RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 DMBT1Q9UGM3 2413 aaPredicted RBP13.19□□□□□ -0.3
CIRBP-226ENST00000590171 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.18□□□□□ -0.3
CIRBP-226ENST00000590171 C7orf77A4D0Y5 90 aa13.18□□□□□ -0.3
CIRBP-226ENST00000590171 VCYO14598 125 aa13.18□□□□□ -0.3
CIRBP-226ENST00000590171 SUMO2P61956 95 aaKnown RBP13.18□□□□□ -0.3
CIRBP-226ENST00000590171 FOXI1Q12951 378 aa13.18□□□□□ -0.3
CIRBP-226ENST00000590171 CFAP161Q6P656 301 aa13.18□□□□□ -0.3
CIRBP-226ENST00000590171 IGHV3-64A0A075B6Q5 118 aa13.17□□□□□ -0.3
CIRBP-226ENST00000590171 PPP1R17O96001 155 aa13.17□□□□□ -0.3
CIRBP-226ENST00000590171 HIGD2BQ4VC39 106 aa13.17□□□□□ -0.3
CIRBP-226ENST00000590171 CDC42SE2Q9NRR3 84 aa13.17□□□□□ -0.3
CIRBP-226ENST00000590171 LINC00959A0A1B0GUT2 108 aa13.16□□□□□ -0.3
CIRBP-226ENST00000590171 FCER1GP30273 86 aa13.16□□□□□ -0.3
CIRBP-226ENST00000590171 XCL1P47992 114 aa13.16□□□□□ -0.3
CIRBP-226ENST00000590171 CIRBPQ14011 172 aaKnown RBP13.16□□□□□ -0.3
CIRBP-226ENST00000590171 A0A1B0GW15 77 aa13.15□□□□□ -0.3
CIRBP-226ENST00000590171 CCL25O15444 150 aa13.15□□□□□ -0.3
CIRBP-226ENST00000590171 GVQW2A0A096LPI5 108 aaPredicted RBP13.14□□□□□ -0.31
CIRBP-226ENST00000590171 MRPL54Q6P161 138 aaKnown RBP13.14□□□□□ -0.31
CIRBP-226ENST00000590171 ZNF664Q8N3J9 261 aa13.14□□□□□ -0.31
CIRBP-226ENST00000590171 KIR2DL4Q99706 377 aa13.14□□□□□ -0.31
CIRBP-226ENST00000590171 A0A1B0GXF2 115 aa13.13□□□□□ -0.31
CIRBP-226ENST00000590171 LINC00862A6NCI5 91 aa13.13□□□□□ -0.31
CIRBP-226ENST00000590171 PPP1R2P9O14990 202 aa13.13□□□□□ -0.31
CIRBP-226ENST00000590171 CHTF8P0CG12 524 aa13.13□□□□□ -0.31
CIRBP-226ENST00000590171 CKS2P33552 79 aa13.12□□□□□ -0.31
CIRBP-226ENST00000590171 RPL37AP61513 92 aaKnown RBP13.12□□□□□ -0.31
CIRBP-226ENST00000590171 HBBP68871 147 aa13.12□□□□□ -0.31
CIRBP-226ENST00000590171 UBE2D4Q9Y2X8 147 aa13.12□□□□□ -0.31
CIRBP-226ENST00000590171 TRBV24-1A0A075B6N3 115 aa13.11□□□□□ -0.31
CIRBP-226ENST00000590171 KRTAP29-1A8MX34 341 aaPredicted RBP13.11□□□□□ -0.31
CIRBP-226ENST00000590171 J3QL48 77 aa13.11□□□□□ -0.31
CIRBP-226ENST00000590171 SS18Q15532 418 aa13.11□□□□□ -0.31
CIRBP-226ENST00000590171 CLLU1Q5K131 121 aa13.11□□□□□ -0.31
CIRBP-226ENST00000590171 C20orf78Q9BR46 151 aa13.11□□□□□ -0.31
CIRBP-226ENST00000590171 SPACA4Q8TDM5 124 aa13.1□□□□□ -0.31
CIRBP-226ENST00000590171 CSDC2Q9Y534 153 aaKnown RBP13.1□□□□□ -0.31
CIRBP-226ENST00000590171 D6R8Y8 96 aa13.09□□□□□ -0.31
CIRBP-226ENST00000590171 TNFRSF6BO95407 300 aa13.09□□□□□ -0.31
CIRBP-226ENST00000590171 S100A8P05109 93 aa13.09□□□□□ -0.31
CIRBP-226ENST00000590171 RPL32P62910 135 aaKnown RBP13.09□□□□□ -0.31
CIRBP-226ENST00000590171 COX6A2Q02221 97 aa13.09□□□□□ -0.31
CIRBP-226ENST00000590171 CD164L2Q6UWJ8 174 aa13.09□□□□□ -0.31
CIRBP-226ENST00000590171 A0A087WYN8 130 aa13.08□□□□□ -0.32
CIRBP-226ENST00000590171 IGHV1-58A0A0C4DH39 117 aa13.08□□□□□ -0.32
CIRBP-226ENST00000590171 F8W036 122 aa13.08□□□□□ -0.32
CIRBP-226ENST00000590171 RNASE13Q5GAN3 156 aaKnown RBP13.08□□□□□ -0.32
CIRBP-226ENST00000590171 NPYP01303 97 aa13.07□□□□□ -0.32
CIRBP-226ENST00000590171 IFITM2Q01629 132 aa13.07□□□□□ -0.32
CIRBP-226ENST00000590171 SMAGPQ0VAQ4 97 aa13.07□□□□□ -0.32
CIRBP-226ENST00000590171 Q6ZUT4 128 aa13.07□□□□□ -0.32
CIRBP-226ENST00000590171 PRSS3P2Q8NHM4 247 aa13.07□□□□□ -0.32
CIRBP-226ENST00000590171 DPH3Q96FX2 82 aa13.07□□□□□ -0.32
CIRBP-226ENST00000590171 SMIM2Q9BVW6 85 aa13.07□□□□□ -0.32
CIRBP-226ENST00000590171 HNRNPA3P51991 378 aaKnown RBP13.06□□□□□ -0.32
CIRBP-226ENST00000590171 LINC00526Q96FQ7 95 aa13.06□□□□□ -0.32
CIRBP-226ENST00000590171 PNRC1Q12796 327 aaPredicted RBP13.05□□□□□ -0.32
CIRBP-226ENST00000590171 ATP5L2Q7Z4Y8 100 aa13.05□□□□□ -0.32
CIRBP-226ENST00000590171 TMEM18Q96B42 140 aa13.05□□□□□ -0.32
CIRBP-226ENST00000590171 TIMM21Q9BVV7 248 aa13.05□□□□□ -0.32
CIRBP-226ENST00000590171 LRP1Q07954 4544 aaKnown RBP13.05□□□□□ -0.32
CIRBP-226ENST00000590171 PKHD1L1Q86WI1 4243 aa13.05□□□□□ -0.32
CIRBP-226ENST00000590171 C1orf196B1AJZ1 125 aa13.04□□□□□ -0.32
CIRBP-226ENST00000590171 PPBPP02775 128 aa13.04□□□□□ -0.32
CIRBP-226ENST00000590171 PLAC8Q9NZF1 115 aa13.04□□□□□ -0.32
CIRBP-226ENST00000590171 TRAV13-1A0A0B4J241 112 aa13.03□□□□□ -0.32
CIRBP-226ENST00000590171 IGKV2-24A0A0C4DH68 120 aa13.03□□□□□ -0.32
CIRBP-226ENST00000590171 PHOX2AO14813 284 aa13.03□□□□□ -0.32
CIRBP-226ENST00000590171 TCAPO15273 167 aa13.03□□□□□ -0.32
CIRBP-226ENST00000590171 RPL39P62891 51 aaKnown RBP13.03□□□□□ -0.32
CIRBP-226ENST00000590171 FAT3Q8TDW7 4589 aa13.03□□□□□ -0.32
CIRBP-226ENST00000590171 ORMDL3Q8N138 153 aa13.02□□□□□ -0.33
CIRBP-226ENST00000590171 CARD19Q96LW7 228 aa13.02□□□□□ -0.33
CIRBP-226ENST00000590171 A0A096LNI7 61 aa13.01□□□□□ -0.33
CIRBP-226ENST00000590171 ZNF561-AS1K7EIQ3 104 aa13.01□□□□□ -0.33
CIRBP-226ENST00000590171 MAJINQ3KP22 176 aa13.01□□□□□ -0.33
CIRBP-226ENST00000590171 FAM104AQ969W3 186 aa13.01□□□□□ -0.33
CIRBP-226ENST00000590171 COX7A2LO14548 114 aa13□□□□□ -0.33
CIRBP-226ENST00000590171 MALP21145 153 aa13□□□□□ -0.33
CIRBP-226ENST00000590171 UQCC3Q6UW78 93 aa13□□□□□ -0.33
CIRBP-226ENST00000590171 TMEM136Q6ZRR5 245 aa13□□□□□ -0.33
CIRBP-226ENST00000590171 ANAPC16Q96DE5 110 aa13□□□□□ -0.33
CIRBP-226ENST00000590171 OXTP01178 125 aa12.99□□□□□ -0.33
CIRBP-226ENST00000590171 MT-ND4LP03901 98 aa12.99□□□□□ -0.33
CIRBP-226ENST00000590171 SYCNQ0VAF6 134 aa12.99□□□□□ -0.33
CIRBP-226ENST00000590171 PRELID3AQ96N28 172 aa12.99□□□□□ -0.33
CIRBP-226ENST00000590171 SPANXA1Q9NS26 97 aa12.99□□□□□ -0.33
CIRBP-226ENST00000590171 C5orf38Q86SI9 138 aa12.98□□□□□ -0.33
CIRBP-226ENST00000590171 STPG4Q8N801 248 aa12.98□□□□□ -0.33
CIRBP-226ENST00000590171 OPRPNQ99935 248 aaPredicted RBP12.98□□□□□ -0.33
CIRBP-226ENST00000590171 IGLV4-69A0A075B6H9 119 aa12.97□□□□□ -0.33
CIRBP-226ENST00000590171 MRPS36P82909 103 aaKnown RBP12.96□□□□□ -0.33
CIRBP-226ENST00000590171 PKIGQ9Y2B9 76 aa12.96□□□□□ -0.33
CIRBP-226ENST00000590171 ADCYAP1P18509 176 aa12.95□□□□□ -0.34
CIRBP-226ENST00000590171 Q6ZRU5 148 aa12.95□□□□□ -0.34
CIRBP-226ENST00000590171 TMEM218A2RU14 115 aa12.94□□□□□ -0.34
CIRBP-226ENST00000590171 PRSS47A8MTI9 375 aa12.94□□□□□ -0.34
CIRBP-226ENST00000590171 RAB5AP20339 215 aa12.94□□□□□ -0.34
CIRBP-226ENST00000590171 COMMD7Q86VX2 200 aa12.94□□□□□ -0.34
CIRBP-226ENST00000590171 C7orf33Q8WU49 177 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 258 ms