RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 CCL19Q99731 98 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 PMCHL2Q9BQD1 86 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 KLK12Q9UKR0 248 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 ITPR2Q14571 2701 aa3.9□□□□□ -1.79
VMP1-215ENST00000592619 OTOGQ6ZRI0 2925 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 ZNF469Q96JG9 3925 aaPredicted RBP3.89□□□□□ -1.79
VMP1-215ENST00000592619 FLNBO75369 2602 aaKnown RBP3.89□□□□□ -1.79
VMP1-215ENST00000592619 A0A1W2PPM0 123 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 A6NN06 94 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 ZNF737O75373 536 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 IGKCP01834 107 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 IL5P05113 134 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 CIRBPQ14011 172 aaKnown RBP3.89□□□□□ -1.79
VMP1-215ENST00000592619 SS18Q15532 418 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 DEFB113Q30KQ7 82 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 LINC01590Q5TEZ4 76 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 Q5W150 140 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 SOSTDC1Q6X4U4 206 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 AMN1Q8IY45 258 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 UBALD1Q8TB05 177 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 LHFPL6Q9Y693 200 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 PKDREJQ9NTG1 2253 aa3.89□□□□□ -1.79
VMP1-215ENST00000592619 ANKRD17O75179 2603 aaKnown RBP3.89□□□□□ -1.79
VMP1-215ENST00000592619 A0A087WWC5 75 aa3.88□□□□□ -1.79
VMP1-215ENST00000592619 ATOX1O00244 68 aa3.88□□□□□ -1.79
VMP1-215ENST00000592619 TIMM17BO60830 172 aa3.88□□□□□ -1.79
VMP1-215ENST00000592619 TMEM256Q8N2U0 113 aa3.88□□□□□ -1.79
VMP1-215ENST00000592619 SPTSSAQ969W0 71 aa3.88□□□□□ -1.79
VMP1-215ENST00000592619 UPK3BQ9BT76 320 aa3.88□□□□□ -1.79
VMP1-215ENST00000592619 SMDT1Q9H4I9 107 aa3.88□□□□□ -1.79
VMP1-215ENST00000592619 NDUFB11Q9NX14 153 aa3.88□□□□□ -1.79
VMP1-215ENST00000592619 CELSR1Q9NYQ6 3014 aa3.87□□□□□ -1.79
VMP1-215ENST00000592619 TEX15Q9BXT5 2789 aa3.87□□□□□ -1.79
VMP1-215ENST00000592619 NACAE9PAV3 2078 aa3.87□□□□□ -1.79
VMP1-215ENST00000592619 TRAV1-1A0A0B4J248 108 aa3.87□□□□□ -1.79
VMP1-215ENST00000592619 Q8N8P6 123 aa3.87□□□□□ -1.79
VMP1-215ENST00000592619 CLDND2Q8NHS1 167 aa3.87□□□□□ -1.79
VMP1-215ENST00000592619 ABCA12Q86UK0 2595 aa3.87□□□□□ -1.79
VMP1-215ENST00000592619 DSCAMO60469 2012 aa3.87□□□□□ -1.79
VMP1-215ENST00000592619 TRAV14DV4A0A0A6YYC5 116 aa3.86□□□□□ -1.79
VMP1-215ENST00000592619 M0R135 149 aa3.86□□□□□ -1.79
VMP1-215ENST00000592619 CKS2P33552 79 aa3.86□□□□□ -1.79
VMP1-215ENST00000592619 RPS27P42677 84 aaKnown RBP3.86□□□□□ -1.79
VMP1-215ENST00000592619 EFNA4P52798 201 aa3.86□□□□□ -1.79
VMP1-215ENST00000592619 SNRPGP62308 76 aaKnown RBP3.86□□□□□ -1.79
VMP1-215ENST00000592619 CCL8P80075 99 aa3.86□□□□□ -1.79
VMP1-215ENST00000592619 ZNF660Q6AZW8 331 aaPredicted RBP3.86□□□□□ -1.79
VMP1-215ENST00000592619 ZNF322Q6U7Q0 402 aaPredicted RBP3.86□□□□□ -1.79
VMP1-215ENST00000592619 KLF14Q8TD94 323 aaPredicted RBP3.86□□□□□ -1.79
VMP1-215ENST00000592619 MGST2Q99735 147 aa3.86□□□□□ -1.79
VMP1-215ENST00000592619 NABP2Q9BQ15 211 aa3.86□□□□□ -1.79
VMP1-215ENST00000592619 TTTY13Q9BZ97 58 aa3.86□□□□□ -1.79
VMP1-215ENST00000592619 DYNLRB1Q9NP97 96 aa3.86□□□□□ -1.79
VMP1-215ENST00000592619 CACNA1DQ01668 2161 aa3.86□□□□□ -1.79
VMP1-215ENST00000592619 HEATR1Q9H583 2144 aaKnown RBP3.85□□□□□ -1.79
VMP1-215ENST00000592619 ALPK2Q86TB3 2170 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 C7orf77A4D0Y5 90 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 IQCF6A8MYZ5 107 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 IBA57-AS1B1ANH7 110 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 NPYP01303 97 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 IGHV1-69P01742 117 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 MPV17P39210 176 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 MIAQ16674 131 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 SPATA45Q537H7 98 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 C18orf32Q8TCD1 76 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 CLEC2BQ92478 149 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 AMELYQ99218 206 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 TANC2Q9HCD6 1990 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 PRRC2AP48634 2157 aaKnown RBP3.85□□□□□ -1.79
VMP1-215ENST00000592619 PRR14LQ5THK1 2151 aa3.85□□□□□ -1.79
VMP1-215ENST00000592619 hADV29S1A0JD25 119 aa3.84□□□□□ -1.79
VMP1-215ENST00000592619 HMSDA8MTL9 139 aa3.84□□□□□ -1.79
VMP1-215ENST00000592619 LYRM1O43325 122 aa3.84□□□□□ -1.79
VMP1-215ENST00000592619 IGHV1-46P01743 117 aa3.84□□□□□ -1.79
VMP1-215ENST00000592619 SLC25A16P16260 332 aa3.84□□□□□ -1.79
VMP1-215ENST00000592619 FAUP35544 74 aaKnown RBP3.84□□□□□ -1.79
VMP1-215ENST00000592619 PMCHL1Q16048 86 aa3.84□□□□□ -1.79
VMP1-215ENST00000592619 ETDBQ3ZM63 59 aa3.84□□□□□ -1.79
VMP1-215ENST00000592619 SMCR5Q8TEV8 140 aa3.84□□□□□ -1.79
VMP1-215ENST00000592619 CHCHD1Q96BP2 118 aaKnown RBP3.84□□□□□ -1.79
VMP1-215ENST00000592619 LINC00167Q96N53 147 aa3.84□□□□□ -1.79
VMP1-215ENST00000592619 LINC00467Q9BRT7 94 aa3.84□□□□□ -1.79
VMP1-215ENST00000592619 CYTL1Q9NRR1 136 aa3.84□□□□□ -1.79
VMP1-215ENST00000592619 NAV2Q8IVL1 2488 aa3.84□□□□□ -1.8
VMP1-215ENST00000592619 CADP27708 2225 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 ABCA4P78363 2273 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 POLQO75417 2590 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 MAST4O15021 2626 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 TMEM235A6NFC5 223 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 SYS1-DBNDD2H3BUS1 97 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 J3QLW9 94 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 J3QRE1 110 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 IGLV3-1P01715 115 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 PIPP12273 146 aaPredicted RBP3.83□□□□□ -1.8
VMP1-215ENST00000592619 NFYAP23511 347 aaPredicted RBP3.83□□□□□ -1.8
VMP1-215ENST00000592619 KRTDAPP60985 99 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 WFDC2Q14508 124 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 NMSQ5H8A3 153 aa3.83□□□□□ -1.8
VMP1-215ENST00000592619 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms