RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 PPP1R17O96001 155 aa9.29□□□□□ -0.92
MBD1-220ENST00000589758 POLR2KP53803 58 aaKnown RBP9.29□□□□□ -0.92
MBD1-220ENST00000589758 C20orf203Q8NBC4 194 aa9.29□□□□□ -0.92
MBD1-220ENST00000589758 RPS10P5Q9NQ39 176 aa9.29□□□□□ -0.92
MBD1-220ENST00000589758 CARHSP1Q9Y2V2 147 aaKnown RBP9.29□□□□□ -0.92
MBD1-220ENST00000589758 TSHBP01222 138 aa9.28□□□□□ -0.92
MBD1-220ENST00000589758 SUMO2P61956 95 aaKnown RBP9.28□□□□□ -0.92
MBD1-220ENST00000589758 IMMP2LQ96T52 175 aa9.28□□□□□ -0.92
MBD1-220ENST00000589758 IGLV4-60A0A075B6I1 120 aa9.27□□□□□ -0.93
MBD1-220ENST00000589758 IGLV10-54A0A075B6I4 117 aa9.27□□□□□ -0.93
MBD1-220ENST00000589758 VCYO14598 125 aa9.27□□□□□ -0.93
MBD1-220ENST00000589758 TNFRSF6BO95407 300 aa9.27□□□□□ -0.93
MBD1-220ENST00000589758 APOC3P02656 99 aa9.27□□□□□ -0.93
MBD1-220ENST00000589758 FCER1GP30273 86 aa9.27□□□□□ -0.93
MBD1-220ENST00000589758 AMMECR1LQ6DCA0 310 aa9.27□□□□□ -0.93
MBD1-220ENST00000589758 TRBV27A0A0K0K1C4 114 aa9.26□□□□□ -0.93
MBD1-220ENST00000589758 NPYP01303 97 aa9.26□□□□□ -0.93
MBD1-220ENST00000589758 S100PP25815 95 aa9.26□□□□□ -0.93
MBD1-220ENST00000589758 KRTAP10-4P60372 401 aaPredicted RBP9.26□□□□□ -0.93
MBD1-220ENST00000589758 RNASEKQ6P5S7 137 aaKnown RBP9.26□□□□□ -0.93
MBD1-220ENST00000589758 TMEM136Q6ZRR5 245 aa9.26□□□□□ -0.93
MBD1-220ENST00000589758 PPBPP02775 128 aa9.25□□□□□ -0.93
MBD1-220ENST00000589758 RHEBQ15382 184 aa9.25□□□□□ -0.93
MBD1-220ENST00000589758 NDUFA5Q16718 116 aa9.25□□□□□ -0.93
MBD1-220ENST00000589758 ORMDL3Q8N138 153 aa9.25□□□□□ -0.93
MBD1-220ENST00000589758 PRELID3AQ96N28 172 aa9.25□□□□□ -0.93
MBD1-220ENST00000589758 C20orf78Q9BR46 151 aa9.25□□□□□ -0.93
MBD1-220ENST00000589758 AP5S1Q9NUS5 200 aa9.25□□□□□ -0.93
MBD1-220ENST00000589758 TRBV24-1A0A075B6N3 115 aa9.24□□□□□ -0.93
MBD1-220ENST00000589758 IGKV3OR2-268A0A0C4DH90 116 aa9.24□□□□□ -0.93
MBD1-220ENST00000589758 hDV102S1A0JD36 115 aa9.24□□□□□ -0.93
MBD1-220ENST00000589758 OXTP01178 125 aa9.24□□□□□ -0.93
MBD1-220ENST00000589758 FGF6P10767 208 aa9.24□□□□□ -0.93
MBD1-220ENST00000589758 RPL37AP61513 92 aaKnown RBP9.24□□□□□ -0.93
MBD1-220ENST00000589758 CNBPP62633 177 aaKnown RBP9.24□□□□□ -0.93
MBD1-220ENST00000589758 SDIM1Q6ZPB5 146 aa9.24□□□□□ -0.93
MBD1-220ENST00000589758 KIR2DL4Q99706 377 aa9.24□□□□□ -0.93
MBD1-220ENST00000589758 TRAV9-1A0A075B6T8 112 aa9.23□□□□□ -0.93
MBD1-220ENST00000589758 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.23□□□□□ -0.93
MBD1-220ENST00000589758 H7C423 109 aa9.23□□□□□ -0.93
MBD1-220ENST00000589758 ESDP10768 282 aa9.23□□□□□ -0.93
MBD1-220ENST00000589758 SLC7A5P1Q8MH63 180 aa9.23□□□□□ -0.93
MBD1-220ENST00000589758 SMIM2Q9BVW6 85 aa9.23□□□□□ -0.93
MBD1-220ENST00000589758 LOC389332A0A1B0GUA5 103 aa9.22□□□□□ -0.93
MBD1-220ENST00000589758 SNAPINO95295 136 aa9.22□□□□□ -0.93
MBD1-220ENST00000589758 SVBPQ8N300 66 aa9.22□□□□□ -0.93
MBD1-220ENST00000589758 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.22□□□□□ -0.93
MBD1-220ENST00000589758 IGHV3-64A0A075B6Q5 118 aa9.21□□□□□ -0.94
MBD1-220ENST00000589758 PHOX2AO14813 284 aa9.21□□□□□ -0.94
MBD1-220ENST00000589758 TCAPO15273 167 aa9.21□□□□□ -0.94
MBD1-220ENST00000589758 KIAA1644Q3SXP7 199 aa9.21□□□□□ -0.94
MBD1-220ENST00000589758 CFAP161Q6P656 301 aa9.21□□□□□ -0.94
MBD1-220ENST00000589758 TMEM101Q96IK0 257 aa9.21□□□□□ -0.94
MBD1-220ENST00000589758 RPL32P62910 135 aaKnown RBP9.2□□□□□ -0.94
MBD1-220ENST00000589758 OR5A1Q8NGJ0 315 aa9.2□□□□□ -0.94
MBD1-220ENST00000589758 ZNF25P17030 456 aaPredicted RBP9.19□□□□□ -0.94
MBD1-220ENST00000589758 CIRBPQ14011 172 aaKnown RBP9.19□□□□□ -0.94
MBD1-220ENST00000589758 SERTAD4-AS1Q5TG53 156 aa9.19□□□□□ -0.94
MBD1-220ENST00000589758 MAP1LC3AQ9H492 121 aa9.19□□□□□ -0.94
MBD1-220ENST00000589758 GAGE12HA6NDE8 117 aa9.18□□□□□ -0.94
MBD1-220ENST00000589758 PANO1I0J062 215 aa9.18□□□□□ -0.94
MBD1-220ENST00000589758 RAB5AP20339 215 aa9.18□□□□□ -0.94
MBD1-220ENST00000589758 DPH3Q96FX2 82 aa9.18□□□□□ -0.94
MBD1-220ENST00000589758 LAMTOR2Q9Y2Q5 125 aa9.18□□□□□ -0.94
MBD1-220ENST00000589758 TGIF2-C20orf24A0A0A6YYL0 155 aa9.17□□□□□ -0.94
MBD1-220ENST00000589758 SLPIP03973 132 aa9.17□□□□□ -0.94
MBD1-220ENST00000589758 RPL39P62891 51 aaKnown RBP9.17□□□□□ -0.94
MBD1-220ENST00000589758 C15orf56Q8N910 161 aa9.17□□□□□ -0.94
MBD1-220ENST00000589758 TMEM18Q96B42 140 aa9.17□□□□□ -0.94
MBD1-220ENST00000589758 GNB1LQ9BYB4 327 aa9.17□□□□□ -0.94
MBD1-220ENST00000589758 RNASE13Q5GAN3 156 aaKnown RBP9.16□□□□□ -0.94
MBD1-220ENST00000589758 MRPL52Q86TS9 123 aaKnown RBP9.16□□□□□ -0.94
MBD1-220ENST00000589758 ZNF664Q8N3J9 261 aa9.16□□□□□ -0.94
MBD1-220ENST00000589758 CHCHD10Q8WYQ3 142 aaPredicted RBP9.16□□□□□ -0.94
MBD1-220ENST00000589758 UBE2D4Q9Y2X8 147 aa9.16□□□□□ -0.94
MBD1-220ENST00000589758 PRSS47A8MTI9 375 aa9.15□□□□□ -0.94
MBD1-220ENST00000589758 SMAGPQ0VAQ4 97 aa9.15□□□□□ -0.94
MBD1-220ENST00000589758 COX19Q49B96 90 aa9.15□□□□□ -0.94
MBD1-220ENST00000589758 Q8N8P6 123 aa9.15□□□□□ -0.94
MBD1-220ENST00000589758 MRPL18Q9H0U6 180 aaKnown RBP9.15□□□□□ -0.94
MBD1-220ENST00000589758 CDC42SE2Q9NRR3 84 aa9.15□□□□□ -0.94
MBD1-220ENST00000589758 A0A087WYN8 130 aa9.14□□□□□ -0.95
MBD1-220ENST00000589758 FABP9Q0Z7S8 132 aa9.14□□□□□ -0.95
MBD1-220ENST00000589758 SPACA4Q8TDM5 124 aa9.14□□□□□ -0.95
MBD1-220ENST00000589758 LINC00959A0A1B0GUT2 108 aa9.13□□□□□ -0.95
MBD1-220ENST00000589758 MT-ND6P03923 174 aa9.13□□□□□ -0.95
MBD1-220ENST00000589758 IFI27P40305 119 aaPredicted RBP9.13□□□□□ -0.95
MBD1-220ENST00000589758 HNRNPA3P51991 378 aaKnown RBP9.13□□□□□ -0.95
MBD1-220ENST00000589758 Q6ZUT4 128 aa9.13□□□□□ -0.95
MBD1-220ENST00000589758 LRP1Q07954 4544 aaKnown RBP9.13□□□□□ -0.95
MBD1-220ENST00000589758 GVQW2A0A096LPI5 108 aaPredicted RBP9.12□□□□□ -0.95
MBD1-220ENST00000589758 CCL25O15444 150 aa9.12□□□□□ -0.95
MBD1-220ENST00000589758 CHTF8P0CG12 524 aa9.12□□□□□ -0.95
MBD1-220ENST00000589758 XCL1P47992 114 aa9.12□□□□□ -0.95
MBD1-220ENST00000589758 SS18Q15532 418 aa9.12□□□□□ -0.95
MBD1-220ENST00000589758 HIGD2BQ4VC39 106 aa9.12□□□□□ -0.95
MBD1-220ENST00000589758 Q6ZRU5 148 aa9.12□□□□□ -0.95
MBD1-220ENST00000589758 OPRPNQ99935 248 aaPredicted RBP9.12□□□□□ -0.95
MBD1-220ENST00000589758 ALKBH7Q9BT30 221 aaPredicted RBP9.12□□□□□ -0.95
MBD1-220ENST00000589758 TIMM21Q9BVV7 248 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms