RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 PPP1R2P9O14990 202 aa9.77□□□□□ -0.85
ERCC1-213ENST00000592023 XCL1P47992 114 aa9.77□□□□□ -0.85
ERCC1-213ENST00000592023 MRPL52Q86TS9 123 aaKnown RBP9.77□□□□□ -0.85
ERCC1-213ENST00000592023 KIR2DL4Q99706 377 aa9.77□□□□□ -0.85
ERCC1-213ENST00000592023 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.76□□□□□ -0.85
ERCC1-213ENST00000592023 LINC00959A0A1B0GUT2 108 aa9.76□□□□□ -0.85
ERCC1-213ENST00000592023 A0A1B0GXF2 115 aa9.76□□□□□ -0.85
ERCC1-213ENST00000592023 PANO1I0J062 215 aa9.76□□□□□ -0.85
ERCC1-213ENST00000592023 CCL25O15444 150 aa9.76□□□□□ -0.85
ERCC1-213ENST00000592023 SLPIP03973 132 aa9.76□□□□□ -0.85
ERCC1-213ENST00000592023 S100A8P05109 93 aa9.76□□□□□ -0.85
ERCC1-213ENST00000592023 CKS2P33552 79 aa9.76□□□□□ -0.85
ERCC1-213ENST00000592023 FOXI1Q12951 378 aa9.76□□□□□ -0.85
ERCC1-213ENST00000592023 CFAP161Q6P656 301 aa9.76□□□□□ -0.85
ERCC1-213ENST00000592023 IGHV3-64A0A075B6Q5 118 aa9.75□□□□□ -0.85
ERCC1-213ENST00000592023 LINC00862A6NCI5 91 aa9.75□□□□□ -0.85
ERCC1-213ENST00000592023 D6R8Y8 96 aa9.75□□□□□ -0.85
ERCC1-213ENST00000592023 F8W036 122 aa9.75□□□□□ -0.85
ERCC1-213ENST00000592023 SDIM1Q6ZPB5 146 aa9.75□□□□□ -0.85
ERCC1-213ENST00000592023 CDC42SE2Q9NRR3 84 aa9.75□□□□□ -0.85
ERCC1-213ENST00000592023 TNFRSF6BO95407 300 aa9.74□□□□□ -0.85
ERCC1-213ENST00000592023 RNASE13Q5GAN3 156 aaKnown RBP9.74□□□□□ -0.85
ERCC1-213ENST00000592023 ZNF664Q8N3J9 261 aa9.74□□□□□ -0.85
ERCC1-213ENST00000592023 C20orf78Q9BR46 151 aa9.74□□□□□ -0.85
ERCC1-213ENST00000592023 UBE2D4Q9Y2X8 147 aa9.74□□□□□ -0.85
ERCC1-213ENST00000592023 GVQW2A0A096LPI5 108 aaPredicted RBP9.73□□□□□ -0.85
ERCC1-213ENST00000592023 NPYP01303 97 aa9.73□□□□□ -0.85
ERCC1-213ENST00000592023 CHTF8P0CG12 524 aa9.73□□□□□ -0.85
ERCC1-213ENST00000592023 SS18Q15532 418 aa9.73□□□□□ -0.85
ERCC1-213ENST00000592023 SMIM2Q9BVW6 85 aa9.73□□□□□ -0.85
ERCC1-213ENST00000592023 FLG2Q5D862 2391 aaPredicted RBP9.72□□□□□ -0.85
ERCC1-213ENST00000592023 TRBV24-1A0A075B6N3 115 aa9.72□□□□□ -0.85
ERCC1-213ENST00000592023 PNRC1Q12796 327 aaPredicted RBP9.72□□□□□ -0.85
ERCC1-213ENST00000592023 Q6ZUT4 128 aa9.72□□□□□ -0.85
ERCC1-213ENST00000592023 ATP5L2Q7Z4Y8 100 aa9.72□□□□□ -0.85
ERCC1-213ENST00000592023 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.86
ERCC1-213ENST00000592023 RPL32P62910 135 aaKnown RBP9.71□□□□□ -0.86
ERCC1-213ENST00000592023 SMAGPQ0VAQ4 97 aa9.71□□□□□ -0.86
ERCC1-213ENST00000592023 IGHV1-58A0A0C4DH39 117 aa9.7□□□□□ -0.86
ERCC1-213ENST00000592023 RPL37AP61513 92 aaKnown RBP9.7□□□□□ -0.86
ERCC1-213ENST00000592023 CIRBPQ14011 172 aaKnown RBP9.7□□□□□ -0.86
ERCC1-213ENST00000592023 CLLU1Q5K131 121 aa9.7□□□□□ -0.86
ERCC1-213ENST00000592023 CD164L2Q6UWJ8 174 aa9.7□□□□□ -0.86
ERCC1-213ENST00000592023 TMEM18Q96B42 140 aa9.7□□□□□ -0.86
ERCC1-213ENST00000592023 CSDC2Q9Y534 153 aaKnown RBP9.7□□□□□ -0.86
ERCC1-213ENST00000592023 TRAV13-1A0A0B4J241 112 aa9.69□□□□□ -0.86
ERCC1-213ENST00000592023 MYCBP2O75592 4640 aa9.69□□□□□ -0.86
ERCC1-213ENST00000592023 PPBPP02775 128 aa9.69□□□□□ -0.86
ERCC1-213ENST00000592023 MT-ND4LP03901 98 aa9.69□□□□□ -0.86
ERCC1-213ENST00000592023 RPL39P62891 51 aaKnown RBP9.69□□□□□ -0.86
ERCC1-213ENST00000592023 ORMDL3Q8N138 153 aa9.69□□□□□ -0.86
ERCC1-213ENST00000592023 SPACA4Q8TDM5 124 aa9.69□□□□□ -0.86
ERCC1-213ENST00000592023 ANAPC16Q96DE5 110 aa9.69□□□□□ -0.86
ERCC1-213ENST00000592023 LINC00526Q96FQ7 95 aa9.69□□□□□ -0.86
ERCC1-213ENST00000592023 SRRM2Q9UQ35 2752 aaKnown RBP9.68□□□□□ -0.86
ERCC1-213ENST00000592023 PHOX2AO14813 284 aa9.68□□□□□ -0.86
ERCC1-213ENST00000592023 TCAPO15273 167 aa9.68□□□□□ -0.86
ERCC1-213ENST00000592023 COX6A2Q02221 97 aa9.68□□□□□ -0.86
ERCC1-213ENST00000592023 DPH3Q96FX2 82 aa9.68□□□□□ -0.86
ERCC1-213ENST00000592023 PRELID3AQ96N28 172 aa9.68□□□□□ -0.86
ERCC1-213ENST00000592023 TIMM21Q9BVV7 248 aa9.68□□□□□ -0.86
ERCC1-213ENST00000592023 A0A087WYN8 130 aa9.67□□□□□ -0.86
ERCC1-213ENST00000592023 IGKV2-24A0A0C4DH68 120 aa9.67□□□□□ -0.86
ERCC1-213ENST00000592023 C1orf196B1AJZ1 125 aa9.67□□□□□ -0.86
ERCC1-213ENST00000592023 TMEM136Q6ZRR5 245 aa9.67□□□□□ -0.86
ERCC1-213ENST00000592023 PRSS3P2Q8NHM4 247 aa9.67□□□□□ -0.86
ERCC1-213ENST00000592023 J3QL48 77 aa9.66□□□□□ -0.86
ERCC1-213ENST00000592023 MALP21145 153 aa9.66□□□□□ -0.86
ERCC1-213ENST00000592023 CARD19Q96LW7 228 aa9.66□□□□□ -0.86
ERCC1-213ENST00000592023 ZNF561-AS1K7EIQ3 104 aa9.65□□□□□ -0.86
ERCC1-213ENST00000592023 COX7A2LO14548 114 aa9.65□□□□□ -0.86
ERCC1-213ENST00000592023 ADCYAP1P18509 176 aa9.65□□□□□ -0.86
ERCC1-213ENST00000592023 IFITM2Q01629 132 aa9.65□□□□□ -0.86
ERCC1-213ENST00000592023 SPANXA1Q9NS26 97 aa9.65□□□□□ -0.86
ERCC1-213ENST00000592023 A0A096LNI7 61 aa9.64□□□□□ -0.87
ERCC1-213ENST00000592023 RAB5AP20339 215 aa9.64□□□□□ -0.87
ERCC1-213ENST00000592023 MAJINQ3KP22 176 aa9.64□□□□□ -0.87
ERCC1-213ENST00000592023 C5orf38Q86SI9 138 aa9.64□□□□□ -0.87
ERCC1-213ENST00000592023 OPRPNQ99935 248 aaPredicted RBP9.64□□□□□ -0.87
ERCC1-213ENST00000592023 DMBT1Q9UGM3 2413 aaPredicted RBP9.64□□□□□ -0.87
ERCC1-213ENST00000592023 LOC389332A0A1B0GUA5 103 aa9.63□□□□□ -0.87
ERCC1-213ENST00000592023 HNRNPA3P51991 378 aaKnown RBP9.63□□□□□ -0.87
ERCC1-213ENST00000592023 FAM104AQ969W3 186 aa9.63□□□□□ -0.87
ERCC1-213ENST00000592023 MAP1LC3AQ9H492 121 aa9.63□□□□□ -0.87
ERCC1-213ENST00000592023 PLAC8Q9NZF1 115 aa9.63□□□□□ -0.87
ERCC1-213ENST00000592023 IGLV4-69A0A075B6H9 119 aa9.62□□□□□ -0.87
ERCC1-213ENST00000592023 IFITM10A6NMD0 228 aa9.62□□□□□ -0.87
ERCC1-213ENST00000592023 KRTAP29-1A8MX34 341 aaPredicted RBP9.62□□□□□ -0.87
ERCC1-213ENST00000592023 SYCNQ0VAF6 134 aa9.62□□□□□ -0.87
ERCC1-213ENST00000592023 UQCC3Q6UW78 93 aa9.62□□□□□ -0.87
ERCC1-213ENST00000592023 LAMTOR2Q9Y2Q5 125 aa9.62□□□□□ -0.87
ERCC1-213ENST00000592023 HERC1Q15751 4861 aa9.61□□□□□ -0.87
ERCC1-213ENST00000592023 IFI27P40305 119 aaPredicted RBP9.61□□□□□ -0.87
ERCC1-213ENST00000592023 MRPS36P82909 103 aaKnown RBP9.61□□□□□ -0.87
ERCC1-213ENST00000592023 STPG4Q8N801 248 aa9.61□□□□□ -0.87
ERCC1-213ENST00000592023 PKIGQ9Y2B9 76 aa9.61□□□□□ -0.87
ERCC1-213ENST00000592023 TMEM218A2RU14 115 aa9.6□□□□□ -0.87
ERCC1-213ENST00000592023 SPAG11BQ08648 103 aa9.6□□□□□ -0.87
ERCC1-213ENST00000592023 Q6ZRU5 148 aa9.6□□□□□ -0.87
ERCC1-213ENST00000592023 APOMO95445 188 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms