RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 PPP1R17O96001 155 aa9.64□□□□□ -0.87
LIG1-215ENST00000597901 DPH3Q96FX2 82 aa9.64□□□□□ -0.87
LIG1-215ENST00000597901 LINC00959A0A1B0GUT2 108 aa9.63□□□□□ -0.87
LIG1-215ENST00000597901 KRTAP29-1A8MX34 341 aaPredicted RBP9.63□□□□□ -0.87
LIG1-215ENST00000597901 FOXI1Q12951 378 aa9.63□□□□□ -0.87
LIG1-215ENST00000597901 MRPL51Q4U2R6 128 aaKnown RBP9.63□□□□□ -0.87
LIG1-215ENST00000597901 FAM104BQ5XKR9 115 aa9.63□□□□□ -0.87
LIG1-215ENST00000597901 MRPL52Q86TS9 123 aaKnown RBP9.63□□□□□ -0.87
LIG1-215ENST00000597901 NRACQ8N912 160 aa9.63□□□□□ -0.87
LIG1-215ENST00000597901 CDC42SE2Q9NRR3 84 aa9.63□□□□□ -0.87
LIG1-215ENST00000597901 CAMPP49913 170 aa9.62□□□□□ -0.87
LIG1-215ENST00000597901 SUMO2P61956 95 aaKnown RBP9.62□□□□□ -0.87
LIG1-215ENST00000597901 CIRBPQ14011 172 aaKnown RBP9.62□□□□□ -0.87
LIG1-215ENST00000597901 HIGD2BQ4VC39 106 aa9.62□□□□□ -0.87
LIG1-215ENST00000597901 ZNF664Q8N3J9 261 aa9.62□□□□□ -0.87
LIG1-215ENST00000597901 C7orf77A4D0Y5 90 aa9.61□□□□□ -0.87
LIG1-215ENST00000597901 CCL25O15444 150 aa9.61□□□□□ -0.87
LIG1-215ENST00000597901 FCER1GP30273 86 aa9.61□□□□□ -0.87
LIG1-215ENST00000597901 XCL1P47992 114 aa9.61□□□□□ -0.87
LIG1-215ENST00000597901 RPL37AP61513 92 aaKnown RBP9.61□□□□□ -0.87
LIG1-215ENST00000597901 A0A1B0GW15 77 aa9.6□□□□□ -0.87
LIG1-215ENST00000597901 LINC00862A6NCI5 91 aa9.6□□□□□ -0.87
LIG1-215ENST00000597901 CHTF8P0CG12 524 aa9.6□□□□□ -0.87
LIG1-215ENST00000597901 SS18Q15532 418 aa9.6□□□□□ -0.87
LIG1-215ENST00000597901 GVQW2A0A096LPI5 108 aaPredicted RBP9.59□□□□□ -0.87
LIG1-215ENST00000597901 PPP1R2P9O14990 202 aa9.59□□□□□ -0.87
LIG1-215ENST00000597901 CKS2P33552 79 aa9.59□□□□□ -0.87
LIG1-215ENST00000597901 COX6A2Q02221 97 aa9.59□□□□□ -0.87
LIG1-215ENST00000597901 KIR2DL4Q99706 377 aa9.59□□□□□ -0.87
LIG1-215ENST00000597901 TRBV24-1A0A075B6N3 115 aa9.58□□□□□ -0.88
LIG1-215ENST00000597901 A0A087WYN8 130 aa9.58□□□□□ -0.88
LIG1-215ENST00000597901 PRSS3P2Q8NHM4 247 aa9.58□□□□□ -0.88
LIG1-215ENST00000597901 C20orf78Q9BR46 151 aa9.58□□□□□ -0.88
LIG1-215ENST00000597901 CSDC2Q9Y534 153 aaKnown RBP9.58□□□□□ -0.88
LIG1-215ENST00000597901 IGHV1-58A0A0C4DH39 117 aa9.57□□□□□ -0.88
LIG1-215ENST00000597901 MRPL54Q6P161 138 aaKnown RBP9.57□□□□□ -0.88
LIG1-215ENST00000597901 CD164L2Q6UWJ8 174 aa9.57□□□□□ -0.88
LIG1-215ENST00000597901 SPACA4Q8TDM5 124 aa9.57□□□□□ -0.88
LIG1-215ENST00000597901 UBE2D4Q9Y2X8 147 aa9.57□□□□□ -0.88
LIG1-215ENST00000597901 TNFRSF6BO95407 300 aa9.56□□□□□ -0.88
LIG1-215ENST00000597901 OXTP01178 125 aa9.56□□□□□ -0.88
LIG1-215ENST00000597901 S100A8P05109 93 aa9.56□□□□□ -0.88
LIG1-215ENST00000597901 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
LIG1-215ENST00000597901 SMAGPQ0VAQ4 97 aa9.56□□□□□ -0.88
LIG1-215ENST00000597901 PLAC8Q9NZF1 115 aa9.56□□□□□ -0.88
LIG1-215ENST00000597901 A0A1B0GXF2 115 aa9.55□□□□□ -0.88
LIG1-215ENST00000597901 C1orf196B1AJZ1 125 aa9.55□□□□□ -0.88
LIG1-215ENST00000597901 F8W036 122 aa9.55□□□□□ -0.88
LIG1-215ENST00000597901 HNRNPA3P51991 378 aaKnown RBP9.55□□□□□ -0.88
LIG1-215ENST00000597901 HBBP68871 147 aa9.55□□□□□ -0.88
LIG1-215ENST00000597901 SERTAD4-AS1Q5TG53 156 aa9.55□□□□□ -0.88
LIG1-215ENST00000597901 LINC00526Q96FQ7 95 aa9.55□□□□□ -0.88
LIG1-215ENST00000597901 RNASE13Q5GAN3 156 aaKnown RBP9.54□□□□□ -0.88
LIG1-215ENST00000597901 TMEM18Q96B42 140 aa9.54□□□□□ -0.88
LIG1-215ENST00000597901 TIMM21Q9BVV7 248 aa9.54□□□□□ -0.88
LIG1-215ENST00000597901 D6R8Y8 96 aa9.53□□□□□ -0.88
LIG1-215ENST00000597901 MAJINQ3KP22 176 aa9.53□□□□□ -0.88
LIG1-215ENST00000597901 TRAV13-1A0A0B4J241 112 aa9.52□□□□□ -0.89
LIG1-215ENST00000597901 IGKV2-24A0A0C4DH68 120 aa9.52□□□□□ -0.89
LIG1-215ENST00000597901 ZNF561-AS1K7EIQ3 104 aa9.52□□□□□ -0.89
LIG1-215ENST00000597901 TCAPO15273 167 aa9.52□□□□□ -0.89
LIG1-215ENST00000597901 NPYP01303 97 aa9.52□□□□□ -0.89
LIG1-215ENST00000597901 PPBPP02775 128 aa9.52□□□□□ -0.89
LIG1-215ENST00000597901 RAB14P61106 215 aa9.52□□□□□ -0.89
LIG1-215ENST00000597901 LRP1Q07954 4544 aaKnown RBP9.52□□□□□ -0.89
LIG1-215ENST00000597901 COX7A2LO14548 114 aa9.51□□□□□ -0.89
LIG1-215ENST00000597901 PHOX2AO14813 284 aa9.51□□□□□ -0.89
LIG1-215ENST00000597901 MALP21145 153 aa9.51□□□□□ -0.89
LIG1-215ENST00000597901 RPL39P62891 51 aaKnown RBP9.51□□□□□ -0.89
LIG1-215ENST00000597901 SYCNQ0VAF6 134 aa9.51□□□□□ -0.89
LIG1-215ENST00000597901 TMEM136Q6ZRR5 245 aa9.51□□□□□ -0.89
LIG1-215ENST00000597901 ATP5L2Q7Z4Y8 100 aa9.51□□□□□ -0.89
LIG1-215ENST00000597901 SMIM2Q9BVW6 85 aa9.51□□□□□ -0.89
LIG1-215ENST00000597901 A0A096LNI7 61 aa9.5□□□□□ -0.89
LIG1-215ENST00000597901 Q6ZUT4 128 aa9.5□□□□□ -0.89
LIG1-215ENST00000597901 STPG4Q8N801 248 aa9.5□□□□□ -0.89
LIG1-215ENST00000597901 FAM104AQ969W3 186 aa9.5□□□□□ -0.89
LIG1-215ENST00000597901 CARD19Q96LW7 228 aa9.5□□□□□ -0.89
LIG1-215ENST00000597901 IGLV4-69A0A075B6H9 119 aa9.49□□□□□ -0.89
LIG1-215ENST00000597901 PNRC1Q12796 327 aaPredicted RBP9.49□□□□□ -0.89
LIG1-215ENST00000597901 C5orf38Q86SI9 138 aa9.49□□□□□ -0.89
LIG1-215ENST00000597901 ORMDL3Q8N138 153 aa9.49□□□□□ -0.89
LIG1-215ENST00000597901 OPRPNQ99935 248 aaPredicted RBP9.49□□□□□ -0.89
LIG1-215ENST00000597901 FAT3Q8TDW7 4589 aa9.48□□□□□ -0.89
LIG1-215ENST00000597901 MT-ND4LP03901 98 aa9.48□□□□□ -0.89
LIG1-215ENST00000597901 C7orf33Q8WU49 177 aa9.48□□□□□ -0.89
LIG1-215ENST00000597901 ANAPC16Q96DE5 110 aa9.48□□□□□ -0.89
LIG1-215ENST00000597901 PRELID3AQ96N28 172 aa9.48□□□□□ -0.89
LIG1-215ENST00000597901 LINC00474Q9P2X8 69 aa9.48□□□□□ -0.89
LIG1-215ENST00000597901 SPANXA1Q9NS26 97 aa9.47□□□□□ -0.89
LIG1-215ENST00000597901 PKIGQ9Y2B9 76 aa9.47□□□□□ -0.89
LIG1-215ENST00000597901 PRSS47A8MTI9 375 aa9.46□□□□□ -0.9
LIG1-215ENST00000597901 RAB5AP20339 215 aa9.46□□□□□ -0.9
LIG1-215ENST00000597901 MRPS36P82909 103 aaKnown RBP9.46□□□□□ -0.9
LIG1-215ENST00000597901 Q6ZRU5 148 aa9.46□□□□□ -0.9
LIG1-215ENST00000597901 APOMO95445 188 aa9.45□□□□□ -0.9
LIG1-215ENST00000597901 CLLU1Q5K131 121 aa9.45□□□□□ -0.9
LIG1-215ENST00000597901 C2orf48Q96LS8 159 aa9.45□□□□□ -0.9
LIG1-215ENST00000597901 PKHD1L1Q86WI1 4243 aa9.45□□□□□ -0.9
LIG1-215ENST00000597901 LOC389332A0A1B0GUA5 103 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms