11.92	□□□□□ -0.5
CAPN12-211	ENST00000601685	UBE2E2	Q96LR5	201 aa		11.92	□□□□□ -0.5
CAPN12-211	ENST00000601685	USP9Y	O00507	2555 aa	Predicted RBP	11.92	□□□□□ -0.5
CAPN12-211	ENST00000601685	BAALC-AS2	P0C853	105 aa		11.92	□□□□□ -0.5
CAPN12-211	ENST00000601685	C22orf24	Q9Y442	160 aa		11.91	□□□□□ -0.5
CAPN12-211	ENST00000601685	ZAN	Q9Y493	2812 aa		11.91	□□□□□ -0.5
CAPN12-211	ENST00000601685	UTP20	O75691	2785 aa	Known RBP	11.91	□□□□□ -0.5
CAPN12-211	ENST00000601685	PRIMA1	Q86XR5	153 aa		11.9	□□□□□ -0.5
CAPN12-211	ENST00000601685	C3orf56	Q8N813	242 aa		11.9	□□□□□ -0.5
CAPN12-211	ENST00000601685	LINC00694	P0DN24	101 aa		11.9	□□□□□ -0.5
CAPN12-211	ENST00000601685	NDUFA7	O95182	113 aa		11.89	□□□□□ -0.51
CAPN12-211	ENST00000601685	SLURP1	P55000	103 aa		11.89	□□□□□ -0.51
CAPN12-211	ENST00000601685	LINC01356	Q8N9X3	169 aa		11.89	□□□□□ -0.51
CAPN12-211	ENST00000601685	FAM218A	Q96MZ4	157 aa		11.89	□□□□□ -0.51
CAPN12-211	ENST00000601685	PEMT	Q9UBM1	199 aa		11.89	□□□□□ -0.51
CAPN12-211	ENST00000601685	FAM222A	Q5U5X8	452 aa		11.89	□□□□□ -0.51
CAPN12-211	ENST00000601685	PPDPF	Q9H3Y8	114 aa		11.89	□□□□□ -0.51
CAPN12-211	ENST00000601685	CSDC2	Q9Y534	153 aa	Known RBP	11.88	□□□□□ -0.51
CAPN12-211	ENST00000601685	TRAV13-1	A0A0B4J241	112 aa		11.87	□□□□□ -0.51
CAPN12-211	ENST00000601685		F5H768	121 aa		11.87	□□□□□ -0.51
CAPN12-211	ENST00000601685	INS	P01308	110 aa		11.87	□□□□□ -0.51
CAPN12-211	ENST00000601685	C3orf22	Q8N5N4	141 aa		11.87	□□□□□ -0.51
CAPN12-211	ENST00000601685	MAP6D1	Q9H9H5	199 aa		11.87	□□□□□ -0.51
CAPN12-211	ENST00000601685	DSCR9	P59020	149 aa		11.86	□□□□□ -0.51
CAPN12-211	ENST00000601685	DEFB136	Q30KP8	78 aa		11.86	□□□□□ -0.51
CAPN12-211	ENST00000601685	VPREB3	Q9UKI3	123 aa		11.86	□□□□□ -0.51
CAPN12-211	ENST00000601685	ATP5G1	P05496	136 aa		11.86	□□□□□ -0.51
CAPN12-211	ENST00000601685	CXCL5	P42830	114 aa		11.86	□□□□□ -0.51
CAPN12-211	ENST00000601685	C5orf38	Q86SI9	138 aa		11.86	□□□□□ -0.51
CAPN12-211	ENST00000601685	ZNF702P	Q9H963	129 aa		11.86	□□□□□ -0.51
CAPN12-211	ENST00000601685	INAFM2	P0DMQ5	153 aa		11.85	□□□□□ -0.51
CAPN12-211	ENST00000601685	HIST2H2BC	Q6DN03	193 aa		11.85	□□□□□ -0.51
CAPN12-211	ENST00000601685	HIST2H2BD	Q6DRA6	164 aa		11.85	□□□□□ -0.51
CAPN12-211	ENST00000601685	C18orf65	Q6ZTR6	163 aa		11.85	□□□□□ -0.51
CAPN12-211	ENST00000601685	POLQ	O75417	2590 aa		11.85	□□□□□ -0.51
CAPN12-211	ENST00000601685	ANKRD17	O75179	2603 aa	Known RBP	11.84	□□□□□ -0.51
CAPN12-211	ENST00000601685	C9orf153	Q5TBE3	101 aa		11.84	□□□□□ -0.51
CAPN12-211	ENST00000601685	NTM-AS1	Q6ZSK4	140 aa		11.84	□□□□□ -0.51
CAPN12-211	ENST00000601685		A0A096LNT2	108 aa		11.84	□□□□□ -0.51
CAPN12-211	ENST00000601685	UQCRQ	O14949	82 aa		11.84	□□□□□ -0.51
CAPN12-211	ENST00000601685	RPL28	P46779	137 aa	Known RBP	11.84	□□□□□ -0.51
CAPN12-211	ENST00000601685	CDC42SE2	Q9NRR3	84 aa		11.84	□□□□□ -0.51
CAPN12-211	ENST00000601685	PF4	P02776	101 aa		11.83	□□□□□ -0.52
CAPN12-211	ENST00000601685	EPG5	Q9HCE0	2579 aa		11.83	□□□□□ -0.52
CAPN12-211	ENST00000601685	TRAV13-2	A0A0B4J235	113 aa		11.83	□□□□□ -0.52
CAPN12-211	ENST00000601685	RPL36A	P83881	106 aa	Known RBP	11.83	□□□□□ -0.52
CAPN12-211	ENST00000601685	RPL36AL	Q969Q0	106 aa	Known RBP	11.83	□□□□□ -0.52
CAPN12-211	ENST00000601685	ZFYVE26	Q68DK2	2539 aa		11.83	□□□□□ -0.52
CAPN12-211	ENST00000601685	MXRA5	Q9NR99	2828 aa		11.83	□□□□□ -0.52
CAPN12-211	ENST00000601685	MAL	P21145	153 aa		11.82	□□□□□ -0.52
CAPN12-211	ENST00000601685	GAGE2A	Q6NT46	116 aa		11.82	□□□□□ -0.52
CAPN12-211	ENST00000601685	LINC00526	Q96FQ7	95 aa		11.82	□□□□□ -0.52
CAPN12-211	ENST00000601685		Q96MF0	132 aa		11.82	□□□□□ -0.52
CAPN12-211	ENST00000601685		Q9HAA7	133 aa		11.82	□□□□□ -0.52
CAPN12-211	ENST00000601685	MYO18B	Q8IUG5	2567 aa		11.81	□□□□□ -0.52
CAPN12-211	ENST00000601685		J3QLI3	93 aa		11.81	□□□□□ -0.52
CAPN12-211	ENST00000601685	IGSF10	Q6WRI0	2623 aa		11.81	□□□□□ -0.52
CAPN12-211	ENST00000601685	FBN2	P35556	2912 aa		11.81	□□□□□ -0.52
CAPN12-211	ENST00000601685	TRBV10-1	A0A0K0K1A3	114 aa		11.81	□□□□□ -0.52
CAPN12-211	ENST00000601685		K7EQD1	137 aa		11.81	□□□□□ -0.52
CAPN12-211	ENST00000601685		Q6YL49	198 aa		11.81	□□□□□ -0.52
CAPN12-211	ENST00000601685	IL17D	Q8TAD2	202 aa		11.81	□□□□□ -0.52
CAPN12-211	ENST00000601685	TRGV1	A0A0A0MS02	117 aa		11.8	□□□□□ -0.52
CAPN12-211	ENST00000601685	CRP	P02741	224 aa		11.8	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms