RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 AMTP48728 403 aa11.48□□□□□ -0.57
H3F3B-209ENST00000589949 RPL39LQ96EH5 51 aaKnown RBP11.48□□□□□ -0.57
H3F3B-209ENST00000589949 COTL1Q14019 142 aa11.47□□□□□ -0.57
H3F3B-209ENST00000589949 C15orf56Q8N910 161 aa11.47□□□□□ -0.57
H3F3B-209ENST00000589949 NUP35Q8NFH5 326 aa11.47□□□□□ -0.57
H3F3B-209ENST00000589949 HIGD1CA8MV81 97 aa11.46□□□□□ -0.57
H3F3B-209ENST00000589949 RAB5AP20339 215 aa11.46□□□□□ -0.57
H3F3B-209ENST00000589949 IGKV3OR2-268A0A0C4DH90 116 aa11.44□□□□□ -0.58
H3F3B-209ENST00000589949 GAGE12HA6NDE8 117 aa11.44□□□□□ -0.58
H3F3B-209ENST00000589949 UBE2L6O14933 153 aa11.44□□□□□ -0.58
H3F3B-209ENST00000589949 GAS8-AS1O95177 125 aa11.44□□□□□ -0.58
H3F3B-209ENST00000589949 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.43□□□□□ -0.58
H3F3B-209ENST00000589949 IGKV2-29A2NJV5 120 aaPredicted RBP11.43□□□□□ -0.58
H3F3B-209ENST00000589949 COX19Q49B96 90 aa11.43□□□□□ -0.58
H3F3B-209ENST00000589949 SERTAD4-AS1Q5TG53 156 aa11.43□□□□□ -0.58
H3F3B-209ENST00000589949 ATP5L2Q7Z4Y8 100 aa11.43□□□□□ -0.58
H3F3B-209ENST00000589949 IGHV3-64A0A075B6Q5 118 aa11.42□□□□□ -0.58
H3F3B-209ENST00000589949 A0A087WYN8 130 aa11.42□□□□□ -0.58
H3F3B-209ENST00000589949 MT1HL1P0DM35 61 aa11.42□□□□□ -0.58
H3F3B-209ENST00000589949 RPS10P46783 165 aaKnown RBP11.42□□□□□ -0.58
H3F3B-209ENST00000589949 SPACA4Q8TDM5 124 aa11.42□□□□□ -0.58
H3F3B-209ENST00000589949 BORCS7Q96B45 105 aa11.41□□□□□ -0.58
H3F3B-209ENST00000589949 AP5S1Q9NUS5 200 aa11.41□□□□□ -0.58
H3F3B-209ENST00000589949 A0A1B0GUT8 65 aa11.4□□□□□ -0.58
H3F3B-209ENST00000589949 RIGQ13278 110 aa11.4□□□□□ -0.58
H3F3B-209ENST00000589949 HIGD2BQ4VC39 106 aa11.4□□□□□ -0.58
H3F3B-209ENST00000589949 MRPL54Q6P161 138 aaKnown RBP11.4□□□□□ -0.58
H3F3B-209ENST00000589949 CHCHD10Q8WYQ3 142 aaPredicted RBP11.4□□□□□ -0.58
H3F3B-209ENST00000589949 A0A1B0GW15 77 aa11.39□□□□□ -0.59
H3F3B-209ENST00000589949 A0A1B0GXF2 115 aa11.39□□□□□ -0.59
H3F3B-209ENST00000589949 SDHAF1A6NFY7 115 aa11.39□□□□□ -0.59
H3F3B-209ENST00000589949 FGF6P10767 208 aa11.39□□□□□ -0.59
H3F3B-209ENST00000589949 GNB1LQ9BYB4 327 aa11.39□□□□□ -0.59
H3F3B-209ENST00000589949 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.38□□□□□ -0.59
H3F3B-209ENST00000589949 NCR2O95944 276 aa11.38□□□□□ -0.59
H3F3B-209ENST00000589949 HBBP68871 147 aa11.38□□□□□ -0.59
H3F3B-209ENST00000589949 COX6A2Q02221 97 aa11.38□□□□□ -0.59
H3F3B-209ENST00000589949 RNASEKQ6P5S7 137 aaKnown RBP11.38□□□□□ -0.59
H3F3B-209ENST00000589949 PRSS3P2Q8NHM4 247 aa11.38□□□□□ -0.59
H3F3B-209ENST00000589949 APCSP02743 223 aa11.37□□□□□ -0.59
H3F3B-209ENST00000589949 MT-ND6P03923 174 aa11.37□□□□□ -0.59
H3F3B-209ENST00000589949 S100A8P05109 93 aa11.37□□□□□ -0.59
H3F3B-209ENST00000589949 FOXI1Q12951 378 aa11.37□□□□□ -0.59
H3F3B-209ENST00000589949 AMMECR1LQ6DCA0 310 aa11.37□□□□□ -0.59
H3F3B-209ENST00000589949 DPH3Q96FX2 82 aa11.37□□□□□ -0.59
H3F3B-209ENST00000589949 RNF185Q96GF1 192 aa11.37□□□□□ -0.59
H3F3B-209ENST00000589949 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
H3F3B-209ENST00000589949 TRAPPC1Q9Y5R8 145 aa11.37□□□□□ -0.59
H3F3B-209ENST00000589949 TSHBP01222 138 aa11.36□□□□□ -0.59
H3F3B-209ENST00000589949 TMEM136Q6ZRR5 245 aa11.36□□□□□ -0.59
H3F3B-209ENST00000589949 UBR4Q5T4S7 5183 aa11.35□□□□□ -0.59
H3F3B-209ENST00000589949 TRBV6-5A0A0K0K1A5 114 aa11.35□□□□□ -0.59
H3F3B-209ENST00000589949 C1orf196B1AJZ1 125 aa11.35□□□□□ -0.59
H3F3B-209ENST00000589949 H7C423 109 aa11.35□□□□□ -0.59
H3F3B-209ENST00000589949 TRGC2P03986 189 aa11.35□□□□□ -0.59
H3F3B-209ENST00000589949 ESDP10768 282 aa11.35□□□□□ -0.59
H3F3B-209ENST00000589949 CAMPP49913 170 aa11.35□□□□□ -0.59
H3F3B-209ENST00000589949 SMIM15Q7Z3B0 74 aa11.35□□□□□ -0.59
H3F3B-209ENST00000589949 GVQW2A0A096LPI5 108 aaPredicted RBP11.34□□□□□ -0.59
H3F3B-209ENST00000589949 PHOX2AO14813 284 aa11.34□□□□□ -0.59
H3F3B-209ENST00000589949 CFAP161Q6P656 301 aa11.34□□□□□ -0.59
H3F3B-209ENST00000589949 PLA2G2DQ9UNK4 145 aa11.34□□□□□ -0.59
H3F3B-209ENST00000589949 I3L3M4 83 aa11.33□□□□□ -0.6
H3F3B-209ENST00000589949 PMCHP20382 165 aa11.33□□□□□ -0.6
H3F3B-209ENST00000589949 FABP9Q0Z7S8 132 aa11.33□□□□□ -0.6
H3F3B-209ENST00000589949 Q6ZRU5 148 aa11.33□□□□□ -0.6
H3F3B-209ENST00000589949 OR5A1Q8NGJ0 315 aa11.33□□□□□ -0.6
H3F3B-209ENST00000589949 LINC00526Q96FQ7 95 aa11.33□□□□□ -0.6
H3F3B-209ENST00000589949 MRPL18Q9H0U6 180 aaKnown RBP11.33□□□□□ -0.6
H3F3B-209ENST00000589949 IGKV2-24A0A0C4DH68 120 aa11.32□□□□□ -0.6
H3F3B-209ENST00000589949 LINC00959A0A1B0GUT2 108 aa11.32□□□□□ -0.6
H3F3B-209ENST00000589949 XCL1P47992 114 aa11.32□□□□□ -0.6
H3F3B-209ENST00000589949 RAB5BP61020 215 aa11.32□□□□□ -0.6
H3F3B-209ENST00000589949 A0A096LNI7 61 aa11.31□□□□□ -0.6
H3F3B-209ENST00000589949 CCL25O15444 150 aa11.31□□□□□ -0.6
H3F3B-209ENST00000589949 ZNF25P17030 456 aaPredicted RBP11.31□□□□□ -0.6
H3F3B-209ENST00000589949 RAB4AP20338 218 aa11.31□□□□□ -0.6
H3F3B-209ENST00000589949 POLR2KP53803 58 aaKnown RBP11.31□□□□□ -0.6
H3F3B-209ENST00000589949 MAJINQ3KP22 176 aa11.31□□□□□ -0.6
H3F3B-209ENST00000589949 TMEM191AQ9H0A3 160 aa11.31□□□□□ -0.6
H3F3B-209ENST00000589949 ST20Q9HBF5 79 aa11.31□□□□□ -0.6
H3F3B-209ENST00000589949 AMN1Q8IY45 258 aa11.3□□□□□ -0.6
H3F3B-209ENST00000589949 TMA7Q9Y2S6 64 aaKnown RBP11.3□□□□□ -0.6
H3F3B-209ENST00000589949 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
H3F3B-209ENST00000589949 CDC42SE2Q9NRR3 84 aa11.29□□□□□ -0.6
H3F3B-209ENST00000589949 TRBV27A0A0K0K1C4 114 aa11.28□□□□□ -0.6
H3F3B-209ENST00000589949 FAM104BQ5XKR9 115 aa11.28□□□□□ -0.6
H3F3B-209ENST00000589949 MRPL52Q86TS9 123 aaKnown RBP11.28□□□□□ -0.6
H3F3B-209ENST00000589949 STPG4Q8N801 248 aa11.28□□□□□ -0.6
H3F3B-209ENST00000589949 MRAP2Q96G30 205 aa11.27□□□□□ -0.61
H3F3B-209ENST00000589949 HIST1H2BKO60814 126 aa11.26□□□□□ -0.61
H3F3B-209ENST00000589949 HIST1H2BJP06899 126 aa11.26□□□□□ -0.61
H3F3B-209ENST00000589949 HIST1H2BOP23527 126 aa11.26□□□□□ -0.61
H3F3B-209ENST00000589949 HIST1H2BBP33778 126 aa11.26□□□□□ -0.61
H3F3B-209ENST00000589949 HIST1H2BDP58876 126 aa11.26□□□□□ -0.61
H3F3B-209ENST00000589949 HIST1H2BCP62807 126 aa11.26□□□□□ -0.61
H3F3B-209ENST00000589949 PRR3P79522 188 aaKnown RBP11.26□□□□□ -0.61
H3F3B-209ENST00000589949 HIST2H2BEQ16778 126 aa11.26□□□□□ -0.61
H3F3B-209ENST00000589949 KIAA1644Q3SXP7 199 aa11.26□□□□□ -0.61
H3F3B-209ENST00000589949 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms