RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	LINC00526	Q96FQ7	95 aa		13.63	□□□□□ -0.23
FARP1-231	ENST00000600648	TMEM191A	Q9H0A3	160 aa		13.63	□□□□□ -0.23
FARP1-231	ENST00000600648	PLA2G2D	Q9UNK4	145 aa		13.63	□□□□□ -0.23
FARP1-231	ENST00000600648	LINC00959	A0A1B0GUT2	108 aa		13.62	□□□□□ -0.23
FARP1-231	ENST00000600648	SMKR1	H3BMG3	65 aa		13.62	□□□□□ -0.23
FARP1-231	ENST00000600648	SRP19	P09132	144 aa	Known RBP	13.62	□□□□□ -0.23
FARP1-231	ENST00000600648	RAB4A	P20338	218 aa		13.62	□□□□□ -0.23
FARP1-231	ENST00000600648	FAM210A	Q96ND0	272 aa		13.62	□□□□□ -0.23
FARP1-231	ENST00000600648	OSTC	Q9NRP0	149 aa		13.62	□□□□□ -0.23
FARP1-231	ENST00000600648	C7orf33	Q8WU49	177 aa		13.61	□□□□□ -0.23
FARP1-231	ENST00000600648	POLR2K	P53803	58 aa	Known RBP	13.6	□□□□□ -0.23
FARP1-231	ENST00000600648		Q6ZRU5	148 aa		13.6	□□□□□ -0.23
FARP1-231	ENST00000600648		A0A1B0GVG6	124 aa		13.59	□□□□□ -0.23
FARP1-231	ENST00000600648	MT1HL1	P0DM35	61 aa		13.59	□□□□□ -0.23
FARP1-231	ENST00000600648	STPG4	Q8N801	248 aa		13.59	□□□□□ -0.23
FARP1-231	ENST00000600648		V9GYV3	84 aa		13.59	□□□□□ -0.23
FARP1-231	ENST00000600648	UBR4	Q5T4S7	5183 aa		13.59	□□□□□ -0.23
FARP1-231	ENST00000600648		A0A096LNI7	61 aa		13.58	□□□□□ -0.24
FARP1-231	ENST00000600648	IGHV1-58	A0A0C4DH39	117 aa		13.58	□□□□□ -0.24
FARP1-231	ENST00000600648	TRBV27	A0A0K0K1C4	114 aa		13.58	□□□□□ -0.24
FARP1-231	ENST00000600648	C7orf77	A4D0Y5	90 aa		13.58	□□□□□ -0.24
FARP1-231	ENST00000600648	RIG	Q13278	110 aa		13.58	□□□□□ -0.24
FARP1-231	ENST00000600648	SS18	Q15532	418 aa		13.58	□□□□□ -0.24
FARP1-231	ENST00000600648	NUP35	Q8NFH5	326 aa		13.58	□□□□□ -0.24
FARP1-231	ENST00000600648	CDC42SE2	Q9NRR3	84 aa		13.58	□□□□□ -0.24
FARP1-231	ENST00000600648	ZNF664	Q8N3J9	261 aa		13.57	□□□□□ -0.24
FARP1-231	ENST00000600648	FCER1G	P30273	86 aa		13.56	□□□□□ -0.24
FARP1-231	ENST00000600648	MRPL52	Q86TS9	123 aa	Known RBP	13.56	□□□□□ -0.24
FARP1-231	ENST00000600648	ISOC2	Q96AB3	205 aa		13.55	□□□□□ -0.24
FARP1-231	ENST00000600648	CARD19	Q96LW7	228 aa		13.55	□□□□□ -0.24
FARP1-231	ENST00000600648	VCY	O14598	125 aa		13.54	□□□□□ -0.24
FARP1-231	ENST00000600648	TMEM241	Q24JQ0	296 aa		13.54	□□□□□ -0.24
FARP1-231	ENST00000600648	RNASE13	Q5GAN3	156 aa	Known RBP	13.54	□□□□□ -0.24
FARP1-231	ENST00000600648	CD164L2	Q6UWJ8	174 aa		13.54	□□□□□ -0.24
FARP1-231	ENST00000600648	NRAC	Q8N912	160 aa		13.54	□□□□□ -0.24
FARP1-231	ENST00000600648	ZNF561-AS1	K7EIQ3	104 aa		13.53	□□□□□ -0.24
FARP1-231	ENST00000600648	RPL23	P62829	140 aa	Known RBP	13.53	□□□□□ -0.24
FARP1-231	ENST00000600648	ADIRF	Q15847	76 aa		13.53	□□□□□ -0.24
FARP1-231	ENST00000600648	TNXB	P22105	4242 aa		13.53	□□□□□ -0.24
FARP1-231	ENST00000600648	SUMO2	P61956	95 aa	Known RBP	13.52	□□□□□ -0.25
FARP1-231	ENST00000600648	PRR3	P79522	188 aa	Known RBP	13.52	□□□□□ -0.25
FARP1-231	ENST00000600648	SYCN	Q0VAF6	134 aa		13.51	□□□□□ -0.25
FARP1-231	ENST00000600648	NAT8B	Q9UHF3	227 aa		13.51	□□□□□ -0.25
FARP1-231	ENST00000600648		C9JQL5	133 aa		13.5	□□□□□ -0.25
FARP1-231	ENST00000600648	PPP1R17	O96001	155 aa		13.5	□□□□□ -0.25
FARP1-231	ENST00000600648	MAL	P21145	153 aa		13.5	□□□□□ -0.25
FARP1-231	ENST00000600648	CAMP	P49913	170 aa		13.5	□□□□□ -0.25
FARP1-231	ENST00000600648	MRPL51	Q4U2R6	128 aa	Known RBP	13.5	□□□□□ -0.25
FARP1-231	ENST00000600648	KIR2DL4	Q99706	377 aa		13.5	□□□□□ -0.25
FARP1-231	ENST00000600648	TRAV13-1	A0A0B4J241	112 aa		13.49	□□□□□ -0.25
FARP1-231	ENST00000600648	FAM74A3	Q4VXF1	159 aa		13.49	□□□□□ -0.25
FARP1-231	ENST00000600648	LINC00474	Q9P2X8	69 aa		13.49	□□□□□ -0.25
FARP1-231	ENST00000600648	UBE2D4	Q9Y2X8	147 aa		13.49	□□□□□ -0.25
FARP1-231	ENST00000600648	IGLV4-69	A0A075B6H9	119 aa		13.48	□□□□□ -0.25
FARP1-231	ENST00000600648	C1orf196	B1AJZ1	125 aa		13.48	□□□□□ -0.25
FARP1-231	ENST00000600648	COX7A2L	O14548	114 aa		13.48	□□□□□ -0.25
FARP1-231	ENST00000600648	FAM104B	Q5XKR9	115 aa		13.48	□□□□□ -0.25
FARP1-231	ENST00000600648		Q6ZUT4	128 aa		13.48	□□□□□ -0.25
FARP1-231	ENST00000600648	PKIG	Q9Y2B9	76 aa		13.48	□□□□□ -0.25
FARP1-231	ENST00000600648	SRSF3	P84103	164 aa	Known RBP	13.47	□□□□□ -0.25
FARP1-231	ENST00000600648	NAT8	Q9UHE5	227 aa		13.47	□□□□□ -0.25
FARP1-231	ENST00000600648	SMIM27	A0A1W2PRY6	76 aa		13.46	□□□□□ -0.25
FARP1-231	ENST00000600648	PPP1R2P9	O14990	202 aa		13.46	□□□□□ -0.25
FARP1-231	ENST00000600648	SMAGP	Q0VAQ4	97 aa		13.46	□□□□□ -0.25
FARP1-231	ENST00000600648	GAGE2B	Q13066	116 aa		13.46	□□□□□ -0.25
FARP1-231	ENST00000600648	C5orf38	Q86SI9	138 aa		13.46	□□□□□ -0.25
FARP1-231	ENST00000600648	CSDC2	Q9Y534	153 aa	Known RBP	13.46	□□□□□ -0.25
FARP1-231	ENST00000600648	CKS2	P33552	79 aa		13.45	□□□□□ -0.26
FARP1-231	ENST00000600648	PTTG1IP	P53801	180 aa		13.43	□□□□□ -0.26
FARP1-231	ENST00000600648	MRPL54	Q6P161	138 aa	Known RBP	13.43	□□□□□ -0.26
FARP1-231	ENST00000600648	CAMK2N2	Q96S95	79 aa		13.43	□□□□□ -0.26
FARP1-231	ENST00000600648	LOC107984640	A0A0U1RRK4	108 aa		13.42	□□□□□ -0.26
FARP1-231	ENST00000600648	RPL39	P62891	51 aa	Known RBP	13.42	□□□□□ -0.26
FARP1-231	ENST00000600648	PEA15	Q15121	130 aa		13.42	□□□□□ -0.26
FARP1-231	ENST00000600648	TMEM18	Q96B42	140 aa		13.42	□□□□□ -0.26
FARP1-231	ENST00000600648	C20orf78	Q9BR46	151 aa		13.42	□□□□□ -0.26
FARP1-231	ENST00000600648	LINC00862	A6NCI5	91 aa		13.41	□□□□□ -0.26
FARP1-231	ENST00000600648	TNFRSF6B	O95407	300 aa		13.41	□□□□□ -0.26
FARP1-231	ENST00000600648		D6R8Y8	96 aa		13.4	□□□□□ -0.26
FARP1-231	ENST00000600648	ODF1	Q14990	250 aa		13.4	□□□□□ -0.26
FARP1-231	ENST00000600648	LINC01600	Q96MT4	127 aa		13.4	□□□□□ -0.26
FARP1-231	ENST00000600648	TIMM21	Q9BVV7	248 aa		13.4	□□□□□ -0.26
FARP1-231	ENST00000600648	TRBV24-1	A0A075B6N3	115 aa		13.39	□□□□□ -0.27
FARP1-231	ENST00000600648		A0A1B0GW15	77 aa		13.39	□□□□□ -0.27
FARP1-231	ENST00000600648	SPAG11B	Q08648	103 aa		13.39	□□□□□ -0.27
FARP1-231	ENST00000600648	OPRPN	Q99935	248 aa	Predicted RBP	13.39	□□□□□ -0.27
FARP1-231	ENST00000600648		A0A0J9YXV3	536 aa		13.38	□□□□□ -0.27
FARP1-231	ENST00000600648		A0A1W2PNN7	141 aa		13.38	□□□□□ -0.27
FARP1-231	ENST00000600648	APOM	O95445	188 aa		13.38	□□□□□ -0.27
FARP1-231	ENST00000600648	HBB	P68871	147 aa		13.38	□□□□□ -0.27
FARP1-231	ENST00000600648		Q6ZRP5	223 aa		13.38	□□□□□ -0.27
FARP1-231	ENST00000600648	SMIM2	Q9BVW6	85 aa		13.38	□□□□□ -0.27
FARP1-231	ENST00000600648	TCAP	O15273	167 aa		13.37	□□□□□ -0.27
FARP1-231	ENST00000600648	NPY	P01303	97 aa		13.37	□□□□□ -0.27
FARP1-231	ENST00000600648	RPL32	P62910	135 aa	Known RBP	13.37	□□□□□ -0.27
FARP1-231	ENST00000600648	RPL18A	Q02543	176 aa	Known RBP	13.37	□□□□□ -0.27
FARP1-231	ENST00000600648	C2orf48	Q96LS8	159 aa		13.37	□□□□□ -0.27
FARP1-231	ENST00000600648		F8W036	122 aa		13.36	□□□□□ -0.27
FARP1-231	ENST00000600648	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	13.36	□□□□□ -0.27
FARP1-231	ENST00000600648	SPINK6	Q6UWN8	80 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms