RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 PHF5AQ7RTV0 110 aaKnown RBP10.17□□□□□ -0.78
USE1-208ENST00000600970 BIN3Q9NQY0 253 aa10.17□□□□□ -0.78
USE1-208ENST00000600970 EIF5AP63241 154 aaKnown RBP10.16□□□□□ -0.78
USE1-208ENST00000600970 EIF5AL1Q6IS14 154 aaKnown RBP10.16□□□□□ -0.78
USE1-208ENST00000600970 DIRC1Q969H9 104 aa10.16□□□□□ -0.78
USE1-208ENST00000600970 CDC42SE2Q9NRR3 84 aa10.16□□□□□ -0.78
USE1-208ENST00000600970 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.15□□□□□ -0.78
USE1-208ENST00000600970 APOMO95445 188 aa10.15□□□□□ -0.78
USE1-208ENST00000600970 IGLV7-43P04211 117 aa10.15□□□□□ -0.78
USE1-208ENST00000600970 MEF2BQ02080 365 aaPredicted RBP10.15□□□□□ -0.78
USE1-208ENST00000600970 TEX261Q6UWH6 196 aa10.15□□□□□ -0.78
USE1-208ENST00000600970 TSHBP01222 138 aa10.14□□□□□ -0.79
USE1-208ENST00000600970 SMIM15Q7Z3B0 74 aa10.14□□□□□ -0.79
USE1-208ENST00000600970 MRPL52Q86TS9 123 aaKnown RBP10.14□□□□□ -0.79
USE1-208ENST00000600970 MRAP2Q96G30 205 aa10.14□□□□□ -0.79
USE1-208ENST00000600970 CAMK2N2Q96S95 79 aa10.14□□□□□ -0.79
USE1-208ENST00000600970 TRBV6-5A0A0K0K1A5 114 aa10.13□□□□□ -0.79
USE1-208ENST00000600970 MALP21145 153 aa10.13□□□□□ -0.79
USE1-208ENST00000600970 RPL18AQ02543 176 aaKnown RBP10.13□□□□□ -0.79
USE1-208ENST00000600970 RNASE7Q9H1E1 156 aaKnown RBP10.13□□□□□ -0.79
USE1-208ENST00000600970 RPP21Q9H633 154 aaKnown RBP10.13□□□□□ -0.79
USE1-208ENST00000600970 MED9Q9NWA0 146 aa10.13□□□□□ -0.79
USE1-208ENST00000600970 TMEM242Q9NWH2 141 aa10.13□□□□□ -0.79
USE1-208ENST00000600970 TRAV1-1A0A0B4J248 108 aa10.12□□□□□ -0.79
USE1-208ENST00000600970 A0A0U1RQV1 116 aa10.12□□□□□ -0.79
USE1-208ENST00000600970 H0Y9J4 135 aa10.12□□□□□ -0.79
USE1-208ENST00000600970 COX7A2LO14548 114 aa10.12□□□□□ -0.79
USE1-208ENST00000600970 BCL2L11O43521 198 aa10.12□□□□□ -0.79
USE1-208ENST00000600970 PDE6DO43924 150 aa10.12□□□□□ -0.79
USE1-208ENST00000600970 PRR4Q16378 134 aa10.12□□□□□ -0.79
USE1-208ENST00000600970 KANTRA0A1W2PQU2 76 aa10.11□□□□□ -0.79
USE1-208ENST00000600970 C2orf48Q96LS8 159 aa10.11□□□□□ -0.79
USE1-208ENST00000600970 OPRPNQ99935 248 aaPredicted RBP10.11□□□□□ -0.79
USE1-208ENST00000600970 IGLV1-50A0A075B6I6 118 aa10.1□□□□□ -0.79
USE1-208ENST00000600970 C1orf196B1AJZ1 125 aa10.1□□□□□ -0.79
USE1-208ENST00000600970 K7EN84 100 aa10.1□□□□□ -0.79
USE1-208ENST00000600970 KRTAP11-1Q8IUC1 163 aa10.1□□□□□ -0.79
USE1-208ENST00000600970 FAM210AQ96ND0 272 aa10.1□□□□□ -0.79
USE1-208ENST00000600970 ST20Q9HBF5 79 aa10.1□□□□□ -0.79
USE1-208ENST00000600970 HMSDA8MTL9 139 aa10.09□□□□□ -0.79
USE1-208ENST00000600970 KRTAP1-4P0C5Y4 121 aa10.09□□□□□ -0.79
USE1-208ENST00000600970 A0A087WZ39 114 aa10.08□□□□□ -0.8
USE1-208ENST00000600970 C7orf77A4D0Y5 90 aa10.08□□□□□ -0.8
USE1-208ENST00000600970 TEX46H3BTG2 121 aa10.08□□□□□ -0.8
USE1-208ENST00000600970 POLR2KP53803 58 aaKnown RBP10.08□□□□□ -0.8
USE1-208ENST00000600970 RNF151Q2KHN1 245 aa10.07□□□□□ -0.8
USE1-208ENST00000600970 C5orf38Q86SI9 138 aa10.07□□□□□ -0.8
USE1-208ENST00000600970 OCC1Q8TAD7 63 aa10.07□□□□□ -0.8
USE1-208ENST00000600970 TRBV27A0A0K0K1C4 114 aa10.06□□□□□ -0.8
USE1-208ENST00000600970 RNASE13Q5GAN3 156 aaKnown RBP10.06□□□□□ -0.8
USE1-208ENST00000600970 TSKUQ8WUA8 353 aa10.06□□□□□ -0.8
USE1-208ENST00000600970 TRAV13-1A0A0B4J241 112 aa10.05□□□□□ -0.8
USE1-208ENST00000600970 FAM168BA1KXE4 195 aa10.05□□□□□ -0.8
USE1-208ENST00000600970 SPAG11BQ08648 103 aa10.05□□□□□ -0.8
USE1-208ENST00000600970 LCE2AQ5TA79 106 aaPredicted RBP10.05□□□□□ -0.8
USE1-208ENST00000600970 CSDC2Q9Y534 153 aaKnown RBP10.05□□□□□ -0.8
USE1-208ENST00000600970 KRTAP9-6A0A140TA67 174 aa10.04□□□□□ -0.8
USE1-208ENST00000600970 UBE2D1P51668 147 aa10.04□□□□□ -0.8
USE1-208ENST00000600970 UBE2D4Q9Y2X8 147 aa10.04□□□□□ -0.8
USE1-208ENST00000600970 GATCO43716 136 aaKnown RBP10.03□□□□□ -0.8
USE1-208ENST00000600970 MRPL35Q9NZE8 188 aaKnown RBP10.03□□□□□ -0.8
USE1-208ENST00000600970 RPL13AP40429 203 aaKnown RBP10.02□□□□□ -0.81
USE1-208ENST00000600970 FAM19A5Q7Z5A7 132 aaPredicted RBP10.02□□□□□ -0.81
USE1-208ENST00000600970 OR10D4PQ8NGN7 298 aa10.02□□□□□ -0.81
USE1-208ENST00000600970 FAT4Q6V0I7 4981 aa10.02□□□□□ -0.81
USE1-208ENST00000600970 A8MWL6 223 aa10.01□□□□□ -0.81
USE1-208ENST00000600970 RAB4AP20338 218 aa10.01□□□□□ -0.81
USE1-208ENST00000600970 Q6ZUT4 128 aa10.01□□□□□ -0.81
USE1-208ENST00000600970 IMMP2LQ96T52 175 aa10.01□□□□□ -0.81
USE1-208ENST00000600970 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
USE1-208ENST00000600970 FCER1GP30273 86 aa10□□□□□ -0.81
USE1-208ENST00000600970 SMAGPQ0VAQ4 97 aa10□□□□□ -0.81
USE1-208ENST00000600970 C10orf25Q5T742 122 aa10□□□□□ -0.81
USE1-208ENST00000600970 KRTAP7-1Q8IUC3 87 aa10□□□□□ -0.81
USE1-208ENST00000600970 TMEM191AQ9H0A3 160 aa10□□□□□ -0.81
USE1-208ENST00000600970 F8WDY8 70 aa9.99□□□□□ -0.81
USE1-208ENST00000600970 VCYO14598 125 aa9.99□□□□□ -0.81
USE1-208ENST00000600970 FAM231DQ6ZW35 169 aa9.99□□□□□ -0.81
USE1-208ENST00000600970 ORAOV1Q8WV07 137 aa9.99□□□□□ -0.81
USE1-208ENST00000600970 BORCS7Q96B45 105 aa9.99□□□□□ -0.81
USE1-208ENST00000600970 NDUFA1O15239 70 aa9.98□□□□□ -0.81
USE1-208ENST00000600970 TAGLN2P37802 199 aaKnown RBP9.98□□□□□ -0.81
USE1-208ENST00000600970 RGS21Q2M5E4 152 aa9.98□□□□□ -0.81
USE1-208ENST00000600970 AMN1Q8IY45 258 aa9.98□□□□□ -0.81
USE1-208ENST00000600970 SMKR1H3BMG3 65 aa9.97□□□□□ -0.81
USE1-208ENST00000600970 UBE2BP63146 152 aa9.97□□□□□ -0.81
USE1-208ENST00000600970 GAGE2EQ4V326 116 aa9.97□□□□□ -0.81
USE1-208ENST00000600970 UNQ6190/PRO20217Q6UXQ8 127 aa9.97□□□□□ -0.81
USE1-208ENST00000600970 C6orf48Q9UBA6 75 aa9.97□□□□□ -0.81
USE1-208ENST00000600970 GAGE2DQ9UEU5 116 aa9.97□□□□□ -0.81
USE1-208ENST00000600970 CARHSP1Q9Y2V2 147 aaKnown RBP9.97□□□□□ -0.81
USE1-208ENST00000600970 A0A1B0GUT8 65 aa9.96□□□□□ -0.82
USE1-208ENST00000600970 M0QXV9 152 aa9.96□□□□□ -0.82
USE1-208ENST00000600970 TMEM241Q24JQ0 296 aa9.96□□□□□ -0.82
USE1-208ENST00000600970 CT83Q5H943 113 aa9.96□□□□□ -0.82
USE1-208ENST00000600970 TIMM21Q9BVV7 248 aa9.96□□□□□ -0.82
USE1-208ENST00000600970 SMDT1Q9H4I9 107 aa9.96□□□□□ -0.82
USE1-208ENST00000600970 IGHV3OR16-9A0A0B4J2B5 98 aa9.95□□□□□ -0.82
USE1-208ENST00000600970 TSPAN13O95857 204 aa9.95□□□□□ -0.82
USE1-208ENST00000600970 SUMO2P61956 95 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms