RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 EIF5AL1Q6IS14 154 aaKnown RBP6.56□□□□□ -1.36
USE1-203ENST00000593597 SLC51BQ86UW2 128 aa6.56□□□□□ -1.36
USE1-203ENST00000593597 TCTE3Q8IZS6 198 aa6.56□□□□□ -1.36
USE1-203ENST00000593597 SMKR1H3BMG3 65 aa6.55□□□□□ -1.36
USE1-203ENST00000593597 SYCNQ0VAF6 134 aa6.55□□□□□ -1.36
USE1-203ENST00000593597 RNASE13Q5GAN3 156 aaKnown RBP6.55□□□□□ -1.36
USE1-203ENST00000593597 CD164L2Q6UWJ8 174 aa6.55□□□□□ -1.36
USE1-203ENST00000593597 IGLV4-69A0A075B6H9 119 aa6.54□□□□□ -1.36
USE1-203ENST00000593597 TRBV27A0A0K0K1C4 114 aa6.54□□□□□ -1.36
USE1-203ENST00000593597 RAB4AP20338 218 aa6.54□□□□□ -1.36
USE1-203ENST00000593597 CAMPP49913 170 aa6.54□□□□□ -1.36
USE1-203ENST00000593597 CT83Q5H943 113 aa6.54□□□□□ -1.36
USE1-203ENST00000593597 TEX261Q6UWH6 196 aa6.54□□□□□ -1.36
USE1-203ENST00000593597 Q6ZRP5 223 aa6.54□□□□□ -1.36
USE1-203ENST00000593597 AMN1Q8IY45 258 aa6.54□□□□□ -1.36
USE1-203ENST00000593597 ZNF664Q8N3J9 261 aa6.54□□□□□ -1.36
USE1-203ENST00000593597 MRAP2Q96G30 205 aa6.54□□□□□ -1.36
USE1-203ENST00000593597 TMEM101Q96IK0 257 aa6.54□□□□□ -1.36
USE1-203ENST00000593597 ST20Q9HBF5 79 aa6.54□□□□□ -1.36
USE1-203ENST00000593597 A8MWL6 223 aa6.53□□□□□ -1.36
USE1-203ENST00000593597 TMEM250H0YL14 139 aa6.53□□□□□ -1.36
USE1-203ENST00000593597 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.53□□□□□ -1.36
USE1-203ENST00000593597 TAGLN2P37802 199 aaKnown RBP6.53□□□□□ -1.36
USE1-203ENST00000593597 SMIM15Q7Z3B0 74 aa6.53□□□□□ -1.36
USE1-203ENST00000593597 LINC01551Q86U37 167 aa6.53□□□□□ -1.36
USE1-203ENST00000593597 KRTAP11-1Q8IUC1 163 aa6.53□□□□□ -1.36
USE1-203ENST00000593597 NRACQ8N912 160 aa6.53□□□□□ -1.36
USE1-203ENST00000593597 NUP35Q8NFH5 326 aa6.53□□□□□ -1.36
USE1-203ENST00000593597 FAM104AQ969W3 186 aa6.53□□□□□ -1.36
USE1-203ENST00000593597 BTF3L4Q96K17 158 aa6.53□□□□□ -1.36
USE1-203ENST00000593597 TMEM191AQ9H0A3 160 aa6.53□□□□□ -1.36
USE1-203ENST00000593597 LINC00474Q9P2X8 69 aa6.53□□□□□ -1.36
USE1-203ENST00000593597 UBE2D4Q9Y2X8 147 aa6.53□□□□□ -1.36
USE1-203ENST00000593597 C7orf77A4D0Y5 90 aa6.52□□□□□ -1.37
USE1-203ENST00000593597 HIGD1CA8MV81 97 aa6.52□□□□□ -1.37
USE1-203ENST00000593597 GAGE2BQ13066 116 aa6.52□□□□□ -1.37
USE1-203ENST00000593597 SS18Q15532 418 aa6.52□□□□□ -1.37
USE1-203ENST00000593597 REG3GQ6UW15 175 aa6.52□□□□□ -1.37
USE1-203ENST00000593597 ALKAL2Q6UX46 152 aa6.52□□□□□ -1.37
USE1-203ENST00000593597 Q6ZUT4 128 aa6.52□□□□□ -1.37
USE1-203ENST00000593597 TSKUQ8WUA8 353 aa6.52□□□□□ -1.37
USE1-203ENST00000593597 PSORS1C2Q9UIG4 136 aa6.52□□□□□ -1.37
USE1-203ENST00000593597 LOC107984640A0A0U1RRK4 108 aa6.51□□□□□ -1.37
USE1-203ENST00000593597 A0A1B0GUT8 65 aa6.51□□□□□ -1.37
USE1-203ENST00000593597 ZNF561-AS1K7EIQ3 104 aa6.51□□□□□ -1.37
USE1-203ENST00000593597 C9orf116Q5BN46 136 aaPredicted RBP6.51□□□□□ -1.37
USE1-203ENST00000593597 PHF5AQ7RTV0 110 aaKnown RBP6.51□□□□□ -1.37
USE1-203ENST00000593597 V9GYV3 84 aa6.51□□□□□ -1.37
USE1-203ENST00000593597 CEBPGP53567 150 aa6.5□□□□□ -1.37
USE1-203ENST00000593597 C5orf38Q86SI9 138 aa6.5□□□□□ -1.37
USE1-203ENST00000593597 OPRPNQ99935 248 aaPredicted RBP6.5□□□□□ -1.37
USE1-203ENST00000593597 MUC2Q02817 5179 aa6.5□□□□□ -1.37
USE1-203ENST00000593597 TRAV13-1A0A0B4J241 112 aa6.49□□□□□ -1.37
USE1-203ENST00000593597 COX7A2LO14548 114 aa6.49□□□□□ -1.37
USE1-203ENST00000593597 APOMO95445 188 aa6.49□□□□□ -1.37
USE1-203ENST00000593597 KRTAP7-1Q8IUC3 87 aa6.49□□□□□ -1.37
USE1-203ENST00000593597 CAMK2N2Q96S95 79 aa6.49□□□□□ -1.37
USE1-203ENST00000593597 SMIM7Q9BQ49 75 aa6.49□□□□□ -1.37
USE1-203ENST00000593597 OSTCQ9NRP0 149 aa6.49□□□□□ -1.37
USE1-203ENST00000593597 PKIGQ9Y2B9 76 aa6.49□□□□□ -1.37
USE1-203ENST00000593597 CSDC2Q9Y534 153 aaKnown RBP6.49□□□□□ -1.37
USE1-203ENST00000593597 FAM168BA1KXE4 195 aa6.48□□□□□ -1.37
USE1-203ENST00000593597 C1orf196B1AJZ1 125 aa6.48□□□□□ -1.37
USE1-203ENST00000593597 SRP19P09132 144 aaKnown RBP6.48□□□□□ -1.37
USE1-203ENST00000593597 SUMO2P61956 95 aaKnown RBP6.48□□□□□ -1.37
USE1-203ENST00000593597 SPAG11BQ08648 103 aa6.48□□□□□ -1.37
USE1-203ENST00000593597 C2orf48Q96LS8 159 aa6.48□□□□□ -1.37
USE1-203ENST00000593597 FAM210AQ96ND0 272 aa6.48□□□□□ -1.37
USE1-203ENST00000593597 VCYO14598 125 aa6.47□□□□□ -1.37
USE1-203ENST00000593597 MALP21145 153 aa6.47□□□□□ -1.37
USE1-203ENST00000593597 RPL39P62891 51 aaKnown RBP6.47□□□□□ -1.37
USE1-203ENST00000593597 BLOC1S1P78537 153 aa6.47□□□□□ -1.37
USE1-203ENST00000593597 RPL18AQ02543 176 aaKnown RBP6.47□□□□□ -1.37
USE1-203ENST00000593597 MRPL51Q4U2R6 128 aaKnown RBP6.47□□□□□ -1.37
USE1-203ENST00000593597 C10orf25Q5T742 122 aa6.47□□□□□ -1.37
USE1-203ENST00000593597 ISOC2Q96AB3 205 aa6.47□□□□□ -1.37
USE1-203ENST00000593597 BORCS7Q96B45 105 aa6.47□□□□□ -1.37
USE1-203ENST00000593597 C9JQL5 133 aa6.46□□□□□ -1.38
USE1-203ENST00000593597 FCER1GP30273 86 aa6.46□□□□□ -1.38
USE1-203ENST00000593597 C1orf137Q5JT78 98 aa6.46□□□□□ -1.38
USE1-203ENST00000593597 PRR26Q8N8Z3 221 aa6.46□□□□□ -1.38
USE1-203ENST00000593597 TIMM21Q9BVV7 248 aa6.46□□□□□ -1.38
USE1-203ENST00000593597 IGHV3OR16-9A0A0B4J2B5 98 aa6.45□□□□□ -1.38
USE1-203ENST00000593597 ZNF727A8MUV8 499 aa6.45□□□□□ -1.38
USE1-203ENST00000593597 MT-ND6P03923 174 aa6.45□□□□□ -1.38
USE1-203ENST00000593597 KRTAP1-4P0C5Y4 121 aa6.45□□□□□ -1.38
USE1-203ENST00000593597 RPL23P62829 140 aaKnown RBP6.45□□□□□ -1.38
USE1-203ENST00000593597 RNF151Q2KHN1 245 aa6.45□□□□□ -1.38
USE1-203ENST00000593597 FAM104BQ5XKR9 115 aa6.45□□□□□ -1.38
USE1-203ENST00000593597 IGLV7-43P04211 117 aa6.44□□□□□ -1.38
USE1-203ENST00000593597 RIGQ13278 110 aa6.44□□□□□ -1.38
USE1-203ENST00000593597 EIF5A2Q9GZV4 153 aaKnown RBP6.44□□□□□ -1.38
USE1-203ENST00000593597 MRPL35Q9NZE8 188 aaKnown RBP6.44□□□□□ -1.38
USE1-203ENST00000593597 C6orf48Q9UBA6 75 aa6.44□□□□□ -1.38
USE1-203ENST00000593597 TRBV24-1A0A075B6N3 115 aa6.43□□□□□ -1.38
USE1-203ENST00000593597 SMIM27A0A1W2PRY6 76 aa6.43□□□□□ -1.38
USE1-203ENST00000593597 RPL32P62910 135 aaKnown RBP6.43□□□□□ -1.38
USE1-203ENST00000593597 FAM74A3Q4VXF1 159 aa6.43□□□□□ -1.38
USE1-203ENST00000593597 UNQ6190/PRO20217Q6UXQ8 127 aa6.43□□□□□ -1.38
USE1-203ENST00000593597 OR10D4PQ8NGN7 298 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms