RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 S100A8P05109 93 aa10.87□□□□□ -0.67
NOTCH3-205ENST00000600841 FCER1GP30273 86 aa10.87□□□□□ -0.67
NOTCH3-205ENST00000600841 SUMO2P61956 95 aaKnown RBP10.87□□□□□ -0.67
NOTCH3-205ENST00000600841 CNBPP62633 177 aaKnown RBP10.87□□□□□ -0.67
NOTCH3-205ENST00000600841 MRPL51Q4U2R6 128 aaKnown RBP10.87□□□□□ -0.67
NOTCH3-205ENST00000600841 CFAP161Q6P656 301 aa10.87□□□□□ -0.67
NOTCH3-205ENST00000600841 CHCHD10Q8WYQ3 142 aaPredicted RBP10.87□□□□□ -0.67
NOTCH3-205ENST00000600841 MYCBP2O75592 4640 aa10.87□□□□□ -0.67
NOTCH3-205ENST00000600841 MT-ND4LP03901 98 aa10.86□□□□□ -0.67
NOTCH3-205ENST00000600841 MRPL54Q6P161 138 aaKnown RBP10.86□□□□□ -0.67
NOTCH3-205ENST00000600841 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.85□□□□□ -0.67
NOTCH3-205ENST00000600841 LINC00862A6NCI5 91 aa10.85□□□□□ -0.67
NOTCH3-205ENST00000600841 CKS2P33552 79 aa10.85□□□□□ -0.67
NOTCH3-205ENST00000600841 HBBP68871 147 aa10.85□□□□□ -0.67
NOTCH3-205ENST00000600841 MRPL52Q86TS9 123 aaKnown RBP10.85□□□□□ -0.67
NOTCH3-205ENST00000600841 KIR2DL4Q99706 377 aa10.85□□□□□ -0.67
NOTCH3-205ENST00000600841 C15orf56Q8N910 161 aa10.84□□□□□ -0.67
NOTCH3-205ENST00000600841 ANAPC16Q96DE5 110 aa10.84□□□□□ -0.67
NOTCH3-205ENST00000600841 C20orf78Q9BR46 151 aa10.84□□□□□ -0.67
NOTCH3-205ENST00000600841 A0A1B0GXF2 115 aa10.83□□□□□ -0.68
NOTCH3-205ENST00000600841 SMAGPQ0VAQ4 97 aa10.83□□□□□ -0.68
NOTCH3-205ENST00000600841 SDIM1Q6ZPB5 146 aa10.83□□□□□ -0.68
NOTCH3-205ENST00000600841 CDC42SE2Q9NRR3 84 aa10.83□□□□□ -0.68
NOTCH3-205ENST00000600841 DMBT1Q9UGM3 2413 aaPredicted RBP10.83□□□□□ -0.68
NOTCH3-205ENST00000600841 TRBV24-1A0A075B6N3 115 aa10.82□□□□□ -0.68
NOTCH3-205ENST00000600841 IGHV3-64A0A075B6Q5 118 aa10.82□□□□□ -0.68
NOTCH3-205ENST00000600841 LINC00959A0A1B0GUT2 108 aa10.82□□□□□ -0.68
NOTCH3-205ENST00000600841 SLPIP03973 132 aa10.82□□□□□ -0.68
NOTCH3-205ENST00000600841 ADCYAP1P18509 176 aa10.82□□□□□ -0.68
NOTCH3-205ENST00000600841 XCL1P47992 114 aa10.82□□□□□ -0.68
NOTCH3-205ENST00000600841 FOXI1Q12951 378 aa10.82□□□□□ -0.68
NOTCH3-205ENST00000600841 ZNF664Q8N3J9 261 aa10.82□□□□□ -0.68
NOTCH3-205ENST00000600841 SEC11CQ9BY50 192 aa10.82□□□□□ -0.68
NOTCH3-205ENST00000600841 D6R8Y8 96 aa10.81□□□□□ -0.68
NOTCH3-205ENST00000600841 CCL25O15444 150 aa10.81□□□□□ -0.68
NOTCH3-205ENST00000600841 TNFRSF6BO95407 300 aa10.81□□□□□ -0.68
NOTCH3-205ENST00000600841 SS18Q15532 418 aa10.81□□□□□ -0.68
NOTCH3-205ENST00000600841 HIGD2BQ4VC39 106 aa10.81□□□□□ -0.68
NOTCH3-205ENST00000600841 ATP5L2Q7Z4Y8 100 aa10.81□□□□□ -0.68
NOTCH3-205ENST00000600841 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.81□□□□□ -0.68
NOTCH3-205ENST00000600841 HERC1Q15751 4861 aa10.81□□□□□ -0.68
NOTCH3-205ENST00000600841 RPL32P62910 135 aaKnown RBP10.8□□□□□ -0.68
NOTCH3-205ENST00000600841 TMEM18Q96B42 140 aa10.8□□□□□ -0.68
NOTCH3-205ENST00000600841 CSDC2Q9Y534 153 aaKnown RBP10.8□□□□□ -0.68
NOTCH3-205ENST00000600841 GVQW2A0A096LPI5 108 aaPredicted RBP10.79□□□□□ -0.68
NOTCH3-205ENST00000600841 TCAPO15273 167 aa10.79□□□□□ -0.68
NOTCH3-205ENST00000600841 PPBPP02775 128 aa10.79□□□□□ -0.68
NOTCH3-205ENST00000600841 UBE2D4Q9Y2X8 147 aa10.79□□□□□ -0.68
NOTCH3-205ENST00000600841 PANO1I0J062 215 aa10.78□□□□□ -0.68
NOTCH3-205ENST00000600841 PHOX2AO14813 284 aa10.78□□□□□ -0.68
NOTCH3-205ENST00000600841 SMIM2Q9BVW6 85 aa10.78□□□□□ -0.68
NOTCH3-205ENST00000600841 IGHV1-58A0A0C4DH39 117 aa10.77□□□□□ -0.69
NOTCH3-205ENST00000600841 NPYP01303 97 aa10.77□□□□□ -0.69
NOTCH3-205ENST00000600841 CD164L2Q6UWJ8 174 aa10.77□□□□□ -0.69
NOTCH3-205ENST00000600841 C1orf196B1AJZ1 125 aa10.76□□□□□ -0.69
NOTCH3-205ENST00000600841 CIRBPQ14011 172 aaKnown RBP10.76□□□□□ -0.69
NOTCH3-205ENST00000600841 ORMDL3Q8N138 153 aa10.76□□□□□ -0.69
NOTCH3-205ENST00000600841 DPH3Q96FX2 82 aa10.76□□□□□ -0.69
NOTCH3-205ENST00000600841 TIMM21Q9BVV7 248 aa10.76□□□□□ -0.69
NOTCH3-205ENST00000600841 CTDSP1Q9GZU7 261 aa10.76□□□□□ -0.69
NOTCH3-205ENST00000600841 RNASE13Q5GAN3 156 aaKnown RBP10.75□□□□□ -0.69
NOTCH3-205ENST00000600841 TMEM136Q6ZRR5 245 aa10.75□□□□□ -0.69
NOTCH3-205ENST00000600841 KRTAP10-4P60372 401 aaPredicted RBP10.74□□□□□ -0.69
NOTCH3-205ENST00000600841 Q6ZUT4 128 aa10.74□□□□□ -0.69
NOTCH3-205ENST00000600841 PRELID3AQ96N28 172 aa10.74□□□□□ -0.69
NOTCH3-205ENST00000600841 TRAV13-1A0A0B4J241 112 aa10.73□□□□□ -0.69
NOTCH3-205ENST00000600841 CHTF8P0CG12 524 aa10.73□□□□□ -0.69
NOTCH3-205ENST00000600841 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
NOTCH3-205ENST00000600841 RPL39P62891 51 aaKnown RBP10.73□□□□□ -0.69
NOTCH3-205ENST00000600841 COX6A2Q02221 97 aa10.73□□□□□ -0.69
NOTCH3-205ENST00000600841 C10orf91Q5T1B1 145 aa10.73□□□□□ -0.69
NOTCH3-205ENST00000600841 SPACA4Q8TDM5 124 aa10.73□□□□□ -0.69
NOTCH3-205ENST00000600841 IMMP2LQ96T52 175 aa10.73□□□□□ -0.69
NOTCH3-205ENST00000600841 RPS10P5Q9NQ39 176 aa10.73□□□□□ -0.69
NOTCH3-205ENST00000600841 CARHSP1Q9Y2V2 147 aaKnown RBP10.73□□□□□ -0.69
NOTCH3-205ENST00000600841 COX7A2LO14548 114 aa10.72□□□□□ -0.69
NOTCH3-205ENST00000600841 RAB5AP20339 215 aa10.72□□□□□ -0.69
NOTCH3-205ENST00000600841 MALP21145 153 aa10.72□□□□□ -0.69
NOTCH3-205ENST00000600841 S100PP25815 95 aa10.72□□□□□ -0.69
NOTCH3-205ENST00000600841 NDUFA5Q16718 116 aa10.72□□□□□ -0.69
NOTCH3-205ENST00000600841 SPANXA1Q9NS26 97 aa10.72□□□□□ -0.69
NOTCH3-205ENST00000600841 ZNF561-AS1K7EIQ3 104 aa10.71□□□□□ -0.69
NOTCH3-205ENST00000600841 APOC3P02656 99 aa10.71□□□□□ -0.69
NOTCH3-205ENST00000600841 PRSS3P2Q8NHM4 247 aa10.71□□□□□ -0.69
NOTCH3-205ENST00000600841 LINC00526Q96FQ7 95 aa10.71□□□□□ -0.69
NOTCH3-205ENST00000600841 LAMTOR2Q9Y2Q5 125 aa10.71□□□□□ -0.69
NOTCH3-205ENST00000600841 A0A087WYN8 130 aa10.7□□□□□ -0.7
NOTCH3-205ENST00000600841 RHEBQ15382 184 aa10.7□□□□□ -0.7
NOTCH3-205ENST00000600841 CARD19Q96LW7 228 aa10.7□□□□□ -0.7
NOTCH3-205ENST00000600841 PKIGQ9Y2B9 76 aa10.7□□□□□ -0.7
NOTCH3-205ENST00000600841 IGKV2-24A0A0C4DH68 120 aa10.69□□□□□ -0.7
NOTCH3-205ENST00000600841 J3QL48 77 aa10.69□□□□□ -0.7
NOTCH3-205ENST00000600841 MAP1LC3AQ9H492 121 aa10.69□□□□□ -0.7
NOTCH3-205ENST00000600841 PKHD1L1Q86WI1 4243 aa10.69□□□□□ -0.7
NOTCH3-205ENST00000600841 LOC389332A0A1B0GUA5 103 aa10.68□□□□□ -0.7
NOTCH3-205ENST00000600841 MRPS36P82909 103 aaKnown RBP10.68□□□□□ -0.7
NOTCH3-205ENST00000600841 MAJINQ3KP22 176 aa10.68□□□□□ -0.7
NOTCH3-205ENST00000600841 PLAC8Q9NZF1 115 aa10.68□□□□□ -0.7
NOTCH3-205ENST00000600841 TRAV9-1A0A075B6T8 112 aa10.67□□□□□ -0.7
NOTCH3-205ENST00000600841 PRSS47A8MTI9 375 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms