RNA–Protein interactions for RNA: ENST00000593061.5

ILF3-223, Transcript of interleukin enhancer binding factor 3, human

TSL 3

Gene ILF3, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-223	ENST00000593061	PPP1R17	O96001	155 aa		12.43	□□□□□ -0.42
ILF3-223	ENST00000593061	APCS	P02743	223 aa		12.43	□□□□□ -0.42
ILF3-223	ENST00000593061	AMMECR1L	Q6DCA0	310 aa		12.43	□□□□□ -0.42
ILF3-223	ENST00000593061	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	12.42	□□□□□ -0.42
ILF3-223	ENST00000593061	TRBV6-5	A0A0K0K1A5	114 aa		12.42	□□□□□ -0.42
ILF3-223	ENST00000593061	IGKV2-29	A2NJV5	120 aa	Predicted RBP	12.42	□□□□□ -0.42
ILF3-223	ENST00000593061	SMKR1	H3BMG3	65 aa		12.42	□□□□□ -0.42
ILF3-223	ENST00000593061	GAS8-AS1	O95177	125 aa		12.42	□□□□□ -0.42
ILF3-223	ENST00000593061	NCR2	O95944	276 aa		12.42	□□□□□ -0.42
ILF3-223	ENST00000593061	CKS2	P33552	79 aa		12.42	□□□□□ -0.42
ILF3-223	ENST00000593061	PPBP	P02775	128 aa		12.41	□□□□□ -0.42
ILF3-223	ENST00000593061	RPS10	P46783	165 aa	Known RBP	12.41	□□□□□ -0.42
ILF3-223	ENST00000593061	COX19	Q49B96	90 aa		12.41	□□□□□ -0.42
ILF3-223	ENST00000593061	RNASEK	Q6P5S7	137 aa	Known RBP	12.41	□□□□□ -0.42
ILF3-223	ENST00000593061	TMEM136	Q6ZRR5	245 aa		12.41	□□□□□ -0.42
ILF3-223	ENST00000593061	ST20	Q9HBF5	79 aa		12.41	□□□□□ -0.42
ILF3-223	ENST00000593061		J3QL48	77 aa		12.4	□□□□□ -0.42
ILF3-223	ENST00000593061	PMCH	P20382	165 aa		12.4	□□□□□ -0.42
ILF3-223	ENST00000593061	NRAC	Q8N912	160 aa		12.4	□□□□□ -0.42
ILF3-223	ENST00000593061	GAGE12H	A6NDE8	117 aa		12.39	□□□□□ -0.43
ILF3-223	ENST00000593061		D6R8Y8	96 aa		12.39	□□□□□ -0.43
ILF3-223	ENST00000593061	GNB1L	Q9BYB4	327 aa		12.39	□□□□□ -0.43
ILF3-223	ENST00000593061	AP5S1	Q9NUS5	200 aa		12.39	□□□□□ -0.43
ILF3-223	ENST00000593061	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	12.39	□□□□□ -0.43
ILF3-223	ENST00000593061	TRBV24-1	A0A075B6N3	115 aa		12.38	□□□□□ -0.43
ILF3-223	ENST00000593061	TGIF2-C20orf24	A0A0A6YYL0	155 aa		12.38	□□□□□ -0.43
ILF3-223	ENST00000593061		I3L3M4	83 aa		12.38	□□□□□ -0.43
ILF3-223	ENST00000593061	FGF6	P10767	208 aa		12.38	□□□□□ -0.43
ILF3-223	ENST00000593061	CNBP	P62633	177 aa	Known RBP	12.38	□□□□□ -0.43
ILF3-223	ENST00000593061	ORMDL3	Q8N138	153 aa		12.38	□□□□□ -0.43
ILF3-223	ENST00000593061	SMCO4	Q9NRQ5	59 aa		12.38	□□□□□ -0.43
ILF3-223	ENST00000593061	PKHD1L1	Q86WI1	4243 aa		12.38	□□□□□ -0.43
ILF3-223	ENST00000593061	LRP1	Q07954	4544 aa	Known RBP	12.37	□□□□□ -0.43
ILF3-223	ENST00000593061	PANO1	I0J062	215 aa		12.37	□□□□□ -0.43
ILF3-223	ENST00000593061		H7C423	109 aa		12.36	□□□□□ -0.43
ILF3-223	ENST00000593061	PHOX2A	O14813	284 aa		12.36	□□□□□ -0.43
ILF3-223	ENST00000593061	TNFRSF6B	O95407	300 aa		12.36	□□□□□ -0.43
ILF3-223	ENST00000593061	MT-ND6	P03923	174 aa		12.36	□□□□□ -0.43
ILF3-223	ENST00000593061	POLR2K	P53803	58 aa	Known RBP	12.36	□□□□□ -0.43
ILF3-223	ENST00000593061	KRTAP10-4	P60372	401 aa	Predicted RBP	12.36	□□□□□ -0.43
ILF3-223	ENST00000593061	SUMO2	P61956	95 aa	Known RBP	12.36	□□□□□ -0.43
ILF3-223	ENST00000593061	SDIM1	Q6ZPB5	146 aa		12.36	□□□□□ -0.43
ILF3-223	ENST00000593061	PRELID3A	Q96N28	172 aa		12.36	□□□□□ -0.43
ILF3-223	ENST00000593061	C20orf78	Q9BR46	151 aa		12.36	□□□□□ -0.43
ILF3-223	ENST00000593061	FAT3	Q8TDW7	4589 aa		12.36	□□□□□ -0.43
ILF3-223	ENST00000593061	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	12.35	□□□□□ -0.43
ILF3-223	ENST00000593061	SLPI	P03973	132 aa		12.35	□□□□□ -0.43
ILF3-223	ENST00000593061	CBLN2	Q8IUK8	224 aa		12.35	□□□□□ -0.43
ILF3-223	ENST00000593061	C15orf56	Q8N910	161 aa		12.35	□□□□□ -0.43
ILF3-223	ENST00000593061	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	12.35	□□□□□ -0.43
ILF3-223	ENST00000593061	YPEL4	Q96NS1	127 aa		12.35	□□□□□ -0.43
ILF3-223	ENST00000593061	TRBV27	A0A0K0K1C4	114 aa		12.34	□□□□□ -0.43
ILF3-223	ENST00000593061	VCY	O14598	125 aa		12.34	□□□□□ -0.43
ILF3-223	ENST00000593061	TSHB	P01222	138 aa		12.34	□□□□□ -0.43
ILF3-223	ENST00000593061	NPY	P01303	97 aa		12.34	□□□□□ -0.43
ILF3-223	ENST00000593061	RPL37A	P61513	92 aa	Known RBP	12.34	□□□□□ -0.43
ILF3-223	ENST00000593061	RPL32	P62910	135 aa	Known RBP	12.34	□□□□□ -0.43
ILF3-223	ENST00000593061	LAMTOR2	Q9Y2Q5	125 aa		12.34	□□□□□ -0.43
ILF3-223	ENST00000593061	IGHV3-64	A0A075B6Q5	118 aa		12.33	□□□□□ -0.44
ILF3-223	ENST00000593061	ZNF25	P17030	456 aa	Predicted RBP	12.33	□□□□□ -0.44
ILF3-223	ENST00000593061	HIGD2B	Q4VC39	106 aa		12.33	□□□□□ -0.44
ILF3-223	ENST00000593061	CFAP161	Q6P656	301 aa		12.33	□□□□□ -0.44
ILF3-223	ENST00000593061	TMEM101	Q96IK0	257 aa		12.33	□□□□□ -0.44
ILF3-223	ENST00000593061	MRPL18	Q9H0U6	180 aa	Known RBP	12.32	□□□□□ -0.44
ILF3-223	ENST00000593061	KRTAP29-1	A8MX34	341 aa	Predicted RBP	12.31	□□□□□ -0.44
ILF3-223	ENST00000593061	ESD	P10768	282 aa		12.31	□□□□□ -0.44
ILF3-223	ENST00000593061	OR5A1	Q8NGJ0	315 aa		12.31	□□□□□ -0.44
ILF3-223	ENST00000593061	DPH3	Q96FX2	82 aa		12.31	□□□□□ -0.44
ILF3-223	ENST00000593061	CHTF8	P0CG12	524 aa		12.3	□□□□□ -0.44
ILF3-223	ENST00000593061	FABP9	Q0Z7S8	132 aa		12.3	□□□□□ -0.44
ILF3-223	ENST00000593061	KIAA1644	Q3SXP7	199 aa		12.3	□□□□□ -0.44
ILF3-223	ENST00000593061	KIR2DL4	Q99706	377 aa		12.3	□□□□□ -0.44
ILF3-223	ENST00000593061	SMIM2	Q9BVW6	85 aa		12.3	□□□□□ -0.44
ILF3-223	ENST00000593061	TRAPPC1	Q9Y5R8	145 aa		12.3	□□□□□ -0.44
ILF3-223	ENST00000593061	PRSS47	A8MTI9	375 aa		12.29	□□□□□ -0.44
ILF3-223	ENST00000593061	XCL1	P47992	114 aa		12.29	□□□□□ -0.44
ILF3-223	ENST00000593061	MAP1LC3A	Q9H492	121 aa		12.29	□□□□□ -0.44
ILF3-223	ENST00000593061	TCAP	O15273	167 aa		12.28	□□□□□ -0.44
ILF3-223	ENST00000593061	FCER1G	P30273	86 aa		12.28	□□□□□ -0.44
ILF3-223	ENST00000593061	FOXI1	Q12951	378 aa		12.28	□□□□□ -0.44
ILF3-223	ENST00000593061	LINC00959	A0A1B0GUT2	108 aa		12.27	□□□□□ -0.45
ILF3-223	ENST00000593061	CCL25	O15444	150 aa		12.27	□□□□□ -0.45
ILF3-223	ENST00000593061	S100A1	P23297	94 aa		12.27	□□□□□ -0.45
ILF3-223	ENST00000593061	CIRBP	Q14011	172 aa	Known RBP	12.27	□□□□□ -0.45
ILF3-223	ENST00000593061	ATP6V1G1	O75348	118 aa		12.26	□□□□□ -0.45
ILF3-223	ENST00000593061	ALKBH7	Q9BT30	221 aa	Predicted RBP	12.26	□□□□□ -0.45
ILF3-223	ENST00000593061		A0A087WYN8	130 aa		12.25	□□□□□ -0.45
ILF3-223	ENST00000593061	GVQW2	A0A096LPI5	108 aa	Predicted RBP	12.25	□□□□□ -0.45
ILF3-223	ENST00000593061	LOC389332	A0A1B0GUA5	103 aa		12.25	□□□□□ -0.45
ILF3-223	ENST00000593061	COX6A2	Q02221	97 aa		12.25	□□□□□ -0.45
ILF3-223	ENST00000593061	MRPL52	Q86TS9	123 aa	Known RBP	12.25	□□□□□ -0.45
ILF3-223	ENST00000593061	SPACA4	Q8TDM5	124 aa		12.25	□□□□□ -0.45
ILF3-223	ENST00000593061	CDC42SE2	Q9NRR3	84 aa		12.25	□□□□□ -0.45
ILF3-223	ENST00000593061	SCO1	O75880	301 aa		12.24	□□□□□ -0.45
ILF3-223	ENST00000593061	HNRNPA3	P51991	378 aa	Known RBP	12.24	□□□□□ -0.45
ILF3-223	ENST00000593061	SS18	Q15532	418 aa		12.24	□□□□□ -0.45
ILF3-223	ENST00000593061	ZNF664	Q8N3J9	261 aa		12.24	□□□□□ -0.45
ILF3-223	ENST00000593061		Q8N8P6	123 aa		12.24	□□□□□ -0.45
ILF3-223	ENST00000593061	RAB5A	P20339	215 aa		12.23	□□□□□ -0.45
ILF3-223	ENST00000593061	PRSS3P2	Q8NHM4	247 aa		12.23	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms