RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 GATD1Q8NB37 220 aa7.88□□□□□ -1.15
VAT1-206ENST00000589709 OXTP01178 125 aa7.87□□□□□ -1.15
VAT1-206ENST00000589709 TRGC2P03986 189 aa7.87□□□□□ -1.15
VAT1-206ENST00000589709 S100A6P06703 90 aa7.87□□□□□ -1.15
VAT1-206ENST00000589709 SDIM1Q6ZPB5 146 aa7.87□□□□□ -1.15
VAT1-206ENST00000589709 TMEM136Q6ZRR5 245 aa7.87□□□□□ -1.15
VAT1-206ENST00000589709 SMIM15Q7Z3B0 74 aa7.87□□□□□ -1.15
VAT1-206ENST00000589709 IGLV4-60A0A075B6I1 120 aa7.86□□□□□ -1.15
VAT1-206ENST00000589709 CNBPP62633 177 aaKnown RBP7.86□□□□□ -1.15
VAT1-206ENST00000589709 MRPL18Q9H0U6 180 aaKnown RBP7.86□□□□□ -1.15
VAT1-206ENST00000589709 LRP1Q07954 4544 aaKnown RBP7.86□□□□□ -1.15
VAT1-206ENST00000589709 IGLV10-54A0A075B6I4 117 aa7.85□□□□□ -1.15
VAT1-206ENST00000589709 APCSP02743 223 aa7.85□□□□□ -1.15
VAT1-206ENST00000589709 FABP9Q0Z7S8 132 aa7.85□□□□□ -1.15
VAT1-206ENST00000589709 COTL1Q14019 142 aa7.85□□□□□ -1.15
VAT1-206ENST00000589709 TWIST1Q15672 202 aa7.85□□□□□ -1.15
VAT1-206ENST00000589709 FAT3Q8TDW7 4589 aa7.84□□□□□ -1.15
VAT1-206ENST00000589709 PHOX2AO14813 284 aa7.84□□□□□ -1.15
VAT1-206ENST00000589709 AMTP48728 403 aa7.84□□□□□ -1.15
VAT1-206ENST00000589709 CAMPP49913 170 aa7.84□□□□□ -1.15
VAT1-206ENST00000589709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.84□□□□□ -1.15
VAT1-206ENST00000589709 hDV102S1A0JD36 115 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 UBE2L6O14933 153 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 HIST1H2BKO60814 126 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 HIST1H2BJP06899 126 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 HIST1H2BOP23527 126 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 HIST1H2BBP33778 126 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 HIST1H2BDP58876 126 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 RPL37AP61513 92 aaKnown RBP7.83□□□□□ -1.16
VAT1-206ENST00000589709 HIST1H2BCP62807 126 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 CIRBPQ14011 172 aaKnown RBP7.83□□□□□ -1.16
VAT1-206ENST00000589709 HIST2H2BEQ16778 126 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.83□□□□□ -1.16
VAT1-206ENST00000589709 HIST1H2BHQ93079 126 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 HIST1H2BNQ99877 126 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 HIST1H2BMQ99879 126 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 TMEM191AQ9H0A3 160 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 AP5S1Q9NUS5 200 aa7.83□□□□□ -1.16
VAT1-206ENST00000589709 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.82□□□□□ -1.16
VAT1-206ENST00000589709 PANO1I0J062 215 aa7.82□□□□□ -1.16
VAT1-206ENST00000589709 NCR2O95944 276 aa7.82□□□□□ -1.16
VAT1-206ENST00000589709 SERTAD4-AS1Q5TG53 156 aa7.82□□□□□ -1.16
VAT1-206ENST00000589709 PKHD1L1Q86WI1 4243 aa7.82□□□□□ -1.16
VAT1-206ENST00000589709 IGHV3-64A0A075B6Q5 118 aa7.81□□□□□ -1.16
VAT1-206ENST00000589709 H7C423 109 aa7.81□□□□□ -1.16
VAT1-206ENST00000589709 PPBPP02775 128 aa7.81□□□□□ -1.16
VAT1-206ENST00000589709 SLPIP03973 132 aa7.81□□□□□ -1.16
VAT1-206ENST00000589709 COA6Q5JTJ3 125 aaKnown RBP7.81□□□□□ -1.16
VAT1-206ENST00000589709 CFAP161Q6P656 301 aa7.81□□□□□ -1.16
VAT1-206ENST00000589709 RNF185Q96GF1 192 aa7.81□□□□□ -1.16
VAT1-206ENST00000589709 TRAV26-2A0A0B4J265 109 aa7.8□□□□□ -1.16
VAT1-206ENST00000589709 FAM104BQ5XKR9 115 aa7.8□□□□□ -1.16
VAT1-206ENST00000589709 LAMTOR2Q9Y2Q5 125 aa7.8□□□□□ -1.16
VAT1-206ENST00000589709 GAGE12HA6NDE8 117 aa7.79□□□□□ -1.16
VAT1-206ENST00000589709 RPL39LQ96EH5 51 aaKnown RBP7.79□□□□□ -1.16
VAT1-206ENST00000589709 HMCN2Q8NDA2 5059 aa7.78□□□□□ -1.16
VAT1-206ENST00000589709 TRBV6-5A0A0K0K1A5 114 aa7.78□□□□□ -1.16
VAT1-206ENST00000589709 SDHAF1A6NFY7 115 aa7.78□□□□□ -1.16
VAT1-206ENST00000589709 C5orf52A6NGY3 159 aa7.78□□□□□ -1.16
VAT1-206ENST00000589709 PPP1R17O96001 155 aa7.78□□□□□ -1.16
VAT1-206ENST00000589709 HNRNPA3P51991 378 aaKnown RBP7.78□□□□□ -1.16
VAT1-206ENST00000589709 NDUFA6P56556 154 aa7.78□□□□□ -1.16
VAT1-206ENST00000589709 AMMECR1LQ6DCA0 310 aa7.78□□□□□ -1.16
VAT1-206ENST00000589709 C15orf56Q8N910 161 aa7.78□□□□□ -1.16
VAT1-206ENST00000589709 I3L3M4 83 aa7.77□□□□□ -1.17
VAT1-206ENST00000589709 FGF6P10767 208 aa7.77□□□□□ -1.17
VAT1-206ENST00000589709 ZNF25P17030 456 aaPredicted RBP7.77□□□□□ -1.17
VAT1-206ENST00000589709 BAGE3Q86Y29 109 aa7.77□□□□□ -1.17
VAT1-206ENST00000589709 ORMDL3Q8N138 153 aa7.77□□□□□ -1.17
VAT1-206ENST00000589709 SPACA4Q8TDM5 124 aa7.77□□□□□ -1.17
VAT1-206ENST00000589709 CHCHD10Q8WYQ3 142 aaPredicted RBP7.77□□□□□ -1.17
VAT1-206ENST00000589709 DPH3Q96FX2 82 aa7.77□□□□□ -1.17
VAT1-206ENST00000589709 MRAP2Q96G30 205 aa7.77□□□□□ -1.17
VAT1-206ENST00000589709 ALKBH7Q9BT30 221 aaPredicted RBP7.77□□□□□ -1.17
VAT1-206ENST00000589709 A0A087WYN8 130 aa7.76□□□□□ -1.17
VAT1-206ENST00000589709 CKS2P33552 79 aa7.76□□□□□ -1.17
VAT1-206ENST00000589709 SNRPEP62304 92 aaKnown RBP7.76□□□□□ -1.17
VAT1-206ENST00000589709 RNASEKQ6P5S7 137 aaKnown RBP7.76□□□□□ -1.17
VAT1-206ENST00000589709 PLAC8Q9NZF1 115 aa7.76□□□□□ -1.17
VAT1-206ENST00000589709 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.75□□□□□ -1.17
VAT1-206ENST00000589709 GVQW2A0A096LPI5 108 aaPredicted RBP7.75□□□□□ -1.17
VAT1-206ENST00000589709 IGKV3OR2-268A0A0C4DH90 116 aa7.75□□□□□ -1.17
VAT1-206ENST00000589709 IGKV2-29A2NJV5 120 aaPredicted RBP7.75□□□□□ -1.17
VAT1-206ENST00000589709 CHTF8P0CG12 524 aa7.75□□□□□ -1.17
VAT1-206ENST00000589709 ESDP10768 282 aa7.75□□□□□ -1.17
VAT1-206ENST00000589709 RAB4AP20338 218 aa7.75□□□□□ -1.17
VAT1-206ENST00000589709 PMCHP20382 165 aa7.75□□□□□ -1.17
VAT1-206ENST00000589709 S100A2P29034 98 aa7.75□□□□□ -1.17
VAT1-206ENST00000589709 KIAA1644Q3SXP7 199 aa7.75□□□□□ -1.17
VAT1-206ENST00000589709 MRPL51Q4U2R6 128 aaKnown RBP7.75□□□□□ -1.17
VAT1-206ENST00000589709 Q6ZRU5 148 aa7.75□□□□□ -1.17
VAT1-206ENST00000589709 AMN1Q8IY45 258 aa7.75□□□□□ -1.17
VAT1-206ENST00000589709 OR5A1Q8NGJ0 315 aa7.75□□□□□ -1.17
VAT1-206ENST00000589709 PRELID3AQ96N28 172 aa7.75□□□□□ -1.17
VAT1-206ENST00000589709 COX6A2Q02221 97 aa7.74□□□□□ -1.17
VAT1-206ENST00000589709 C18orf32Q8TCD1 76 aa7.74□□□□□ -1.17
VAT1-206ENST00000589709 PACRGQ96M98 296 aaPredicted RBP7.74□□□□□ -1.17
VAT1-206ENST00000589709 ST20Q9HBF5 79 aa7.74□□□□□ -1.17
VAT1-206ENST00000589709 D6R8Y8 96 aa7.73□□□□□ -1.17
VAT1-206ENST00000589709 TSHBP01222 138 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms