RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 TCAPO15273 167 aa7.53□□□□□ -1.2
VMP1-211ENST00000591315 CDK2AP2O75956 126 aa7.53□□□□□ -1.2
VMP1-211ENST00000591315 FCER1GP30273 86 aa7.53□□□□□ -1.2
VMP1-211ENST00000591315 XGP55808 180 aa7.53□□□□□ -1.2
VMP1-211ENST00000591315 TMEM136Q6ZRR5 245 aa7.53□□□□□ -1.2
VMP1-211ENST00000591315 BTF3L4Q96K17 158 aa7.53□□□□□ -1.2
VMP1-211ENST00000591315 PRELID3AQ96N28 172 aa7.53□□□□□ -1.2
VMP1-211ENST00000591315 C20orf78Q9BR46 151 aa7.53□□□□□ -1.2
VMP1-211ENST00000591315 FAM30AQ9NZY2 134 aa7.53□□□□□ -1.2
VMP1-211ENST00000591315 CARHSP1Q9Y2V2 147 aaKnown RBP7.53□□□□□ -1.2
VMP1-211ENST00000591315 PCLOQ9Y6V0 5065 aa7.52□□□□□ -1.2
VMP1-211ENST00000591315 GAGE12HA6NDE8 117 aa7.52□□□□□ -1.21
VMP1-211ENST00000591315 PPP1R17O96001 155 aa7.52□□□□□ -1.21
VMP1-211ENST00000591315 PRSS1P07477 247 aa7.52□□□□□ -1.21
VMP1-211ENST00000591315 RPL39P62891 51 aaKnown RBP7.52□□□□□ -1.21
VMP1-211ENST00000591315 RNASE13Q5GAN3 156 aaKnown RBP7.52□□□□□ -1.21
VMP1-211ENST00000591315 ORMDL3Q8N138 153 aa7.52□□□□□ -1.21
VMP1-211ENST00000591315 CLRN3Q8NCR9 226 aa7.52□□□□□ -1.21
VMP1-211ENST00000591315 SMIM2Q9BVW6 85 aa7.52□□□□□ -1.21
VMP1-211ENST00000591315 CTDSP1Q9GZU7 261 aa7.52□□□□□ -1.21
VMP1-211ENST00000591315 LOC389332A0A1B0GUA5 103 aa7.51□□□□□ -1.21
VMP1-211ENST00000591315 H7C423 109 aa7.51□□□□□ -1.21
VMP1-211ENST00000591315 RPL32P62910 135 aaKnown RBP7.51□□□□□ -1.21
VMP1-211ENST00000591315 KIAA1644Q3SXP7 199 aa7.51□□□□□ -1.21
VMP1-211ENST00000591315 MRPL52Q86TS9 123 aaKnown RBP7.51□□□□□ -1.21
VMP1-211ENST00000591315 OR5A1Q8NGJ0 315 aa7.51□□□□□ -1.21
VMP1-211ENST00000591315 IMMP2LQ96T52 175 aa7.51□□□□□ -1.21
VMP1-211ENST00000591315 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
VMP1-211ENST00000591315 TRAV8-4A0A0B4J246 113 aa7.5□□□□□ -1.21
VMP1-211ENST00000591315 PPBPP02775 128 aa7.5□□□□□ -1.21
VMP1-211ENST00000591315 CHCHD10Q8WYQ3 142 aaPredicted RBP7.5□□□□□ -1.21
VMP1-211ENST00000591315 FAM104AQ969W3 186 aa7.5□□□□□ -1.21
VMP1-211ENST00000591315 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
VMP1-211ENST00000591315 OPRPNQ99935 248 aaPredicted RBP7.5□□□□□ -1.21
VMP1-211ENST00000591315 RPS10P5Q9NQ39 176 aa7.5□□□□□ -1.21
VMP1-211ENST00000591315 UBE2D4Q9Y2X8 147 aa7.5□□□□□ -1.21
VMP1-211ENST00000591315 LINC00959A0A1B0GUT2 108 aa7.49□□□□□ -1.21
VMP1-211ENST00000591315 PHOX2AO14813 284 aa7.49□□□□□ -1.21
VMP1-211ENST00000591315 ZNF25P17030 456 aaPredicted RBP7.49□□□□□ -1.21
VMP1-211ENST00000591315 Q6ZUT4 128 aa7.49□□□□□ -1.21
VMP1-211ENST00000591315 ZNF664Q8N3J9 261 aa7.49□□□□□ -1.21
VMP1-211ENST00000591315 TMEM101Q96IK0 257 aa7.49□□□□□ -1.21
VMP1-211ENST00000591315 VPS13BQ7Z7G8 4022 aa7.48□□□□□ -1.21
VMP1-211ENST00000591315 APOC3P02656 99 aa7.48□□□□□ -1.21
VMP1-211ENST00000591315 SLPIP03973 132 aa7.48□□□□□ -1.21
VMP1-211ENST00000591315 XCL1P47992 114 aa7.48□□□□□ -1.21
VMP1-211ENST00000591315 CCL25O15444 150 aa7.47□□□□□ -1.21
VMP1-211ENST00000591315 SMR3BP02814 79 aaPredicted RBP7.47□□□□□ -1.21
VMP1-211ENST00000591315 FOXI1Q12951 378 aa7.47□□□□□ -1.21
VMP1-211ENST00000591315 DGAT2L7PQ6IED9 249 aa7.47□□□□□ -1.21
VMP1-211ENST00000591315 C15orf56Q8N910 161 aa7.47□□□□□ -1.21
VMP1-211ENST00000591315 TRAV9-1A0A075B6T8 112 aa7.46□□□□□ -1.22
VMP1-211ENST00000591315 TGIF2-C20orf24A0A0A6YYL0 155 aa7.46□□□□□ -1.22
VMP1-211ENST00000591315 hDV102S1A0JD36 115 aa7.46□□□□□ -1.22
VMP1-211ENST00000591315 PRSS47A8MTI9 375 aa7.46□□□□□ -1.22
VMP1-211ENST00000591315 RHEBQ15382 184 aa7.46□□□□□ -1.22
VMP1-211ENST00000591315 HIGD2BQ4VC39 106 aa7.46□□□□□ -1.22
VMP1-211ENST00000591315 C14orf177Q52M58 125 aa7.46□□□□□ -1.22
VMP1-211ENST00000591315 SLC7A5P1Q8MH63 180 aa7.46□□□□□ -1.22
VMP1-211ENST00000591315 MAP1LC3AQ9H492 121 aa7.46□□□□□ -1.22
VMP1-211ENST00000591315 SRRM2Q9UQ35 2752 aaKnown RBP7.45□□□□□ -1.22
VMP1-211ENST00000591315 TRAV13-1A0A0B4J241 112 aa7.45□□□□□ -1.22
VMP1-211ENST00000591315 S100PP25815 95 aa7.45□□□□□ -1.22
VMP1-211ENST00000591315 IFI27P40305 119 aaPredicted RBP7.45□□□□□ -1.22
VMP1-211ENST00000591315 Q8N8P6 123 aa7.45□□□□□ -1.22
VMP1-211ENST00000591315 LINC00526Q96FQ7 95 aa7.45□□□□□ -1.22
VMP1-211ENST00000591315 TIMM21Q9BVV7 248 aa7.45□□□□□ -1.22
VMP1-211ENST00000591315 CSDC2Q9Y534 153 aaKnown RBP7.45□□□□□ -1.22
VMP1-211ENST00000591315 RAB5AP20339 215 aa7.44□□□□□ -1.22
VMP1-211ENST00000591315 ZC2HC1BQ5TFG8 222 aa7.44□□□□□ -1.22
VMP1-211ENST00000591315 Q6ZSA8 131 aa7.44□□□□□ -1.22
VMP1-211ENST00000591315 Q8N1X5 172 aa7.44□□□□□ -1.22
VMP1-211ENST00000591315 LAMTOR2Q9Y2Q5 125 aa7.44□□□□□ -1.22
VMP1-211ENST00000591315 PANO1I0J062 215 aa7.43□□□□□ -1.22
VMP1-211ENST00000591315 SS18Q15532 418 aa7.43□□□□□ -1.22
VMP1-211ENST00000591315 GNB1LQ9BYB4 327 aa7.43□□□□□ -1.22
VMP1-211ENST00000591315 MRPL18Q9H0U6 180 aaKnown RBP7.43□□□□□ -1.22
VMP1-211ENST00000591315 FABP9Q0Z7S8 132 aa7.42□□□□□ -1.22
VMP1-211ENST00000591315 CD164L2Q6UWJ8 174 aa7.42□□□□□ -1.22
VMP1-211ENST00000591315 SVBPQ8N300 66 aa7.42□□□□□ -1.22
VMP1-211ENST00000591315 C9orf163Q8N9P6 203 aa7.42□□□□□ -1.22
VMP1-211ENST00000591315 TMEM18Q96B42 140 aa7.42□□□□□ -1.22
VMP1-211ENST00000591315 ALKBH7Q9BT30 221 aaPredicted RBP7.42□□□□□ -1.22
VMP1-211ENST00000591315 SPANXA1Q9NS26 97 aa7.42□□□□□ -1.22
VMP1-211ENST00000591315 IGLV4-3A0A075B6K6 122 aa7.41□□□□□ -1.22
VMP1-211ENST00000591315 SNAPINO95295 136 aa7.41□□□□□ -1.22
VMP1-211ENST00000591315 CNBPP62633 177 aaKnown RBP7.41□□□□□ -1.22
VMP1-211ENST00000591315 MRPS36P82909 103 aaKnown RBP7.41□□□□□ -1.22
VMP1-211ENST00000591315 SCXQ7RTU7 201 aa7.41□□□□□ -1.22
VMP1-211ENST00000591315 C5orf38Q86SI9 138 aa7.41□□□□□ -1.22
VMP1-211ENST00000591315 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.41□□□□□ -1.22
VMP1-211ENST00000591315 FLG2Q5D862 2391 aaPredicted RBP7.41□□□□□ -1.22
VMP1-211ENST00000591315 GVQW2A0A096LPI5 108 aaPredicted RBP7.4□□□□□ -1.22
VMP1-211ENST00000591315 C1orf196B1AJZ1 125 aa7.4□□□□□ -1.22
VMP1-211ENST00000591315 SMAGPQ0VAQ4 97 aa7.4□□□□□ -1.22
VMP1-211ENST00000591315 NDUFA5Q16718 116 aa7.4□□□□□ -1.22
VMP1-211ENST00000591315 CFAP161Q6P656 301 aa7.4□□□□□ -1.22
VMP1-211ENST00000591315 C2orf66Q6UXQ4 117 aa7.4□□□□□ -1.22
VMP1-211ENST00000591315 SDIM1Q6ZPB5 146 aa7.4□□□□□ -1.22
VMP1-211ENST00000591315 YPEL4Q96NS1 127 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms