RNA–Protein interactions for RNA: ENST00000597651.5

SOX2-OT-227, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 629 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-227ENST00000597651 ORMDL3Q8N138 153 aa8.97□□□□□ -0.97
SOX2-OT-227ENST00000597651 BAALCQ8WXS3 180 aa8.97□□□□□ -0.97
SOX2-OT-227ENST00000597651 IGLV5-52A0A0A0MRZ9 124 aa8.96□□□□□ -0.98
SOX2-OT-227ENST00000597651 FCER1GP30273 86 aa8.96□□□□□ -0.98
SOX2-OT-227ENST00000597651 RHEBQ15382 184 aa8.96□□□□□ -0.98
SOX2-OT-227ENST00000597651 AMMECR1LQ6DCA0 310 aa8.96□□□□□ -0.98
SOX2-OT-227ENST00000597651 KRTAP26-1Q6PEX3 210 aa8.96□□□□□ -0.98
SOX2-OT-227ENST00000597651 TMEM136Q6ZRR5 245 aa8.96□□□□□ -0.98
SOX2-OT-227ENST00000597651 KIR2DL4Q99706 377 aa8.96□□□□□ -0.98
SOX2-OT-227ENST00000597651 SMIM2Q9BVW6 85 aa8.96□□□□□ -0.98
SOX2-OT-227ENST00000597651 LRP1Q07954 4544 aaKnown RBP8.96□□□□□ -0.98
SOX2-OT-227ENST00000597651 IGLV10-54A0A075B6I4 117 aa8.95□□□□□ -0.98
SOX2-OT-227ENST00000597651 TRAV9-1A0A075B6T8 112 aa8.95□□□□□ -0.98
SOX2-OT-227ENST00000597651 PHOX2AO14813 284 aa8.95□□□□□ -0.98
SOX2-OT-227ENST00000597651 RNASEKQ6P5S7 137 aaKnown RBP8.95□□□□□ -0.98
SOX2-OT-227ENST00000597651 PRELID3AQ96N28 172 aa8.95□□□□□ -0.98
SOX2-OT-227ENST00000597651 RPS10P5Q9NQ39 176 aa8.95□□□□□ -0.98
SOX2-OT-227ENST00000597651 APOC3P02656 99 aa8.94□□□□□ -0.98
SOX2-OT-227ENST00000597651 ZNF25P17030 456 aaPredicted RBP8.94□□□□□ -0.98
SOX2-OT-227ENST00000597651 S100PP25815 95 aa8.94□□□□□ -0.98
SOX2-OT-227ENST00000597651 NTN5Q8WTR8 489 aaPredicted RBP8.94□□□□□ -0.98
SOX2-OT-227ENST00000597651 HLA-DQA1P01909 254 aa8.93□□□□□ -0.98
SOX2-OT-227ENST00000597651 MRPL52Q86TS9 123 aaKnown RBP8.93□□□□□ -0.98
SOX2-OT-227ENST00000597651 FAT3Q8TDW7 4589 aa8.92□□□□□ -0.98
SOX2-OT-227ENST00000597651 TRAV8-4A0A0B4J246 113 aa8.92□□□□□ -0.98
SOX2-OT-227ENST00000597651 IGKV3OR2-268A0A0C4DH90 116 aa8.92□□□□□ -0.98
SOX2-OT-227ENST00000597651 Q6ZSA8 131 aa8.92□□□□□ -0.98
SOX2-OT-227ENST00000597651 OR5A1Q8NGJ0 315 aa8.92□□□□□ -0.98
SOX2-OT-227ENST00000597651 LAMTOR2Q9Y2Q5 125 aa8.92□□□□□ -0.98
SOX2-OT-227ENST00000597651 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.91□□□□□ -0.98
SOX2-OT-227ENST00000597651 PRSS47A8MTI9 375 aa8.91□□□□□ -0.98
SOX2-OT-227ENST00000597651 TCAPO15273 167 aa8.91□□□□□ -0.98
SOX2-OT-227ENST00000597651 LINC01620Q4KN68 170 aa8.91□□□□□ -0.98
SOX2-OT-227ENST00000597651 SVBPQ8N300 66 aa8.91□□□□□ -0.98
SOX2-OT-227ENST00000597651 TMEM101Q96IK0 257 aa8.91□□□□□ -0.98
SOX2-OT-227ENST00000597651 UBE2D4Q9Y2X8 147 aa8.91□□□□□ -0.98
SOX2-OT-227ENST00000597651 USP17L23D6RBM5 183 aa8.9□□□□□ -0.98
SOX2-OT-227ENST00000597651 NDUFA5Q16718 116 aa8.9□□□□□ -0.98
SOX2-OT-227ENST00000597651 CDC42SE2Q9NRR3 84 aa8.9□□□□□ -0.98
SOX2-OT-227ENST00000597651 LOC389332A0A1B0GUA5 103 aa8.89□□□□□ -0.99
SOX2-OT-227ENST00000597651 SNAPINO95295 136 aa8.89□□□□□ -0.99
SOX2-OT-227ENST00000597651 RPL39P62891 51 aaKnown RBP8.89□□□□□ -0.99
SOX2-OT-227ENST00000597651 KIAA1644Q3SXP7 199 aa8.89□□□□□ -0.99
SOX2-OT-227ENST00000597651 ZNF664Q8N3J9 261 aa8.89□□□□□ -0.99
SOX2-OT-227ENST00000597651 GNB1LQ9BYB4 327 aa8.89□□□□□ -0.99
SOX2-OT-227ENST00000597651 MAP1LC3AQ9H492 121 aa8.89□□□□□ -0.99
SOX2-OT-227ENST00000597651 CSDC2Q9Y534 153 aaKnown RBP8.89□□□□□ -0.99
SOX2-OT-227ENST00000597651 SLC7A5P1Q8MH63 180 aa8.88□□□□□ -0.99
SOX2-OT-227ENST00000597651 CHCHD10Q8WYQ3 142 aaPredicted RBP8.88□□□□□ -0.99
SOX2-OT-227ENST00000597651 TGIF2-C20orf24A0A0A6YYL0 155 aa8.87□□□□□ -0.99
SOX2-OT-227ENST00000597651 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
SOX2-OT-227ENST00000597651 GAGE12HA6NDE8 117 aa8.87□□□□□ -0.99
SOX2-OT-227ENST00000597651 PRSS1P07477 247 aa8.87□□□□□ -0.99
SOX2-OT-227ENST00000597651 C14orf177Q52M58 125 aa8.87□□□□□ -0.99
SOX2-OT-227ENST00000597651 RNASE13Q5GAN3 156 aaKnown RBP8.87□□□□□ -0.99
SOX2-OT-227ENST00000597651 DGAT2L7PQ6IED9 249 aa8.87□□□□□ -0.99
SOX2-OT-227ENST00000597651 Q6ZUT4 128 aa8.87□□□□□ -0.99
SOX2-OT-227ENST00000597651 TMEM18Q96B42 140 aa8.87□□□□□ -0.99
SOX2-OT-227ENST00000597651 TIMM21Q9BVV7 248 aa8.87□□□□□ -0.99
SOX2-OT-227ENST00000597651 PKHD1L1Q86WI1 4243 aa8.87□□□□□ -0.99
SOX2-OT-227ENST00000597651 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
SOX2-OT-227ENST00000597651 RAB5AP20339 215 aa8.86□□□□□ -0.99
SOX2-OT-227ENST00000597651 KRTAP10-4P60372 401 aaPredicted RBP8.86□□□□□ -0.99
SOX2-OT-227ENST00000597651 SMAGPQ0VAQ4 97 aa8.86□□□□□ -0.99
SOX2-OT-227ENST00000597651 Q8N8P6 123 aa8.86□□□□□ -0.99
SOX2-OT-227ENST00000597651 FAM104AQ969W3 186 aa8.86□□□□□ -0.99
SOX2-OT-227ENST00000597651 MT-ND6P03923 174 aa8.85□□□□□ -0.99
SOX2-OT-227ENST00000597651 XCL1P47992 114 aa8.85□□□□□ -0.99
SOX2-OT-227ENST00000597651 FOXI1Q12951 378 aa8.85□□□□□ -0.99
SOX2-OT-227ENST00000597651 COX19Q49B96 90 aa8.85□□□□□ -0.99
SOX2-OT-227ENST00000597651 SPANXA1Q9NS26 97 aa8.85□□□□□ -0.99
SOX2-OT-227ENST00000597651 CCL25O15444 150 aa8.84□□□□□ -0.99
SOX2-OT-227ENST00000597651 IFI27P40305 119 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-227ENST00000597651 OPRPNQ99935 248 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-227ENST00000597651 ALKBH7Q9BT30 221 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-227ENST00000597651 MRPL18Q9H0U6 180 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-227ENST00000597651 NXT2Q9NPJ8 142 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-227ENST00000597651 SS18Q15532 418 aa8.83□□□□□ -1
SOX2-OT-227ENST00000597651 SCXQ7RTU7 201 aa8.83□□□□□ -1
SOX2-OT-227ENST00000597651 C15orf56Q8N910 161 aa8.83□□□□□ -1
SOX2-OT-227ENST00000597651 YPEL4Q96NS1 127 aa8.83□□□□□ -1
SOX2-OT-227ENST00000597651 HMCN2Q8NDA2 5059 aa8.83□□□□□ -1
SOX2-OT-227ENST00000597651 TRAV13-1A0A0B4J241 112 aa8.82□□□□□ -1
SOX2-OT-227ENST00000597651 hDV102S1A0JD36 115 aa8.82□□□□□ -1
SOX2-OT-227ENST00000597651 MRPS36P82909 103 aaKnown RBP8.82□□□□□ -1
SOX2-OT-227ENST00000597651 FABP9Q0Z7S8 132 aa8.82□□□□□ -1
SOX2-OT-227ENST00000597651 ORMDL2Q53FV1 153 aa8.82□□□□□ -1
SOX2-OT-227ENST00000597651 LINC00528Q8N1L1 170 aa8.82□□□□□ -1
SOX2-OT-227ENST00000597651 C1orf196B1AJZ1 125 aa8.81□□□□□ -1
SOX2-OT-227ENST00000597651 K7EMI3 77 aa8.81□□□□□ -1
SOX2-OT-227ENST00000597651 CD164L2Q6UWJ8 174 aa8.81□□□□□ -1
SOX2-OT-227ENST00000597651 C2orf66Q6UXQ4 117 aa8.81□□□□□ -1
SOX2-OT-227ENST00000597651 PYGO1Q9Y3Y4 419 aa8.81□□□□□ -1
SOX2-OT-227ENST00000597651 IGLV4-3A0A075B6K6 122 aa8.8□□□□□ -1
SOX2-OT-227ENST00000597651 CBLN2Q8IUK8 224 aa8.8□□□□□ -1
SOX2-OT-227ENST00000597651 CYSLTR1Q9Y271 337 aa8.8□□□□□ -1
SOX2-OT-227ENST00000597651 TRAPPC1Q9Y5R8 145 aa8.8□□□□□ -1
SOX2-OT-227ENST00000597651 LINC01546A6NGU7 62 aa8.79□□□□□ -1
SOX2-OT-227ENST00000597651 SLPIP03973 132 aa8.79□□□□□ -1
SOX2-OT-227ENST00000597651 CNBPP62633 177 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms