RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 OR5A1Q8NGJ0 315 aa9.11□□□□□ -0.95
CLIP3-205ENST00000592017 C20orf78Q9BR46 151 aa9.11□□□□□ -0.95
CLIP3-205ENST00000592017 GAGE12HA6NDE8 117 aa9.1□□□□□ -0.95
CLIP3-205ENST00000592017 Q5VSD8 79 aa9.1□□□□□ -0.95
CLIP3-205ENST00000592017 ORMDL3Q8N138 153 aa9.1□□□□□ -0.95
CLIP3-205ENST00000592017 SMIM2Q9BVW6 85 aa9.1□□□□□ -0.95
CLIP3-205ENST00000592017 SEC11CQ9BY50 192 aa9.1□□□□□ -0.95
CLIP3-205ENST00000592017 MYCBP2O75592 4640 aa9.09□□□□□ -0.95
CLIP3-205ENST00000592017 TRBV24-1A0A075B6N3 115 aa9.09□□□□□ -0.95
CLIP3-205ENST00000592017 PPBPP02775 128 aa9.09□□□□□ -0.95
CLIP3-205ENST00000592017 TMEM136Q6ZRR5 245 aa9.09□□□□□ -0.95
CLIP3-205ENST00000592017 PRELID3AQ96N28 172 aa9.09□□□□□ -0.95
CLIP3-205ENST00000592017 PRSS1P07477 247 aa9.08□□□□□ -0.96
CLIP3-205ENST00000592017 INAFM2P0DMQ5 153 aa9.08□□□□□ -0.96
CLIP3-205ENST00000592017 DGAT2L7PQ6IED9 249 aa9.08□□□□□ -0.96
CLIP3-205ENST00000592017 MRPL52Q86TS9 123 aaKnown RBP9.08□□□□□ -0.96
CLIP3-205ENST00000592017 CHCHD10Q8WYQ3 142 aaPredicted RBP9.08□□□□□ -0.96
CLIP3-205ENST00000592017 PHOX2AO14813 284 aa9.07□□□□□ -0.96
CLIP3-205ENST00000592017 TCAPO15273 167 aa9.07□□□□□ -0.96
CLIP3-205ENST00000592017 RPL32P62910 135 aaKnown RBP9.07□□□□□ -0.96
CLIP3-205ENST00000592017 CTDSP1Q9GZU7 261 aa9.07□□□□□ -0.96
CLIP3-205ENST00000592017 hDV102S1A0JD36 115 aa9.06□□□□□ -0.96
CLIP3-205ENST00000592017 XCL1P47992 114 aa9.06□□□□□ -0.96
CLIP3-205ENST00000592017 SMAGPQ0VAQ4 97 aa9.06□□□□□ -0.96
CLIP3-205ENST00000592017 RNASE13Q5GAN3 156 aaKnown RBP9.06□□□□□ -0.96
CLIP3-205ENST00000592017 Q6ZSA8 131 aa9.06□□□□□ -0.96
CLIP3-205ENST00000592017 ZNF664Q8N3J9 261 aa9.06□□□□□ -0.96
CLIP3-205ENST00000592017 TMEM18Q96B42 140 aa9.06□□□□□ -0.96
CLIP3-205ENST00000592017 IMMP2LQ96T52 175 aa9.06□□□□□ -0.96
CLIP3-205ENST00000592017 CDC42SE2Q9NRR3 84 aa9.06□□□□□ -0.96
CLIP3-205ENST00000592017 UBE2D4Q9Y2X8 147 aa9.06□□□□□ -0.96
CLIP3-205ENST00000592017 LOC389332A0A1B0GUA5 103 aa9.05□□□□□ -0.96
CLIP3-205ENST00000592017 LINC00959A0A1B0GUT2 108 aa9.05□□□□□ -0.96
CLIP3-205ENST00000592017 CCL25O15444 150 aa9.05□□□□□ -0.96
CLIP3-205ENST00000592017 S100PP25815 95 aa9.05□□□□□ -0.96
CLIP3-205ENST00000592017 RPL39P62891 51 aaKnown RBP9.05□□□□□ -0.96
CLIP3-205ENST00000592017 CLRN3Q8NCR9 226 aa9.05□□□□□ -0.96
CLIP3-205ENST00000592017 MAP1LC3AQ9H492 121 aa9.05□□□□□ -0.96
CLIP3-205ENST00000592017 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
CLIP3-205ENST00000592017 RAB5AP20339 215 aa9.04□□□□□ -0.96
CLIP3-205ENST00000592017 SS18Q15532 418 aa9.04□□□□□ -0.96
CLIP3-205ENST00000592017 Q6ZUT4 128 aa9.04□□□□□ -0.96
CLIP3-205ENST00000592017 AP5S1Q9NUS5 200 aa9.04□□□□□ -0.96
CLIP3-205ENST00000592017 FAM229AH3BQW9 127 aa9.03□□□□□ -0.96
CLIP3-205ENST00000592017 FOXI1Q12951 378 aa9.03□□□□□ -0.96
CLIP3-205ENST00000592017 HIGD2BQ4VC39 106 aa9.03□□□□□ -0.96
CLIP3-205ENST00000592017 CFAP161Q6P656 301 aa9.03□□□□□ -0.96
CLIP3-205ENST00000592017 RPS10P5Q9NQ39 176 aa9.03□□□□□ -0.96
CLIP3-205ENST00000592017 LAMTOR2Q9Y2Q5 125 aa9.03□□□□□ -0.96
CLIP3-205ENST00000592017 CARHSP1Q9Y2V2 147 aaKnown RBP9.03□□□□□ -0.96
CLIP3-205ENST00000592017 DMBT1Q9UGM3 2413 aaPredicted RBP9.03□□□□□ -0.96
CLIP3-205ENST00000592017 TRAV9-1A0A075B6T8 112 aa9.02□□□□□ -0.97
CLIP3-205ENST00000592017 TRAV13-1A0A0B4J241 112 aa9.02□□□□□ -0.97
CLIP3-205ENST00000592017 RHEBQ15382 184 aa9.02□□□□□ -0.97
CLIP3-205ENST00000592017 C10orf91Q5T1B1 145 aa9.02□□□□□ -0.97
CLIP3-205ENST00000592017 C15orf56Q8N910 161 aa9.02□□□□□ -0.97
CLIP3-205ENST00000592017 CSDC2Q9Y534 153 aaKnown RBP9.02□□□□□ -0.97
CLIP3-205ENST00000592017 KIAA1644Q3SXP7 199 aa9.01□□□□□ -0.97
CLIP3-205ENST00000592017 TIMM21Q9BVV7 248 aa9.01□□□□□ -0.97
CLIP3-205ENST00000592017 SCXQ7RTU7 201 aa9□□□□□ -0.97
CLIP3-205ENST00000592017 SPANXA1Q9NS26 97 aa9□□□□□ -0.97
CLIP3-205ENST00000592017 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.99□□□□□ -0.97
CLIP3-205ENST00000592017 APOC3P02656 99 aa8.99□□□□□ -0.97
CLIP3-205ENST00000592017 CNBPP62633 177 aaKnown RBP8.99□□□□□ -0.97
CLIP3-205ENST00000592017 NDUFA5Q16718 116 aa8.99□□□□□ -0.97
CLIP3-205ENST00000592017 CD164L2Q6UWJ8 174 aa8.99□□□□□ -0.97
CLIP3-205ENST00000592017 Q8N8P6 123 aa8.99□□□□□ -0.97
CLIP3-205ENST00000592017 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
CLIP3-205ENST00000592017 OPRPNQ99935 248 aaPredicted RBP8.99□□□□□ -0.97
CLIP3-205ENST00000592017 PRSS47A8MTI9 375 aa8.98□□□□□ -0.97
CLIP3-205ENST00000592017 C1orf196B1AJZ1 125 aa8.98□□□□□ -0.97
CLIP3-205ENST00000592017 IFI27P40305 119 aaPredicted RBP8.98□□□□□ -0.97
CLIP3-205ENST00000592017 GVQW2A0A096LPI5 108 aaPredicted RBP8.97□□□□□ -0.97
CLIP3-205ENST00000592017 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
CLIP3-205ENST00000592017 IFITM10A6NMD0 228 aa8.97□□□□□ -0.97
CLIP3-205ENST00000592017 SLPIP03973 132 aa8.97□□□□□ -0.97
CLIP3-205ENST00000592017 MALP21145 153 aa8.97□□□□□ -0.97
CLIP3-205ENST00000592017 LINC00528Q8N1L1 170 aa8.97□□□□□ -0.97
CLIP3-205ENST00000592017 CHAC1Q9BUX1 264 aa8.97□□□□□ -0.97
CLIP3-205ENST00000592017 IGHV3-64A0A075B6Q5 118 aa8.96□□□□□ -0.98
CLIP3-205ENST00000592017 COX7A2LO14548 114 aa8.96□□□□□ -0.98
CLIP3-205ENST00000592017 MRPS36P82909 103 aaKnown RBP8.96□□□□□ -0.98
CLIP3-205ENST00000592017 LINC00526Q96FQ7 95 aa8.96□□□□□ -0.98
CLIP3-205ENST00000592017 GNB1LQ9BYB4 327 aa8.96□□□□□ -0.98
CLIP3-205ENST00000592017 NXT2Q9NPJ8 142 aaKnown RBP8.96□□□□□ -0.98
CLIP3-205ENST00000592017 SNAPINO95295 136 aa8.95□□□□□ -0.98
CLIP3-205ENST00000592017 COX19Q49B96 90 aa8.95□□□□□ -0.98
CLIP3-205ENST00000592017 ORMDL2Q53FV1 153 aa8.95□□□□□ -0.98
CLIP3-205ENST00000592017 C2orf66Q6UXQ4 117 aa8.95□□□□□ -0.98
CLIP3-205ENST00000592017 C5orf38Q86SI9 138 aa8.95□□□□□ -0.98
CLIP3-205ENST00000592017 SVBPQ8N300 66 aa8.95□□□□□ -0.98
CLIP3-205ENST00000592017 CIRBP-AS1Q8TBR5 109 aa8.95□□□□□ -0.98
CLIP3-205ENST00000592017 FAM104AQ969W3 186 aa8.95□□□□□ -0.98
CLIP3-205ENST00000592017 MRPL18Q9H0U6 180 aaKnown RBP8.95□□□□□ -0.98
CLIP3-205ENST00000592017 CYSLTR1Q9Y271 337 aa8.95□□□□□ -0.98
CLIP3-205ENST00000592017 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.95□□□□□ -0.98
CLIP3-205ENST00000592017 IGLV4-3A0A075B6K6 122 aa8.94□□□□□ -0.98
CLIP3-205ENST00000592017 TGIF2-C20orf24A0A0A6YYL0 155 aa8.94□□□□□ -0.98
CLIP3-205ENST00000592017 MT-ND6P03923 174 aa8.94□□□□□ -0.98
CLIP3-205ENST00000592017 FABP9Q0Z7S8 132 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms