RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 MLST8Q9BVC4 326 aa7.61□□□□□ -1.19
HOMER3-211ENST00000599808 KRTAP9-2Q9BYQ4 174 aa7.61□□□□□ -1.19
HOMER3-211ENST00000599808 GVQW2A0A096LPI5 108 aaPredicted RBP7.6□□□□□ -1.19
HOMER3-211ENST00000599808 IGKV3OR2-268A0A0C4DH90 116 aa7.6□□□□□ -1.19
HOMER3-211ENST00000599808 H7C1H1 209 aa7.6□□□□□ -1.19
HOMER3-211ENST00000599808 FAM231DQ6ZW35 169 aa7.6□□□□□ -1.19
HOMER3-211ENST00000599808 OSTCQ9NRP0 149 aa7.6□□□□□ -1.19
HOMER3-211ENST00000599808 TRAV9-1A0A075B6T8 112 aa7.59□□□□□ -1.19
HOMER3-211ENST00000599808 TGIF2-C20orf24A0A0A6YYL0 155 aa7.59□□□□□ -1.19
HOMER3-211ENST00000599808 UBE2L6O14933 153 aa7.59□□□□□ -1.19
HOMER3-211ENST00000599808 S100PP25815 95 aa7.59□□□□□ -1.19
HOMER3-211ENST00000599808 BAGE2Q86Y30 109 aa7.59□□□□□ -1.19
HOMER3-211ENST00000599808 BTF3L4Q96K17 158 aa7.59□□□□□ -1.19
HOMER3-211ENST00000599808 PGLYRP4Q96LB8 373 aa7.59□□□□□ -1.19
HOMER3-211ENST00000599808 LINC00474Q9P2X8 69 aa7.59□□□□□ -1.19
HOMER3-211ENST00000599808 AMTP48728 403 aa7.58□□□□□ -1.2
HOMER3-211ENST00000599808 RASL11AQ6T310 242 aa7.58□□□□□ -1.2
HOMER3-211ENST00000599808 CHCHD10Q8WYQ3 142 aaPredicted RBP7.58□□□□□ -1.2
HOMER3-211ENST00000599808 BIN3Q9NQY0 253 aa7.58□□□□□ -1.2
HOMER3-211ENST00000599808 V9GYV3 84 aa7.58□□□□□ -1.2
HOMER3-211ENST00000599808 LOC105371267A0A1B0GV96 52 aa7.57□□□□□ -1.2
HOMER3-211ENST00000599808 C1orf196B1AJZ1 125 aa7.57□□□□□ -1.2
HOMER3-211ENST00000599808 TPPP3Q9BW30 176 aa7.57□□□□□ -1.2
HOMER3-211ENST00000599808 NIT2Q9NQR4 276 aa7.57□□□□□ -1.2
HOMER3-211ENST00000599808 FAM231BA6NCW3 169 aa7.56□□□□□ -1.2
HOMER3-211ENST00000599808 IGLC6P0CF74 106 aa7.56□□□□□ -1.2
HOMER3-211ENST00000599808 RAB5BP61020 215 aa7.56□□□□□ -1.2
HOMER3-211ENST00000599808 FOXI1Q12951 378 aa7.56□□□□□ -1.2
HOMER3-211ENST00000599808 COTL1Q14019 142 aa7.56□□□□□ -1.2
HOMER3-211ENST00000599808 LINC00526Q96FQ7 95 aa7.56□□□□□ -1.2
HOMER3-211ENST00000599808 C19orf71A6NCJ1 209 aa7.55□□□□□ -1.2
HOMER3-211ENST00000599808 CT83Q5H943 113 aa7.55□□□□□ -1.2
HOMER3-211ENST00000599808 FER1L6-AS1Q8NA97 138 aa7.55□□□□□ -1.2
HOMER3-211ENST00000599808 RNASE7Q9H1E1 156 aaKnown RBP7.55□□□□□ -1.2
HOMER3-211ENST00000599808 SMIM27A0A1W2PRY6 76 aa7.54□□□□□ -1.2
HOMER3-211ENST00000599808 NUDT10Q8NFP7 164 aa7.54□□□□□ -1.2
HOMER3-211ENST00000599808 NUDT11Q96G61 164 aa7.54□□□□□ -1.2
HOMER3-211ENST00000599808 CARD19Q96LW7 228 aa7.54□□□□□ -1.2
HOMER3-211ENST00000599808 PKIGQ9Y2B9 76 aa7.54□□□□□ -1.2
HOMER3-211ENST00000599808 GATCO43716 136 aaKnown RBP7.53□□□□□ -1.2
HOMER3-211ENST00000599808 CACNG7P62955 275 aa7.53□□□□□ -1.2
HOMER3-211ENST00000599808 NTF3P20783 257 aa7.52□□□□□ -1.21
HOMER3-211ENST00000599808 XCL1P47992 114 aa7.52□□□□□ -1.21
HOMER3-211ENST00000599808 AMMECR1LQ6DCA0 310 aa7.52□□□□□ -1.21
HOMER3-211ENST00000599808 RNASEKQ6P5S7 137 aaKnown RBP7.52□□□□□ -1.21
HOMER3-211ENST00000599808 ZNF664Q8N3J9 261 aa7.52□□□□□ -1.21
HOMER3-211ENST00000599808 TSKUQ8WUA8 353 aa7.52□□□□□ -1.21
HOMER3-211ENST00000599808 RPP21Q9H633 154 aaKnown RBP7.52□□□□□ -1.21
HOMER3-211ENST00000599808 PSORS1C2Q9UIG4 136 aa7.52□□□□□ -1.21
HOMER3-211ENST00000599808 FAT4Q6V0I7 4981 aa7.52□□□□□ -1.21
HOMER3-211ENST00000599808 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.51□□□□□ -1.21
HOMER3-211ENST00000599808 IGHV1-58A0A0C4DH39 117 aa7.51□□□□□ -1.21
HOMER3-211ENST00000599808 A0A1W2PNN7 141 aa7.51□□□□□ -1.21
HOMER3-211ENST00000599808 IGKV2-29A2NJV5 120 aaPredicted RBP7.51□□□□□ -1.21
HOMER3-211ENST00000599808 TRGC2P03986 189 aa7.51□□□□□ -1.21
HOMER3-211ENST00000599808 TRGC1P0CF51 173 aa7.51□□□□□ -1.21
HOMER3-211ENST00000599808 PTTG1IPP53801 180 aa7.51□□□□□ -1.21
HOMER3-211ENST00000599808 COX19Q49B96 90 aa7.51□□□□□ -1.21
HOMER3-211ENST00000599808 PRR26Q8N8Z3 221 aa7.51□□□□□ -1.21
HOMER3-211ENST00000599808 OR2D3Q8NGH3 330 aa7.51□□□□□ -1.21
HOMER3-211ENST00000599808 C5orf52A6NGY3 159 aa7.5□□□□□ -1.21
HOMER3-211ENST00000599808 CCL25O15444 150 aa7.5□□□□□ -1.21
HOMER3-211ENST00000599808 FGF6P10767 208 aa7.5□□□□□ -1.21
HOMER3-211ENST00000599808 RPS20P60866 119 aaKnown RBP7.5□□□□□ -1.21
HOMER3-211ENST00000599808 SYCNQ0VAF6 134 aa7.5□□□□□ -1.21
HOMER3-211ENST00000599808 GAGE2BQ13066 116 aa7.5□□□□□ -1.21
HOMER3-211ENST00000599808 LYZL1Q6UWQ5 148 aa7.5□□□□□ -1.21
HOMER3-211ENST00000599808 GATD1Q8NB37 220 aa7.5□□□□□ -1.21
HOMER3-211ENST00000599808 OR5A1Q8NGJ0 315 aa7.5□□□□□ -1.21
HOMER3-211ENST00000599808 TRAV26-2A0A0B4J265 109 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 A8MWL6 223 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 F2Z2F3 143 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 H7C423 109 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 HIST1H2BKO60814 126 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 MT-ND6P03923 174 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 HIST1H2BJP06899 126 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 HIST1H2BOP23527 126 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 HIST1H2BBP33778 126 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 HIST1H2BDP58876 126 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 HIST1H2BCP62807 126 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 HIST2H2BEQ16778 126 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.49□□□□□ -1.21
HOMER3-211ENST00000599808 HIST1H2BHQ93079 126 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 HIST1H2BNQ99877 126 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 HIST1H2BMQ99879 126 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 NAT8BQ9UHF3 227 aa7.49□□□□□ -1.21
HOMER3-211ENST00000599808 LINC00959A0A1B0GUT2 108 aa7.48□□□□□ -1.21
HOMER3-211ENST00000599808 ZNF561-AS1K7EIQ3 104 aa7.48□□□□□ -1.21
HOMER3-211ENST00000599808 NCR2O95944 276 aa7.48□□□□□ -1.21
HOMER3-211ENST00000599808 FOXA3P55318 350 aaPredicted RBP7.48□□□□□ -1.21
HOMER3-211ENST00000599808 C1orf137Q5JT78 98 aa7.48□□□□□ -1.21
HOMER3-211ENST00000599808 ATP5L2Q7Z4Y8 100 aa7.48□□□□□ -1.21
HOMER3-211ENST00000599808 NUP35Q8NFH5 326 aa7.48□□□□□ -1.21
HOMER3-211ENST00000599808 RPL39LQ96EH5 51 aaKnown RBP7.48□□□□□ -1.21
HOMER3-211ENST00000599808 GNB1LQ9BYB4 327 aa7.48□□□□□ -1.21
HOMER3-211ENST00000599808 A0A0U1RQV1 116 aa7.47□□□□□ -1.21
HOMER3-211ENST00000599808 LOC107984640A0A0U1RRK4 108 aa7.47□□□□□ -1.21
HOMER3-211ENST00000599808 A0A1B0GXF2 115 aa7.47□□□□□ -1.21
HOMER3-211ENST00000599808 APCSP02743 223 aa7.47□□□□□ -1.21
HOMER3-211ENST00000599808 S100A6P06703 90 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms