RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 FAM229AH3BQW9 127 aa18.26■□□□□ 0.51
ZNF558-206ENST00000599938 MRPL52Q86TS9 123 aaKnown RBP18.26■□□□□ 0.51
ZNF558-206ENST00000599938 C20orf78Q9BR46 151 aa18.26■□□□□ 0.51
ZNF558-206ENST00000599938 SCXQ7RTU7 201 aa18.25■□□□□ 0.51
ZNF558-206ENST00000599938 ANAPC16Q96DE5 110 aa18.25■□□□□ 0.51
ZNF558-206ENST00000599938 TRBV24-1A0A075B6N3 115 aa18.24■□□□□ 0.51
ZNF558-206ENST00000599938 TNFRSF6BO95407 300 aa18.24■□□□□ 0.51
ZNF558-206ENST00000599938 C9orf163Q8N9P6 203 aa18.22■□□□□ 0.51
ZNF558-206ENST00000599938 CHAC1Q9BUX1 264 aa18.22■□□□□ 0.51
ZNF558-206ENST00000599938 AP5S1Q9NUS5 200 aa18.22■□□□□ 0.51
ZNF558-206ENST00000599938 SRRM2Q9UQ35 2752 aaKnown RBP18.22■□□□□ 0.51
ZNF558-206ENST00000599938 PPBPP02775 128 aa18.21■□□□□ 0.51
ZNF558-206ENST00000599938 RPL32P62910 135 aaKnown RBP18.21■□□□□ 0.51
ZNF558-206ENST00000599938 UQCC3Q6UW78 93 aa18.21■□□□□ 0.51
ZNF558-206ENST00000599938 C15orf56Q8N910 161 aa18.21■□□□□ 0.51
ZNF558-206ENST00000599938 SMIM2Q9BVW6 85 aa18.21■□□□□ 0.51
ZNF558-206ENST00000599938 CDC42SE2Q9NRR3 84 aa18.21■□□□□ 0.51
ZNF558-206ENST00000599938 NPYP01303 97 aa18.2■□□□□ 0.5
ZNF558-206ENST00000599938 CNBPP62633 177 aaKnown RBP18.2■□□□□ 0.5
ZNF558-206ENST00000599938 SMAGPQ0VAQ4 97 aa18.2■□□□□ 0.5
ZNF558-206ENST00000599938 CFAP161Q6P656 301 aa18.2■□□□□ 0.5
ZNF558-206ENST00000599938 LINC00959A0A1B0GUT2 108 aa18.19■□□□□ 0.5
ZNF558-206ENST00000599938 XCL1P47992 114 aa18.19■□□□□ 0.5
ZNF558-206ENST00000599938 ZNF664Q8N3J9 261 aa18.19■□□□□ 0.5
ZNF558-206ENST00000599938 PHOX2AO14813 284 aa18.18■□□□□ 0.5
ZNF558-206ENST00000599938 TCAPO15273 167 aa18.18■□□□□ 0.5
ZNF558-206ENST00000599938 ADCYAP1P18509 176 aa18.18■□□□□ 0.5
ZNF558-206ENST00000599938 ORMDL3Q8N138 153 aa18.18■□□□□ 0.5
ZNF558-206ENST00000599938 LINC00528Q8N1L1 170 aa18.18■□□□□ 0.5
ZNF558-206ENST00000599938 UBE2D4Q9Y2X8 147 aa18.18■□□□□ 0.5
ZNF558-206ENST00000599938 CCL25O15444 150 aa18.17■□□□□ 0.5
ZNF558-206ENST00000599938 INAFM2P0DMQ5 153 aa18.17■□□□□ 0.5
ZNF558-206ENST00000599938 FOXI1Q12951 378 aa18.17■□□□□ 0.5
ZNF558-206ENST00000599938 TMEM18Q96B42 140 aa18.17■□□□□ 0.5
ZNF558-206ENST00000599938 SS18Q15532 418 aa18.16■□□□□ 0.5
ZNF558-206ENST00000599938 CIRBP-AS1Q8TBR5 109 aa18.16■□□□□ 0.5
ZNF558-206ENST00000599938 CSDC2Q9Y534 153 aaKnown RBP18.16■□□□□ 0.5
ZNF558-206ENST00000599938 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.15■□□□□ 0.5
ZNF558-206ENST00000599938 TMEM218A2RU14 115 aa18.15■□□□□ 0.5
ZNF558-206ENST00000599938 HIGD2BQ4VC39 106 aa18.15■□□□□ 0.5
ZNF558-206ENST00000599938 PRELID3AQ96N28 172 aa18.15■□□□□ 0.5
ZNF558-206ENST00000599938 TMEM136Q6ZRR5 245 aa18.14■□□□□ 0.49
ZNF558-206ENST00000599938 SLPIP03973 132 aa18.13■□□□□ 0.49
ZNF558-206ENST00000599938 RNASE13Q5GAN3 156 aaKnown RBP18.13■□□□□ 0.49
ZNF558-206ENST00000599938 Q6ZUT4 128 aa18.12■□□□□ 0.49
ZNF558-206ENST00000599938 TIMM21Q9BVV7 248 aa18.12■□□□□ 0.49
ZNF558-206ENST00000599938 COMMD7Q86VX2 200 aa18.11■□□□□ 0.49
ZNF558-206ENST00000599938 IGHV3-64A0A075B6Q5 118 aa18.1■□□□□ 0.49
ZNF558-206ENST00000599938 GVQW2A0A096LPI5 108 aaPredicted RBP18.1■□□□□ 0.49
ZNF558-206ENST00000599938 PLA2G1BP04054 148 aaKnown RBP18.1■□□□□ 0.49
ZNF558-206ENST00000599938 RPL39P62891 51 aaKnown RBP18.1■□□□□ 0.49
ZNF558-206ENST00000599938 CD164L2Q6UWJ8 174 aa18.1■□□□□ 0.49
ZNF558-206ENST00000599938 SDIM1Q6ZPB5 146 aa18.1■□□□□ 0.49
ZNF558-206ENST00000599938 FLG2Q5D862 2391 aaPredicted RBP18.09■□□□□ 0.49
ZNF558-206ENST00000599938 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.09■□□□□ 0.49
ZNF558-206ENST00000599938 MYCBP2O75592 4640 aa18.08■□□□□ 0.49
ZNF558-206ENST00000599938 IMMP2LQ96T52 175 aa18.08■□□□□ 0.48
ZNF558-206ENST00000599938 LAMTOR2Q9Y2Q5 125 aa18.08■□□□□ 0.48
ZNF558-206ENST00000599938 IGHV1-58A0A0C4DH39 117 aa18.07■□□□□ 0.48
ZNF558-206ENST00000599938 SEC11CQ9BY50 192 aa18.07■□□□□ 0.48
ZNF558-206ENST00000599938 CTDSP1Q9GZU7 261 aa18.07■□□□□ 0.48
ZNF558-206ENST00000599938 TRAV13-1A0A0B4J241 112 aa18.06■□□□□ 0.48
ZNF558-206ENST00000599938 C1orf196B1AJZ1 125 aa18.06■□□□□ 0.48
ZNF558-206ENST00000599938 RAB5AP20339 215 aa18.06■□□□□ 0.48
ZNF558-206ENST00000599938 MAP1LC3AQ9H492 121 aa18.06■□□□□ 0.48
ZNF558-206ENST00000599938 SPANXA1Q9NS26 97 aa18.06■□□□□ 0.48
ZNF558-206ENST00000599938 PANO1I0J062 215 aa18.05■□□□□ 0.48
ZNF558-206ENST00000599938 LOC389332A0A1B0GUA5 103 aa18.03■□□□□ 0.48
ZNF558-206ENST00000599938 COX7A2LO14548 114 aa18.01■□□□□ 0.47
ZNF558-206ENST00000599938 PRSS47A8MTI9 375 aa18■□□□□ 0.47
ZNF558-206ENST00000599938 MALP21145 153 aa18■□□□□ 0.47
ZNF558-206ENST00000599938 LINC00526Q96FQ7 95 aa18■□□□□ 0.47
ZNF558-206ENST00000599938 DMBT1Q9UGM3 2413 aaPredicted RBP17.99■□□□□ 0.47
ZNF558-206ENST00000599938 TRAV9-1A0A075B6T8 112 aa17.99■□□□□ 0.47
ZNF558-206ENST00000599938 CHTF8P0CG12 524 aa17.99■□□□□ 0.47
ZNF558-206ENST00000599938 MRPS36P82909 103 aaKnown RBP17.99■□□□□ 0.47
ZNF558-206ENST00000599938 CIRBPQ14011 172 aaKnown RBP17.99■□□□□ 0.47
ZNF558-206ENST00000599938 OPRPNQ99935 248 aaPredicted RBP17.99■□□□□ 0.47
ZNF558-206ENST00000599938 IFI27P40305 119 aaPredicted RBP17.98■□□□□ 0.47
ZNF558-206ENST00000599938 FAM104AQ969W3 186 aa17.98■□□□□ 0.47
ZNF558-206ENST00000599938 ZNF561-AS1K7EIQ3 104 aa17.97■□□□□ 0.47
ZNF558-206ENST00000599938 S100PP25815 95 aa17.97■□□□□ 0.47
ZNF558-206ENST00000599938 COX6A2Q02221 97 aa17.97■□□□□ 0.47
ZNF558-206ENST00000599938 Q8N8P6 123 aa17.97■□□□□ 0.47
ZNF558-206ENST00000599938 IFITM10A6NMD0 228 aa17.96■□□□□ 0.47
ZNF558-206ENST00000599938 SPACA4Q8TDM5 124 aa17.96■□□□□ 0.47
ZNF558-206ENST00000599938 CARD19Q96LW7 228 aa17.96■□□□□ 0.47
ZNF558-206ENST00000599938 DPH3Q96FX2 82 aa17.95■□□□□ 0.46
ZNF558-206ENST00000599938 C5orf38Q86SI9 138 aa17.94■□□□□ 0.46
ZNF558-206ENST00000599938 PRSS3P2Q8NHM4 247 aa17.94■□□□□ 0.46
ZNF558-206ENST00000599938 C10orf91Q5T1B1 145 aa17.93■□□□□ 0.46
ZNF558-206ENST00000599938 CARHSP1Q9Y2V2 147 aaKnown RBP17.93■□□□□ 0.46
ZNF558-206ENST00000599938 PYGO1Q9Y3Y4 419 aa17.93■□□□□ 0.46
ZNF558-206ENST00000599938 IGKV2-24A0A0C4DH68 120 aa17.92■□□□□ 0.46
ZNF558-206ENST00000599938 IGLV4-3A0A075B6K6 122 aa17.91■□□□□ 0.46
ZNF558-206ENST00000599938 A0A087WYN8 130 aa17.91■□□□□ 0.46
ZNF558-206ENST00000599938 APOMO95445 188 aa17.91■□□□□ 0.46
ZNF558-206ENST00000599938 KRTAP10-4P60372 401 aaPredicted RBP17.91■□□□□ 0.46
ZNF558-206ENST00000599938 RPL37AP61513 92 aaKnown RBP17.91■□□□□ 0.46
ZNF558-206ENST00000599938 SYCNQ0VAF6 134 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms