RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 GAGE12HA6NDE8 117 aa14.83□□□□□ -0.04
IRF3-220ENST00000598108 PPBPP02775 128 aa14.83□□□□□ -0.04
IRF3-220ENST00000598108 OR5A1Q8NGJ0 315 aa14.83□□□□□ -0.04
IRF3-220ENST00000598108 TMEM101Q96IK0 257 aa14.83□□□□□ -0.04
IRF3-220ENST00000598108 TMEM136Q6ZRR5 245 aa14.82□□□□□ -0.04
IRF3-220ENST00000598108 CHCHD10Q8WYQ3 142 aaPredicted RBP14.82□□□□□ -0.04
IRF3-220ENST00000598108 CDC42SE2Q9NRR3 84 aa14.82□□□□□ -0.04
IRF3-220ENST00000598108 PHOX2AO14813 284 aa14.81□□□□□ -0.04
IRF3-220ENST00000598108 Q6ZSA8 131 aa14.81□□□□□ -0.04
IRF3-220ENST00000598108 ORMDL3Q8N138 153 aa14.81□□□□□ -0.04
IRF3-220ENST00000598108 SMIM2Q9BVW6 85 aa14.81□□□□□ -0.04
IRF3-220ENST00000598108 PRELID3AQ96N28 172 aa14.8□□□□□ -0.04
IRF3-220ENST00000598108 IMMP2LQ96T52 175 aa14.8□□□□□ -0.04
IRF3-220ENST00000598108 LINC00959A0A1B0GUT2 108 aa14.79□□□□□ -0.04
IRF3-220ENST00000598108 SMR3BP02814 79 aaPredicted RBP14.79□□□□□ -0.04
IRF3-220ENST00000598108 ZNF664Q8N3J9 261 aa14.79□□□□□ -0.04
IRF3-220ENST00000598108 CLRN3Q8NCR9 226 aa14.79□□□□□ -0.04
IRF3-220ENST00000598108 CTDSP1Q9GZU7 261 aa14.79□□□□□ -0.04
IRF3-220ENST00000598108 UBE2D4Q9Y2X8 147 aa14.79□□□□□ -0.04
IRF3-220ENST00000598108 TCAPO15273 167 aa14.78□□□□□ -0.04
IRF3-220ENST00000598108 C10orf91Q5T1B1 145 aa14.78□□□□□ -0.04
IRF3-220ENST00000598108 DGAT2L7PQ6IED9 249 aa14.77□□□□□ -0.05
IRF3-220ENST00000598108 CSDC2Q9Y534 153 aaKnown RBP14.77□□□□□ -0.05
IRF3-220ENST00000598108 RPL39P62891 51 aaKnown RBP14.76□□□□□ -0.05
IRF3-220ENST00000598108 FOXI1Q12951 378 aa14.76□□□□□ -0.05
IRF3-220ENST00000598108 hDV102S1A0JD36 115 aa14.75□□□□□ -0.05
IRF3-220ENST00000598108 SLPIP03973 132 aa14.75□□□□□ -0.05
IRF3-220ENST00000598108 XCL1P47992 114 aa14.75□□□□□ -0.05
IRF3-220ENST00000598108 RNASE13Q5GAN3 156 aaKnown RBP14.75□□□□□ -0.05
IRF3-220ENST00000598108 C15orf56Q8N910 161 aa14.75□□□□□ -0.05
IRF3-220ENST00000598108 CCL25O15444 150 aa14.74□□□□□ -0.05
IRF3-220ENST00000598108 TIMM21Q9BVV7 248 aa14.74□□□□□ -0.05
IRF3-220ENST00000598108 CARHSP1Q9Y2V2 147 aaKnown RBP14.74□□□□□ -0.05
IRF3-220ENST00000598108 LOC389332A0A1B0GUA5 103 aa14.73□□□□□ -0.05
IRF3-220ENST00000598108 PRSS47A8MTI9 375 aa14.73□□□□□ -0.05
IRF3-220ENST00000598108 EPM2AB3EWF7 344 aa14.73□□□□□ -0.05
IRF3-220ENST00000598108 C9orf163Q8N9P6 203 aa14.73□□□□□ -0.05
IRF3-220ENST00000598108 FAM104AQ969W3 186 aa14.73□□□□□ -0.05
IRF3-220ENST00000598108 CNBPP62633 177 aaKnown RBP14.72□□□□□ -0.05
IRF3-220ENST00000598108 Q6ZUT4 128 aa14.72□□□□□ -0.05
IRF3-220ENST00000598108 TMEM18Q96B42 140 aa14.72□□□□□ -0.05
IRF3-220ENST00000598108 LAMTOR2Q9Y2Q5 125 aa14.72□□□□□ -0.05
IRF3-220ENST00000598108 SMAGPQ0VAQ4 97 aa14.71□□□□□ -0.05
IRF3-220ENST00000598108 SS18Q15532 418 aa14.71□□□□□ -0.05
IRF3-220ENST00000598108 CFAP161Q6P656 301 aa14.71□□□□□ -0.05
IRF3-220ENST00000598108 TRAV9-1A0A075B6T8 112 aa14.7□□□□□ -0.06
IRF3-220ENST00000598108 HIGD2BQ4VC39 106 aa14.7□□□□□ -0.06
IRF3-220ENST00000598108 OPRPNQ99935 248 aaPredicted RBP14.7□□□□□ -0.06
IRF3-220ENST00000598108 MAP1LC3AQ9H492 121 aa14.7□□□□□ -0.06
IRF3-220ENST00000598108 VPS13BQ7Z7G8 4022 aa14.7□□□□□ -0.06
IRF3-220ENST00000598108 RAB5AP20339 215 aa14.69□□□□□ -0.06
IRF3-220ENST00000598108 KIAA1644Q3SXP7 199 aa14.69□□□□□ -0.06
IRF3-220ENST00000598108 Q5VSD8 79 aa14.69□□□□□ -0.06
IRF3-220ENST00000598108 CD164L2Q6UWJ8 174 aa14.69□□□□□ -0.06
IRF3-220ENST00000598108 SCXQ7RTU7 201 aa14.69□□□□□ -0.06
IRF3-220ENST00000598108 CHAC1Q9BUX1 264 aa14.69□□□□□ -0.06
IRF3-220ENST00000598108 TRAV13-1A0A0B4J241 112 aa14.68□□□□□ -0.06
IRF3-220ENST00000598108 SDIM1Q6ZPB5 146 aa14.68□□□□□ -0.06
IRF3-220ENST00000598108 AP5S1Q9NUS5 200 aa14.68□□□□□ -0.06
IRF3-220ENST00000598108 S100PP25815 95 aa14.67□□□□□ -0.06
IRF3-220ENST00000598108 Q8N8P6 123 aa14.67□□□□□ -0.06
IRF3-220ENST00000598108 RPS10P5Q9NQ39 176 aa14.67□□□□□ -0.06
IRF3-220ENST00000598108 SPANXA1Q9NS26 97 aa14.67□□□□□ -0.06
IRF3-220ENST00000598108 C1orf196B1AJZ1 125 aa14.66□□□□□ -0.06
IRF3-220ENST00000598108 RHEBQ15382 184 aa14.66□□□□□ -0.06
IRF3-220ENST00000598108 CIRBP-AS1Q8TBR5 109 aa14.66□□□□□ -0.06
IRF3-220ENST00000598108 GVQW2A0A096LPI5 108 aaPredicted RBP14.65□□□□□ -0.06
IRF3-220ENST00000598108 PANO1I0J062 215 aa14.64□□□□□ -0.07
IRF3-220ENST00000598108 MRPS36P82909 103 aaKnown RBP14.64□□□□□ -0.07
IRF3-220ENST00000598108 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.64□□□□□ -0.07
IRF3-220ENST00000598108 LINC00526Q96FQ7 95 aa14.63□□□□□ -0.07
IRF3-220ENST00000598108 GNB1LQ9BYB4 327 aa14.63□□□□□ -0.07
IRF3-220ENST00000598108 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.62□□□□□ -0.07
IRF3-220ENST00000598108 IGHV1-58A0A0C4DH39 117 aa14.62□□□□□ -0.07
IRF3-220ENST00000598108 FAM229AH3BQW9 127 aa14.62□□□□□ -0.07
IRF3-220ENST00000598108 IGHV3-64A0A075B6Q5 118 aa14.61□□□□□ -0.07
IRF3-220ENST00000598108 APOC3P02656 99 aa14.61□□□□□ -0.07
IRF3-220ENST00000598108 IFI27P40305 119 aaPredicted RBP14.61□□□□□ -0.07
IRF3-220ENST00000598108 PYGO1Q9Y3Y4 419 aa14.61□□□□□ -0.07
IRF3-220ENST00000598108 LINC00528Q8N1L1 170 aa14.6□□□□□ -0.07
IRF3-220ENST00000598108 COX7A2LO14548 114 aa14.59□□□□□ -0.07
IRF3-220ENST00000598108 C5orf38Q86SI9 138 aa14.59□□□□□ -0.07
IRF3-220ENST00000598108 NXT2Q9NPJ8 142 aaKnown RBP14.59□□□□□ -0.07
IRF3-220ENST00000598108 IGLV4-3A0A075B6K6 122 aa14.58□□□□□ -0.08
IRF3-220ENST00000598108 C2orf66Q6UXQ4 117 aa14.58□□□□□ -0.08
IRF3-220ENST00000598108 SRRM2Q9UQ35 2752 aaKnown RBP14.58□□□□□ -0.08
IRF3-220ENST00000598108 IFITM10A6NMD0 228 aa14.57□□□□□ -0.08
IRF3-220ENST00000598108 ORMDL2Q53FV1 153 aa14.57□□□□□ -0.08
IRF3-220ENST00000598108 ALKBH7Q9BT30 221 aaPredicted RBP14.57□□□□□ -0.08
IRF3-220ENST00000598108 TGIF2-C20orf24A0A0A6YYL0 155 aa14.56□□□□□ -0.08
IRF3-220ENST00000598108 CHTF8P0CG12 524 aa14.56□□□□□ -0.08
IRF3-220ENST00000598108 INAFM2P0DMQ5 153 aa14.56□□□□□ -0.08
IRF3-220ENST00000598108 MALP21145 153 aa14.56□□□□□ -0.08
IRF3-220ENST00000598108 MRPL18Q9H0U6 180 aaKnown RBP14.56□□□□□ -0.08
IRF3-220ENST00000598108 CYSLTR1Q9Y271 337 aa14.56□□□□□ -0.08
IRF3-220ENST00000598108 K7EMI3 77 aa14.55□□□□□ -0.08
IRF3-220ENST00000598108 COX6A2Q02221 97 aa14.55□□□□□ -0.08
IRF3-220ENST00000598108 CIRBPQ14011 172 aaKnown RBP14.55□□□□□ -0.08
IRF3-220ENST00000598108 COX19Q49B96 90 aa14.55□□□□□ -0.08
IRF3-220ENST00000598108 ZC2HC1BQ5TFG8 222 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms