RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 LINC00959A0A1B0GUT2 108 aa8.78□□□□□ -1
NEDD4L-228ENST00000590248 VCYO14598 125 aa8.78□□□□□ -1
NEDD4L-228ENST00000590248 ZNF25P17030 456 aaPredicted RBP8.78□□□□□ -1
NEDD4L-228ENST00000590248 FOXI1Q12951 378 aa8.78□□□□□ -1
NEDD4L-228ENST00000590248 FAM104BQ5XKR9 115 aa8.78□□□□□ -1
NEDD4L-228ENST00000590248 MRPL54Q6P161 138 aaKnown RBP8.78□□□□□ -1
NEDD4L-228ENST00000590248 SMDT1Q9H4I9 107 aa8.78□□□□□ -1
NEDD4L-228ENST00000590248 CDC42SE2Q9NRR3 84 aa8.78□□□□□ -1
NEDD4L-228ENST00000590248 IGHV3-64A0A075B6Q5 118 aa8.77□□□□□ -1.01
NEDD4L-228ENST00000590248 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.77□□□□□ -1.01
NEDD4L-228ENST00000590248 C7orf77A4D0Y5 90 aa8.77□□□□□ -1.01
NEDD4L-228ENST00000590248 J3QL48 77 aa8.77□□□□□ -1.01
NEDD4L-228ENST00000590248 CCL25O15444 150 aa8.77□□□□□ -1.01
NEDD4L-228ENST00000590248 SUMO2P61956 95 aaKnown RBP8.77□□□□□ -1.01
NEDD4L-228ENST00000590248 CFAP161Q6P656 301 aa8.77□□□□□ -1.01
NEDD4L-228ENST00000590248 LINC00526Q96FQ7 95 aa8.77□□□□□ -1.01
NEDD4L-228ENST00000590248 DPH3Q96FX2 82 aa8.77□□□□□ -1.01
NEDD4L-228ENST00000590248 FAT3Q8TDW7 4589 aa8.77□□□□□ -1.01
NEDD4L-228ENST00000590248 PKHD1L1Q86WI1 4243 aa8.77□□□□□ -1.01
NEDD4L-228ENST00000590248 FCER1GP30273 86 aa8.76□□□□□ -1.01
NEDD4L-228ENST00000590248 COX6A2Q02221 97 aa8.76□□□□□ -1.01
NEDD4L-228ENST00000590248 RNASE13Q5GAN3 156 aaKnown RBP8.76□□□□□ -1.01
NEDD4L-228ENST00000590248 ZNF664Q8N3J9 261 aa8.76□□□□□ -1.01
NEDD4L-228ENST00000590248 CKS2P33552 79 aa8.75□□□□□ -1.01
NEDD4L-228ENST00000590248 RPL37AP61513 92 aaKnown RBP8.75□□□□□ -1.01
NEDD4L-228ENST00000590248 MRPL52Q86TS9 123 aaKnown RBP8.75□□□□□ -1.01
NEDD4L-228ENST00000590248 A0A087WYN8 130 aa8.74□□□□□ -1.01
NEDD4L-228ENST00000590248 PPP1R17O96001 155 aa8.74□□□□□ -1.01
NEDD4L-228ENST00000590248 HNRNPA3P51991 378 aaKnown RBP8.74□□□□□ -1.01
NEDD4L-228ENST00000590248 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
NEDD4L-228ENST00000590248 SS18Q15532 418 aa8.74□□□□□ -1.01
NEDD4L-228ENST00000590248 PRSS3P2Q8NHM4 247 aa8.74□□□□□ -1.01
NEDD4L-228ENST00000590248 UBE2D4Q9Y2X8 147 aa8.74□□□□□ -1.01
NEDD4L-228ENST00000590248 GVQW2A0A096LPI5 108 aaPredicted RBP8.73□□□□□ -1.01
NEDD4L-228ENST00000590248 D6R8Y8 96 aa8.73□□□□□ -1.01
NEDD4L-228ENST00000590248 TNFRSF6BO95407 300 aa8.73□□□□□ -1.01
NEDD4L-228ENST00000590248 KIR2DL4Q99706 377 aa8.73□□□□□ -1.01
NEDD4L-228ENST00000590248 TRBV24-1A0A075B6N3 115 aa8.72□□□□□ -1.01
NEDD4L-228ENST00000590248 IGKV2-24A0A0C4DH68 120 aa8.72□□□□□ -1.01
NEDD4L-228ENST00000590248 A0A1B0GW15 77 aa8.72□□□□□ -1.01
NEDD4L-228ENST00000590248 A0A1B0GXF2 115 aa8.72□□□□□ -1.01
NEDD4L-228ENST00000590248 LINC00862A6NCI5 91 aa8.72□□□□□ -1.01
NEDD4L-228ENST00000590248 KRTAP29-1A8MX34 341 aaPredicted RBP8.72□□□□□ -1.01
NEDD4L-228ENST00000590248 PPP1R2P9O14990 202 aa8.72□□□□□ -1.01
NEDD4L-228ENST00000590248 HBBP68871 147 aa8.72□□□□□ -1.01
NEDD4L-228ENST00000590248 SPACA4Q8TDM5 124 aa8.72□□□□□ -1.01
NEDD4L-228ENST00000590248 TCAPO15273 167 aa8.71□□□□□ -1.02
NEDD4L-228ENST00000590248 NPYP01303 97 aa8.71□□□□□ -1.02
NEDD4L-228ENST00000590248 RPL39P62891 51 aaKnown RBP8.71□□□□□ -1.02
NEDD4L-228ENST00000590248 CD164L2Q6UWJ8 174 aa8.71□□□□□ -1.02
NEDD4L-228ENST00000590248 Q6ZUT4 128 aa8.71□□□□□ -1.02
NEDD4L-228ENST00000590248 C20orf78Q9BR46 151 aa8.71□□□□□ -1.02
NEDD4L-228ENST00000590248 TRAV13-1A0A0B4J241 112 aa8.7□□□□□ -1.02
NEDD4L-228ENST00000590248 IGHV1-58A0A0C4DH39 117 aa8.7□□□□□ -1.02
NEDD4L-228ENST00000590248 F8W036 122 aa8.7□□□□□ -1.02
NEDD4L-228ENST00000590248 MAJINQ3KP22 176 aa8.7□□□□□ -1.02
NEDD4L-228ENST00000590248 OPRPNQ99935 248 aaPredicted RBP8.7□□□□□ -1.02
NEDD4L-228ENST00000590248 CSDC2Q9Y534 153 aaKnown RBP8.7□□□□□ -1.02
NEDD4L-228ENST00000590248 S100A8P05109 93 aa8.69□□□□□ -1.02
NEDD4L-228ENST00000590248 RAB14P61106 215 aa8.69□□□□□ -1.02
NEDD4L-228ENST00000590248 SMIM2Q9BVW6 85 aa8.69□□□□□ -1.02
NEDD4L-228ENST00000590248 A0A096LNI7 61 aa8.68□□□□□ -1.02
NEDD4L-228ENST00000590248 C1orf196B1AJZ1 125 aa8.68□□□□□ -1.02
NEDD4L-228ENST00000590248 C5orf38Q86SI9 138 aa8.68□□□□□ -1.02
NEDD4L-228ENST00000590248 FAM104AQ969W3 186 aa8.68□□□□□ -1.02
NEDD4L-228ENST00000590248 PLAC8Q9NZF1 115 aa8.68□□□□□ -1.02
NEDD4L-228ENST00000590248 ZNF561-AS1K7EIQ3 104 aa8.67□□□□□ -1.02
NEDD4L-228ENST00000590248 MALP21145 153 aa8.67□□□□□ -1.02
NEDD4L-228ENST00000590248 RPL32P62910 135 aaKnown RBP8.67□□□□□ -1.02
NEDD4L-228ENST00000590248 TMEM136Q6ZRR5 245 aa8.67□□□□□ -1.02
NEDD4L-228ENST00000590248 STPG4Q8N801 248 aa8.67□□□□□ -1.02
NEDD4L-228ENST00000590248 TMEM18Q96B42 140 aa8.67□□□□□ -1.02
NEDD4L-228ENST00000590248 TIMM21Q9BVV7 248 aa8.67□□□□□ -1.02
NEDD4L-228ENST00000590248 IGLV4-69A0A075B6H9 119 aa8.66□□□□□ -1.02
NEDD4L-228ENST00000590248 LOC389332A0A1B0GUA5 103 aa8.66□□□□□ -1.02
NEDD4L-228ENST00000590248 COX7A2LO14548 114 aa8.66□□□□□ -1.02
NEDD4L-228ENST00000590248 PHOX2AO14813 284 aa8.66□□□□□ -1.02
NEDD4L-228ENST00000590248 SYCNQ0VAF6 134 aa8.66□□□□□ -1.02
NEDD4L-228ENST00000590248 SMAGPQ0VAQ4 97 aa8.66□□□□□ -1.02
NEDD4L-228ENST00000590248 ATP5L2Q7Z4Y8 100 aa8.66□□□□□ -1.02
NEDD4L-228ENST00000590248 ORMDL3Q8N138 153 aa8.66□□□□□ -1.02
NEDD4L-228ENST00000590248 CARD19Q96LW7 228 aa8.66□□□□□ -1.02
NEDD4L-228ENST00000590248 PRELID3AQ96N28 172 aa8.66□□□□□ -1.02
NEDD4L-228ENST00000590248 PPBPP02775 128 aa8.65□□□□□ -1.02
NEDD4L-228ENST00000590248 PNRC1Q12796 327 aaPredicted RBP8.65□□□□□ -1.02
NEDD4L-228ENST00000590248 OXTP01178 125 aa8.64□□□□□ -1.03
NEDD4L-228ENST00000590248 MT-ND4LP03901 98 aa8.64□□□□□ -1.03
NEDD4L-228ENST00000590248 CLLU1Q5K131 121 aa8.64□□□□□ -1.03
NEDD4L-228ENST00000590248 Q6ZRU5 148 aa8.64□□□□□ -1.03
NEDD4L-228ENST00000590248 ANAPC16Q96DE5 110 aa8.64□□□□□ -1.03
NEDD4L-228ENST00000590248 ADCYAP1P18509 176 aa8.62□□□□□ -1.03
NEDD4L-228ENST00000590248 RAB5AP20339 215 aa8.62□□□□□ -1.03
NEDD4L-228ENST00000590248 IFITM2Q01629 132 aa8.62□□□□□ -1.03
NEDD4L-228ENST00000590248 GAGE2BQ13066 116 aa8.62□□□□□ -1.03
NEDD4L-228ENST00000590248 CAMK2N2Q96S95 79 aa8.62□□□□□ -1.03
NEDD4L-228ENST00000590248 SPANXA1Q9NS26 97 aa8.62□□□□□ -1.03
NEDD4L-228ENST00000590248 A0A0J9YXV3 536 aa8.61□□□□□ -1.03
NEDD4L-228ENST00000590248 C7orf33Q8WU49 177 aa8.61□□□□□ -1.03
NEDD4L-228ENST00000590248 IGHV3OR16-9A0A0B4J2B5 98 aa8.6□□□□□ -1.03
NEDD4L-228ENST00000590248 IFITM10A6NMD0 228 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms