RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 PPBPP02775 128 aa11.27□□□□□ -0.61
IRF3-208ENST00000594387 CLLU1Q5K131 121 aa11.27□□□□□ -0.61
IRF3-208ENST00000594387 ATP5L2Q7Z4Y8 100 aa11.27□□□□□ -0.61
IRF3-208ENST00000594387 NRACQ8N912 160 aa11.27□□□□□ -0.61
IRF3-208ENST00000594387 CHAC1Q9BUX1 264 aa11.27□□□□□ -0.61
IRF3-208ENST00000594387 PCLOQ9Y6V0 5065 aa11.27□□□□□ -0.61
IRF3-208ENST00000594387 HSPG2P98160 4391 aa11.26□□□□□ -0.61
IRF3-208ENST00000594387 SCXQ7RTU7 201 aa11.26□□□□□ -0.61
IRF3-208ENST00000594387 MRPL52Q86TS9 123 aaKnown RBP11.26□□□□□ -0.61
IRF3-208ENST00000594387 ZNF664Q8N3J9 261 aa11.26□□□□□ -0.61
IRF3-208ENST00000594387 TRBV24-1A0A075B6N3 115 aa11.25□□□□□ -0.61
IRF3-208ENST00000594387 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
IRF3-208ENST00000594387 LINC00528Q8N1L1 170 aa11.25□□□□□ -0.61
IRF3-208ENST00000594387 DPH3Q96FX2 82 aa11.25□□□□□ -0.61
IRF3-208ENST00000594387 IGHV3-64A0A075B6Q5 118 aa11.24□□□□□ -0.61
IRF3-208ENST00000594387 D6R8Y8 96 aa11.24□□□□□ -0.61
IRF3-208ENST00000594387 CNBPP62633 177 aaKnown RBP11.24□□□□□ -0.61
IRF3-208ENST00000594387 CDC42SE2Q9NRR3 84 aa11.24□□□□□ -0.61
IRF3-208ENST00000594387 LINC00959A0A1B0GUT2 108 aa11.23□□□□□ -0.61
IRF3-208ENST00000594387 A0A1B0GXF2 115 aa11.23□□□□□ -0.61
IRF3-208ENST00000594387 PHOX2AO14813 284 aa11.23□□□□□ -0.61
IRF3-208ENST00000594387 XCL1P47992 114 aa11.23□□□□□ -0.61
IRF3-208ENST00000594387 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
IRF3-208ENST00000594387 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
IRF3-208ENST00000594387 APOBP04114 4563 aaKnown RBP11.23□□□□□ -0.61
IRF3-208ENST00000594387 CCL25O15444 150 aa11.22□□□□□ -0.61
IRF3-208ENST00000594387 UQCC3Q6UW78 93 aa11.22□□□□□ -0.61
IRF3-208ENST00000594387 CIRBP-AS1Q8TBR5 109 aa11.22□□□□□ -0.61
IRF3-208ENST00000594387 CSDC2Q9Y534 153 aaKnown RBP11.22□□□□□ -0.61
IRF3-208ENST00000594387 C1orf196B1AJZ1 125 aa11.21□□□□□ -0.61
IRF3-208ENST00000594387 RAB5AP20339 215 aa11.21□□□□□ -0.61
IRF3-208ENST00000594387 TMEM136Q6ZRR5 245 aa11.21□□□□□ -0.61
IRF3-208ENST00000594387 SMIM2Q9BVW6 85 aa11.21□□□□□ -0.61
IRF3-208ENST00000594387 HIGD2BQ4VC39 106 aa11.2□□□□□ -0.62
IRF3-208ENST00000594387 PRELID3AQ96N28 172 aa11.2□□□□□ -0.62
IRF3-208ENST00000594387 UBE2D4Q9Y2X8 147 aa11.2□□□□□ -0.62
IRF3-208ENST00000594387 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
IRF3-208ENST00000594387 NPYP01303 97 aa11.19□□□□□ -0.62
IRF3-208ENST00000594387 FOXI1Q12951 378 aa11.19□□□□□ -0.62
IRF3-208ENST00000594387 CD164L2Q6UWJ8 174 aa11.19□□□□□ -0.62
IRF3-208ENST00000594387 SDIM1Q6ZPB5 146 aa11.19□□□□□ -0.62
IRF3-208ENST00000594387 C15orf56Q8N910 161 aa11.19□□□□□ -0.62
IRF3-208ENST00000594387 TIMM21Q9BVV7 248 aa11.19□□□□□ -0.62
IRF3-208ENST00000594387 PKIGQ9Y2B9 76 aa11.19□□□□□ -0.62
IRF3-208ENST00000594387 ZNF561-AS1K7EIQ3 104 aa11.18□□□□□ -0.62
IRF3-208ENST00000594387 MALP21145 153 aa11.18□□□□□ -0.62
IRF3-208ENST00000594387 LAMTOR2Q9Y2Q5 125 aa11.18□□□□□ -0.62
IRF3-208ENST00000594387 GVQW2A0A096LPI5 108 aaPredicted RBP11.17□□□□□ -0.62
IRF3-208ENST00000594387 TRAV13-1A0A0B4J241 112 aa11.16□□□□□ -0.62
IRF3-208ENST00000594387 IMMP2LQ96T52 175 aa11.16□□□□□ -0.62
IRF3-208ENST00000594387 MAP1LC3AQ9H492 121 aa11.16□□□□□ -0.62
IRF3-208ENST00000594387 ABCA13Q86UQ4 5058 aa11.15□□□□□ -0.62
IRF3-208ENST00000594387 TMEM218A2RU14 115 aa11.15□□□□□ -0.62
IRF3-208ENST00000594387 CTDSP1Q9GZU7 261 aa11.15□□□□□ -0.62
IRF3-208ENST00000594387 SPANXA1Q9NS26 97 aa11.15□□□□□ -0.62
IRF3-208ENST00000594387 COX7A2LO14548 114 aa11.14□□□□□ -0.63
IRF3-208ENST00000594387 APOMO95445 188 aa11.14□□□□□ -0.63
IRF3-208ENST00000594387 SLPIP03973 132 aa11.14□□□□□ -0.63
IRF3-208ENST00000594387 IFITM2Q01629 132 aa11.14□□□□□ -0.63
IRF3-208ENST00000594387 RNASE13Q5GAN3 156 aaKnown RBP11.14□□□□□ -0.63
IRF3-208ENST00000594387 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.14□□□□□ -0.63
IRF3-208ENST00000594387 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
IRF3-208ENST00000594387 S100PP25815 95 aa11.13□□□□□ -0.63
IRF3-208ENST00000594387 IFI27P40305 119 aaPredicted RBP11.13□□□□□ -0.63
IRF3-208ENST00000594387 RPL39P62891 51 aaKnown RBP11.13□□□□□ -0.63
IRF3-208ENST00000594387 Q6ZUT4 128 aa11.13□□□□□ -0.63
IRF3-208ENST00000594387 COX6A2Q02221 97 aa11.12□□□□□ -0.63
IRF3-208ENST00000594387 SEC11CQ9BY50 192 aa11.12□□□□□ -0.63
IRF3-208ENST00000594387 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
IRF3-208ENST00000594387 RPL37AP61513 92 aaKnown RBP11.11□□□□□ -0.63
IRF3-208ENST00000594387 COMMD7Q86VX2 200 aa11.11□□□□□ -0.63
IRF3-208ENST00000594387 CARD19Q96LW7 228 aa11.11□□□□□ -0.63
IRF3-208ENST00000594387 TRAV9-1A0A075B6T8 112 aa11.1□□□□□ -0.63
IRF3-208ENST00000594387 MRPS36P82909 103 aaKnown RBP11.1□□□□□ -0.63
IRF3-208ENST00000594387 IGKV2-24A0A0C4DH68 120 aa11.09□□□□□ -0.63
IRF3-208ENST00000594387 G0S2P27469 103 aa11.09□□□□□ -0.63
IRF3-208ENST00000594387 SYCNQ0VAF6 134 aa11.09□□□□□ -0.63
IRF3-208ENST00000594387 CIRBPQ14011 172 aaKnown RBP11.09□□□□□ -0.63
IRF3-208ENST00000594387 ORMDL2Q53FV1 153 aa11.09□□□□□ -0.63
IRF3-208ENST00000594387 C5orf38Q86SI9 138 aa11.09□□□□□ -0.63
IRF3-208ENST00000594387 Q8N8P6 123 aa11.09□□□□□ -0.63
IRF3-208ENST00000594387 LINC00474Q9P2X8 69 aa11.09□□□□□ -0.63
IRF3-208ENST00000594387 IFITM10A6NMD0 228 aa11.08□□□□□ -0.64
IRF3-208ENST00000594387 J3QL48 77 aa11.08□□□□□ -0.64
IRF3-208ENST00000594387 K7EMI3 77 aa11.08□□□□□ -0.64
IRF3-208ENST00000594387 CHTF8P0CG12 524 aa11.08□□□□□ -0.64
IRF3-208ENST00000594387 ADCYAP1P18509 176 aa11.08□□□□□ -0.64
IRF3-208ENST00000594387 MAJINQ3KP22 176 aa11.08□□□□□ -0.64
IRF3-208ENST00000594387 LINC00526Q96FQ7 95 aa11.08□□□□□ -0.64
IRF3-208ENST00000594387 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
IRF3-208ENST00000594387 A0A087WYN8 130 aa11.07□□□□□ -0.64
IRF3-208ENST00000594387 PANO1I0J062 215 aa11.07□□□□□ -0.64
IRF3-208ENST00000594387 PRSS3P2Q8NHM4 247 aa11.07□□□□□ -0.64
IRF3-208ENST00000594387 SPACA4Q8TDM5 124 aa11.07□□□□□ -0.64
IRF3-208ENST00000594387 CAMK2N2Q96S95 79 aa11.07□□□□□ -0.64
IRF3-208ENST00000594387 CYSLTR1Q9Y271 337 aa11.07□□□□□ -0.64
IRF3-208ENST00000594387 PYGO1Q9Y3Y4 419 aa11.07□□□□□ -0.64
IRF3-208ENST00000594387 IGLV4-69A0A075B6H9 119 aa11.06□□□□□ -0.64
IRF3-208ENST00000594387 TGIF2-C20orf24A0A0A6YYL0 155 aa11.06□□□□□ -0.64
IRF3-208ENST00000594387 Q6ZN92 141 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms