RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 BAALCQ8WXS3 180 aa11.77□□□□□ -0.53
HOMER3-208ENST00000595756 FCER1GP30273 86 aa11.76□□□□□ -0.53
HOMER3-208ENST00000595756 MPV17L2Q567V2 206 aa11.76□□□□□ -0.53
HOMER3-208ENST00000595756 Q8N976 141 aa11.76□□□□□ -0.53
HOMER3-208ENST00000595756 UBE2WQ96B02 151 aa11.76□□□□□ -0.53
HOMER3-208ENST00000595756 TSHBP01222 138 aa11.75□□□□□ -0.53
HOMER3-208ENST00000595756 NPYP01303 97 aa11.75□□□□□ -0.53
HOMER3-208ENST00000595756 ANGP03950 147 aaKnown RBP11.75□□□□□ -0.53
HOMER3-208ENST00000595756 RBX1P62877 108 aa11.75□□□□□ -0.53
HOMER3-208ENST00000595756 SMAGPQ0VAQ4 97 aa11.75□□□□□ -0.53
HOMER3-208ENST00000595756 PRSS47A8MTI9 375 aa11.74□□□□□ -0.53
HOMER3-208ENST00000595756 CRPP02741 224 aa11.74□□□□□ -0.53
HOMER3-208ENST00000595756 DEFB104AQ8WTQ1 72 aa11.74□□□□□ -0.53
HOMER3-208ENST00000595756 SMIM2Q9BVW6 85 aa11.74□□□□□ -0.53
HOMER3-208ENST00000595756 PLA2G1BP04054 148 aaKnown RBP11.73□□□□□ -0.53
HOMER3-208ENST00000595756 ESDP10768 282 aa11.73□□□□□ -0.53
HOMER3-208ENST00000595756 AMMECR1LQ6DCA0 310 aa11.73□□□□□ -0.53
HOMER3-208ENST00000595756 LINC00528Q8N1L1 170 aa11.73□□□□□ -0.53
HOMER3-208ENST00000595756 TMEM18Q96B42 140 aa11.73□□□□□ -0.53
HOMER3-208ENST00000595756 MAP1LC3AQ9H492 121 aa11.73□□□□□ -0.53
HOMER3-208ENST00000595756 ZNF25P17030 456 aaPredicted RBP11.72□□□□□ -0.53
HOMER3-208ENST00000595756 C1orf43Q9BWL3 253 aa11.72□□□□□ -0.53
HOMER3-208ENST00000595756 SMCO4Q9NRQ5 59 aa11.72□□□□□ -0.53
HOMER3-208ENST00000595756 RAB5AP20339 215 aa11.71□□□□□ -0.53
HOMER3-208ENST00000595756 TMEM101Q96IK0 257 aa11.71□□□□□ -0.53
HOMER3-208ENST00000595756 TGIF2-C20orf24A0A0A6YYL0 155 aa11.7□□□□□ -0.54
HOMER3-208ENST00000595756 FGF6P10767 208 aa11.7□□□□□ -0.54
HOMER3-208ENST00000595756 MIAQ16674 131 aa11.7□□□□□ -0.54
HOMER3-208ENST00000595756 C14orf177Q52M58 125 aa11.7□□□□□ -0.54
HOMER3-208ENST00000595756 SCXQ7RTU7 201 aa11.7□□□□□ -0.54
HOMER3-208ENST00000595756 PRR34Q9NV39 138 aa11.7□□□□□ -0.54
HOMER3-208ENST00000595756 PKHD1L1Q86WI1 4243 aa11.69□□□□□ -0.54
HOMER3-208ENST00000595756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.69□□□□□ -0.54
HOMER3-208ENST00000595756 IGKV2-29A2NJV5 120 aaPredicted RBP11.69□□□□□ -0.54
HOMER3-208ENST00000595756 K7EMI3 77 aa11.69□□□□□ -0.54
HOMER3-208ENST00000595756 FABP9Q0Z7S8 132 aa11.69□□□□□ -0.54
HOMER3-208ENST00000595756 LINC01620Q4KN68 170 aa11.69□□□□□ -0.54
HOMER3-208ENST00000595756 RNASEKQ6P5S7 137 aaKnown RBP11.69□□□□□ -0.54
HOMER3-208ENST00000595756 ENHOQ6UWT2 76 aa11.69□□□□□ -0.54
HOMER3-208ENST00000595756 MRPL52Q86TS9 123 aaKnown RBP11.69□□□□□ -0.54
HOMER3-208ENST00000595756 MRPL18Q9H0U6 180 aaKnown RBP11.69□□□□□ -0.54
HOMER3-208ENST00000595756 NXT2Q9NPJ8 142 aaKnown RBP11.69□□□□□ -0.54
HOMER3-208ENST00000595756 LINC00269Q8N2A0 174 aa11.68□□□□□ -0.54
HOMER3-208ENST00000595756 Q8N8P6 123 aa11.68□□□□□ -0.54
HOMER3-208ENST00000595756 C20orf203Q8NBC4 194 aa11.68□□□□□ -0.54
HOMER3-208ENST00000595756 TRAPPC1Q9Y5R8 145 aa11.68□□□□□ -0.54
HOMER3-208ENST00000595756 FAT3Q8TDW7 4589 aa11.68□□□□□ -0.54
HOMER3-208ENST00000595756 IGLV4-60A0A075B6I1 120 aa11.67□□□□□ -0.54
HOMER3-208ENST00000595756 TRAV8-4A0A0B4J246 113 aa11.67□□□□□ -0.54
HOMER3-208ENST00000595756 REG3AQ06141 175 aa11.67□□□□□ -0.54
HOMER3-208ENST00000595756 KIAA1644Q3SXP7 199 aa11.67□□□□□ -0.54
HOMER3-208ENST00000595756 DGAT2L7PQ6IED9 249 aa11.67□□□□□ -0.54
HOMER3-208ENST00000595756 CHAC1Q9BUX1 264 aa11.67□□□□□ -0.54
HOMER3-208ENST00000595756 CSDC2Q9Y534 153 aaKnown RBP11.67□□□□□ -0.54
HOMER3-208ENST00000595756 LOC389332A0A1B0GUA5 103 aa11.66□□□□□ -0.54
HOMER3-208ENST00000595756 G0S2P27469 103 aa11.66□□□□□ -0.54
HOMER3-208ENST00000595756 OR5A1Q8NGJ0 315 aa11.66□□□□□ -0.54
HOMER3-208ENST00000595756 TIMM21Q9BVV7 248 aa11.66□□□□□ -0.54
HOMER3-208ENST00000595756 LRP1Q07954 4544 aaKnown RBP11.66□□□□□ -0.54
HOMER3-208ENST00000595756 ORMDL2Q53FV1 153 aa11.65□□□□□ -0.54
HOMER3-208ENST00000595756 YPEL4Q96NS1 127 aa11.65□□□□□ -0.54
HOMER3-208ENST00000595756 ALKBH7Q9BT30 221 aaPredicted RBP11.65□□□□□ -0.54
HOMER3-208ENST00000595756 CBLN2Q8IUK8 224 aa11.64□□□□□ -0.55
HOMER3-208ENST00000595756 J3QL48 77 aa11.63□□□□□ -0.55
HOMER3-208ENST00000595756 PRSS3P2Q8NHM4 247 aa11.63□□□□□ -0.55
HOMER3-208ENST00000595756 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
HOMER3-208ENST00000595756 UBE2D4Q9Y2X8 147 aa11.63□□□□□ -0.55
HOMER3-208ENST00000595756 KRTAP29-1A8MX34 341 aaPredicted RBP11.62□□□□□ -0.55
HOMER3-208ENST00000595756 USP17L23D6RBM5 183 aa11.62□□□□□ -0.55
HOMER3-208ENST00000595756 CLPSL2Q6UWE3 100 aa11.62□□□□□ -0.55
HOMER3-208ENST00000595756 CDC42SE2Q9NRR3 84 aa11.62□□□□□ -0.55
HOMER3-208ENST00000595756 SPANXA1Q9NS26 97 aa11.62□□□□□ -0.55
HOMER3-208ENST00000595756 IFI27P40305 119 aaPredicted RBP11.61□□□□□ -0.55
HOMER3-208ENST00000595756 ZNF664Q8N3J9 261 aa11.61□□□□□ -0.55
HOMER3-208ENST00000595756 LINC01549A6NIU2 74 aa11.6□□□□□ -0.55
HOMER3-208ENST00000595756 CCL25O15444 150 aa11.6□□□□□ -0.55
HOMER3-208ENST00000595756 KRTAP10-4P60372 401 aaPredicted RBP11.6□□□□□ -0.55
HOMER3-208ENST00000595756 KRTAP26-1Q6PEX3 210 aa11.59□□□□□ -0.55
HOMER3-208ENST00000595756 CYSLTR1Q9Y271 337 aa11.59□□□□□ -0.55
HOMER3-208ENST00000595756 PYGO1Q9Y3Y4 419 aa11.59□□□□□ -0.55
HOMER3-208ENST00000595756 PRSS1P07477 247 aa11.58□□□□□ -0.56
HOMER3-208ENST00000595756 RPL39P62891 51 aaKnown RBP11.58□□□□□ -0.56
HOMER3-208ENST00000595756 IGLV10-54A0A075B6I4 117 aa11.57□□□□□ -0.56
HOMER3-208ENST00000595756 IGKV3OR2-268A0A0C4DH90 116 aa11.57□□□□□ -0.56
HOMER3-208ENST00000595756 NPSP0C0P6 89 aa11.57□□□□□ -0.56
HOMER3-208ENST00000595756 MRPS36P82909 103 aaKnown RBP11.57□□□□□ -0.56
HOMER3-208ENST00000595756 SS18Q15532 418 aa11.57□□□□□ -0.56
HOMER3-208ENST00000595756 C2orf66Q6UXQ4 117 aa11.57□□□□□ -0.56
HOMER3-208ENST00000595756 FA2HQ7L5A8 372 aa11.57□□□□□ -0.56
HOMER3-208ENST00000595756 LINC01546A6NGU7 62 aa11.56□□□□□ -0.56
HOMER3-208ENST00000595756 RAB5BP61020 215 aa11.56□□□□□ -0.56
HOMER3-208ENST00000595756 LINC00959A0A1B0GUT2 108 aa11.55□□□□□ -0.56
HOMER3-208ENST00000595756 C1orf196B1AJZ1 125 aa11.55□□□□□ -0.56
HOMER3-208ENST00000595756 C9orf163Q8N9P6 203 aa11.55□□□□□ -0.56
HOMER3-208ENST00000595756 CHCHD10Q8WYQ3 142 aaPredicted RBP11.55□□□□□ -0.56
HOMER3-208ENST00000595756 S100A1P23297 94 aa11.54□□□□□ -0.56
HOMER3-208ENST00000595756 PAPPA-AS1Q5QFB9 102 aa11.54□□□□□ -0.56
HOMER3-208ENST00000595756 C18orf32Q8TCD1 76 aa11.54□□□□□ -0.56
HOMER3-208ENST00000595756 HMCN2Q8NDA2 5059 aa11.54□□□□□ -0.56
HOMER3-208ENST00000595756 COLCA2A8K830 154 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms