RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 NAT8Q9UHE5 227 aa6.57□□□□□ -1.36
SHKBP1-210ENST00000595874 A0A087WYN8 130 aa6.56□□□□□ -1.36
SHKBP1-210ENST00000595874 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
SHKBP1-210ENST00000595874 TRBV6-5A0A0K0K1A5 114 aa6.56□□□□□ -1.36
SHKBP1-210ENST00000595874 LINC00959A0A1B0GUT2 108 aa6.56□□□□□ -1.36
SHKBP1-210ENST00000595874 ESDP10768 282 aa6.56□□□□□ -1.36
SHKBP1-210ENST00000595874 CNBPP62633 177 aaKnown RBP6.56□□□□□ -1.36
SHKBP1-210ENST00000595874 MRPL51Q4U2R6 128 aaKnown RBP6.56□□□□□ -1.36
SHKBP1-210ENST00000595874 TEX261Q6UWH6 196 aa6.56□□□□□ -1.36
SHKBP1-210ENST00000595874 C7orf77A4D0Y5 90 aa6.55□□□□□ -1.36
SHKBP1-210ENST00000595874 KRTAP29-1A8MX34 341 aaPredicted RBP6.55□□□□□ -1.36
SHKBP1-210ENST00000595874 POLR2KP53803 58 aaKnown RBP6.55□□□□□ -1.36
SHKBP1-210ENST00000595874 PEA15Q15121 130 aa6.55□□□□□ -1.36
SHKBP1-210ENST00000595874 CFAP161Q6P656 301 aa6.55□□□□□ -1.36
SHKBP1-210ENST00000595874 NRACQ8N912 160 aa6.55□□□□□ -1.36
SHKBP1-210ENST00000595874 NAT8BQ9UHF3 227 aa6.55□□□□□ -1.36
SHKBP1-210ENST00000595874 TRAV13-1A0A0B4J241 112 aa6.54□□□□□ -1.36
SHKBP1-210ENST00000595874 SS18Q15532 418 aa6.54□□□□□ -1.36
SHKBP1-210ENST00000595874 FAM74A3Q4VXF1 159 aa6.54□□□□□ -1.36
SHKBP1-210ENST00000595874 Q6ZUT4 128 aa6.54□□□□□ -1.36
SHKBP1-210ENST00000595874 ZNF664Q8N3J9 261 aa6.54□□□□□ -1.36
SHKBP1-210ENST00000595874 SPACA4Q8TDM5 124 aa6.54□□□□□ -1.36
SHKBP1-210ENST00000595874 CDC42SE2Q9NRR3 84 aa6.54□□□□□ -1.36
SHKBP1-210ENST00000595874 LRP1Q07954 4544 aaKnown RBP6.54□□□□□ -1.36
SHKBP1-210ENST00000595874 A0A096LNI7 61 aa6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 H7C423 109 aa6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 VCYO14598 125 aa6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 PHOX2AO14813 284 aa6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 TCAPO15273 167 aa6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 ZNF25P17030 456 aaPredicted RBP6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 CKS2P33552 79 aa6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 SUMO2P61956 95 aaKnown RBP6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 RPL39P62891 51 aaKnown RBP6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 FAM104BQ5XKR9 115 aa6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 C5orf38Q86SI9 138 aa6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 STPG4Q8N801 248 aa6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 OPRPNQ99935 248 aaPredicted RBP6.53□□□□□ -1.36
SHKBP1-210ENST00000595874 TRBV27A0A0K0K1C4 114 aa6.52□□□□□ -1.37
SHKBP1-210ENST00000595874 SMIM27A0A1W2PRY6 76 aa6.52□□□□□ -1.37
SHKBP1-210ENST00000595874 D6R8Y8 96 aa6.52□□□□□ -1.37
SHKBP1-210ENST00000595874 NPYP01303 97 aa6.52□□□□□ -1.37
SHKBP1-210ENST00000595874 GVQW2A0A096LPI5 108 aaPredicted RBP6.51□□□□□ -1.37
SHKBP1-210ENST00000595874 IGHV1-58A0A0C4DH39 117 aa6.51□□□□□ -1.37
SHKBP1-210ENST00000595874 A0A0J9YXV3 536 aa6.51□□□□□ -1.37
SHKBP1-210ENST00000595874 NDUFS6O75380 124 aaKnown RBP6.51□□□□□ -1.37
SHKBP1-210ENST00000595874 TNFRSF6BO95407 300 aa6.51□□□□□ -1.37
SHKBP1-210ENST00000595874 MALP21145 153 aa6.51□□□□□ -1.37
SHKBP1-210ENST00000595874 GAGE2BQ13066 116 aa6.51□□□□□ -1.37
SHKBP1-210ENST00000595874 CARD19Q96LW7 228 aa6.51□□□□□ -1.37
SHKBP1-210ENST00000595874 KIR2DL4Q99706 377 aa6.51□□□□□ -1.37
SHKBP1-210ENST00000595874 UBE2D4Q9Y2X8 147 aa6.51□□□□□ -1.37
SHKBP1-210ENST00000595874 IGLV4-69A0A075B6H9 119 aa6.5□□□□□ -1.37
SHKBP1-210ENST00000595874 LOC389332A0A1B0GUA5 103 aa6.5□□□□□ -1.37
SHKBP1-210ENST00000595874 ZNF561-AS1K7EIQ3 104 aa6.5□□□□□ -1.37
SHKBP1-210ENST00000595874 CIRBPQ14011 172 aaKnown RBP6.5□□□□□ -1.37
SHKBP1-210ENST00000595874 ODF1Q14990 250 aa6.5□□□□□ -1.37
SHKBP1-210ENST00000595874 MRPL52Q86TS9 123 aaKnown RBP6.5□□□□□ -1.37
SHKBP1-210ENST00000595874 HBBP68871 147 aa6.49□□□□□ -1.37
SHKBP1-210ENST00000595874 SYCNQ0VAF6 134 aa6.49□□□□□ -1.37
SHKBP1-210ENST00000595874 CD164L2Q6UWJ8 174 aa6.49□□□□□ -1.37
SHKBP1-210ENST00000595874 Q6ZRU5 148 aa6.49□□□□□ -1.37
SHKBP1-210ENST00000595874 DMBT1Q9UGM3 2413 aaPredicted RBP6.49□□□□□ -1.37
SHKBP1-210ENST00000595874 COX7A2LO14548 114 aa6.48□□□□□ -1.37
SHKBP1-210ENST00000595874 PPP1R2P9O14990 202 aa6.48□□□□□ -1.37
SHKBP1-210ENST00000595874 ZC2HC1BQ5TFG8 222 aa6.48□□□□□ -1.37
SHKBP1-210ENST00000595874 C7orf33Q8WU49 177 aa6.48□□□□□ -1.37
SHKBP1-210ENST00000595874 CAMK2N2Q96S95 79 aa6.48□□□□□ -1.37
SHKBP1-210ENST00000595874 SMIM2Q9BVW6 85 aa6.48□□□□□ -1.37
SHKBP1-210ENST00000595874 PLAC8Q9NZF1 115 aa6.48□□□□□ -1.37
SHKBP1-210ENST00000595874 A0A1B0GXF2 115 aa6.47□□□□□ -1.37
SHKBP1-210ENST00000595874 OXTP01178 125 aa6.47□□□□□ -1.37
SHKBP1-210ENST00000595874 RPL18AQ02543 176 aaKnown RBP6.47□□□□□ -1.37
SHKBP1-210ENST00000595874 PRELID3AQ96N28 172 aa6.47□□□□□ -1.37
SHKBP1-210ENST00000595874 C1orf196B1AJZ1 125 aa6.46□□□□□ -1.38
SHKBP1-210ENST00000595874 F8W036 122 aa6.46□□□□□ -1.38
SHKBP1-210ENST00000595874 PPP1R17O96001 155 aa6.46□□□□□ -1.38
SHKBP1-210ENST00000595874 SPAG11BQ08648 103 aa6.46□□□□□ -1.38
SHKBP1-210ENST00000595874 TMEM136Q6ZRR5 245 aa6.46□□□□□ -1.38
SHKBP1-210ENST00000595874 TMEM18Q96B42 140 aa6.46□□□□□ -1.38
SHKBP1-210ENST00000595874 A0A1B0GW15 77 aa6.45□□□□□ -1.38
SHKBP1-210ENST00000595874 LINC00862A6NCI5 91 aa6.45□□□□□ -1.38
SHKBP1-210ENST00000595874 IFITM10A6NMD0 228 aa6.45□□□□□ -1.38
SHKBP1-210ENST00000595874 ORAOV1Q8WV07 137 aa6.45□□□□□ -1.38
SHKBP1-210ENST00000595874 FAM104AQ969W3 186 aa6.45□□□□□ -1.38
SHKBP1-210ENST00000595874 C20orf78Q9BR46 151 aa6.45□□□□□ -1.38
SHKBP1-210ENST00000595874 LOC107984640A0A0U1RRK4 108 aa6.44□□□□□ -1.38
SHKBP1-210ENST00000595874 A0A1W2PNN7 141 aa6.44□□□□□ -1.38
SHKBP1-210ENST00000595874 S100A8P05109 93 aa6.44□□□□□ -1.38
SHKBP1-210ENST00000595874 RAB14P61106 215 aa6.44□□□□□ -1.38
SHKBP1-210ENST00000595874 PRR3P79522 188 aaKnown RBP6.44□□□□□ -1.38
SHKBP1-210ENST00000595874 ORMDL3Q8N138 153 aa6.44□□□□□ -1.38
SHKBP1-210ENST00000595874 TRBV24-1A0A075B6N3 115 aa6.43□□□□□ -1.38
SHKBP1-210ENST00000595874 MT1HL1P0DM35 61 aa6.43□□□□□ -1.38
SHKBP1-210ENST00000595874 RAB5AP20339 215 aa6.43□□□□□ -1.38
SHKBP1-210ENST00000595874 PTTG1IPP53801 180 aa6.43□□□□□ -1.38
SHKBP1-210ENST00000595874 SMAGPQ0VAQ4 97 aa6.43□□□□□ -1.38
SHKBP1-210ENST00000595874 KIAA1644Q3SXP7 199 aa6.43□□□□□ -1.38
SHKBP1-210ENST00000595874 C10orf25Q5T742 122 aa6.43□□□□□ -1.38
SHKBP1-210ENST00000595874 PHF5AQ7RTV0 110 aaKnown RBP6.43□□□□□ -1.38
SHKBP1-210ENST00000595874 SMDT1Q9H4I9 107 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms