RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 ZNF25P17030 456 aaPredicted RBP6.38□□□□□ -1.39
PTPN2-208ENST00000589216 CKS2P33552 79 aa6.38□□□□□ -1.39
PTPN2-208ENST00000589216 RNASE13Q5GAN3 156 aaKnown RBP6.38□□□□□ -1.39
PTPN2-208ENST00000589216 MRPL52Q86TS9 123 aaKnown RBP6.38□□□□□ -1.39
PTPN2-208ENST00000589216 CHCHD10Q8WYQ3 142 aaPredicted RBP6.38□□□□□ -1.39
PTPN2-208ENST00000589216 SMIM2Q9BVW6 85 aa6.38□□□□□ -1.39
PTPN2-208ENST00000589216 TRBV24-1A0A075B6N3 115 aa6.37□□□□□ -1.39
PTPN2-208ENST00000589216 PANO1I0J062 215 aa6.37□□□□□ -1.39
PTPN2-208ENST00000589216 PPP1R2P9O14990 202 aa6.37□□□□□ -1.39
PTPN2-208ENST00000589216 SLPIP03973 132 aa6.37□□□□□ -1.39
PTPN2-208ENST00000589216 FCER1GP30273 86 aa6.37□□□□□ -1.39
PTPN2-208ENST00000589216 Q6ZUT4 128 aa6.37□□□□□ -1.39
PTPN2-208ENST00000589216 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
PTPN2-208ENST00000589216 OR5A1Q8NGJ0 315 aa6.37□□□□□ -1.39
PTPN2-208ENST00000589216 MYCBP2O75592 4640 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 hDV102S1A0JD36 115 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 TMEM218A2RU14 115 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 LINC00862A6NCI5 91 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 VCYO14598 125 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 PPP1R17O96001 155 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 MT-ND4LP03901 98 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 S100A8P05109 93 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 XCL1P47992 114 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 RPL39P62891 51 aaKnown RBP6.36□□□□□ -1.39
PTPN2-208ENST00000589216 FOXI1Q12951 378 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 UQCC3Q6UW78 93 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 COMMD7Q86VX2 200 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 FAM104AQ969W3 186 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 ANAPC16Q96DE5 110 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 C20orf78Q9BR46 151 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 CDC42SE2Q9NRR3 84 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 UBE2D4Q9Y2X8 147 aa6.36□□□□□ -1.39
PTPN2-208ENST00000589216 DMBT1Q9UGM3 2413 aaPredicted RBP6.36□□□□□ -1.39
PTPN2-208ENST00000589216 LINC00959A0A1B0GUT2 108 aa6.35□□□□□ -1.39
PTPN2-208ENST00000589216 F8W036 122 aa6.35□□□□□ -1.39
PTPN2-208ENST00000589216 CCL25O15444 150 aa6.35□□□□□ -1.39
PTPN2-208ENST00000589216 CNBPP62633 177 aaKnown RBP6.35□□□□□ -1.39
PTPN2-208ENST00000589216 RPL32P62910 135 aaKnown RBP6.35□□□□□ -1.39
PTPN2-208ENST00000589216 HIGD2BQ4VC39 106 aa6.35□□□□□ -1.39
PTPN2-208ENST00000589216 C9orf163Q8N9P6 203 aa6.35□□□□□ -1.39
PTPN2-208ENST00000589216 CIRBP-AS1Q8TBR5 109 aa6.35□□□□□ -1.39
PTPN2-208ENST00000589216 TMEM101Q96IK0 257 aa6.35□□□□□ -1.39
PTPN2-208ENST00000589216 BTF3L4Q96K17 158 aa6.35□□□□□ -1.39
PTPN2-208ENST00000589216 KIR2DL4Q99706 377 aa6.35□□□□□ -1.39
PTPN2-208ENST00000589216 CHAC1Q9BUX1 264 aa6.35□□□□□ -1.39
PTPN2-208ENST00000589216 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.35□□□□□ -1.39
PTPN2-208ENST00000589216 TCAPO15273 167 aa6.34□□□□□ -1.39
PTPN2-208ENST00000589216 C4orf48Q5BLP8 95 aa6.34□□□□□ -1.39
PTPN2-208ENST00000589216 ORMDL3Q8N138 153 aa6.34□□□□□ -1.39
PTPN2-208ENST00000589216 ZNF664Q8N3J9 261 aa6.34□□□□□ -1.39
PTPN2-208ENST00000589216 PRELID3AQ96N28 172 aa6.34□□□□□ -1.39
PTPN2-208ENST00000589216 GVQW2A0A096LPI5 108 aaPredicted RBP6.33□□□□□ -1.4
PTPN2-208ENST00000589216 PPBPP02775 128 aa6.33□□□□□ -1.4
PTPN2-208ENST00000589216 CHTF8P0CG12 524 aa6.33□□□□□ -1.4
PTPN2-208ENST00000589216 DGAT2L7PQ6IED9 249 aa6.33□□□□□ -1.4
PTPN2-208ENST00000589216 SDIM1Q6ZPB5 146 aa6.33□□□□□ -1.4
PTPN2-208ENST00000589216 TMEM136Q6ZRR5 245 aa6.33□□□□□ -1.4
PTPN2-208ENST00000589216 CLRN3Q8NCR9 226 aa6.33□□□□□ -1.4
PTPN2-208ENST00000589216 LINC00526Q96FQ7 95 aa6.33□□□□□ -1.4
PTPN2-208ENST00000589216 OPRPNQ99935 248 aaPredicted RBP6.33□□□□□ -1.4
PTPN2-208ENST00000589216 PHOX2AO14813 284 aa6.32□□□□□ -1.4
PTPN2-208ENST00000589216 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
PTPN2-208ENST00000589216 TIMM21Q9BVV7 248 aa6.32□□□□□ -1.4
PTPN2-208ENST00000589216 SEC11CQ9BY50 192 aa6.32□□□□□ -1.4
PTPN2-208ENST00000589216 CSDC2Q9Y534 153 aaKnown RBP6.32□□□□□ -1.4
PTPN2-208ENST00000589216 TRAV13-1A0A0B4J241 112 aa6.31□□□□□ -1.4
PTPN2-208ENST00000589216 LOC389332A0A1B0GUA5 103 aa6.31□□□□□ -1.4
PTPN2-208ENST00000589216 FAM229AH3BQW9 127 aa6.31□□□□□ -1.4
PTPN2-208ENST00000589216 INAFM2P0DMQ5 153 aa6.31□□□□□ -1.4
PTPN2-208ENST00000589216 C10orf91Q5T1B1 145 aa6.31□□□□□ -1.4
PTPN2-208ENST00000589216 CIRBPQ14011 172 aaKnown RBP6.3□□□□□ -1.4
PTPN2-208ENST00000589216 SS18Q15532 418 aa6.3□□□□□ -1.4
PTPN2-208ENST00000589216 CD164L2Q6UWJ8 174 aa6.3□□□□□ -1.4
PTPN2-208ENST00000589216 IMMP2LQ96T52 175 aa6.3□□□□□ -1.4
PTPN2-208ENST00000589216 MAP1LC3AQ9H492 121 aa6.3□□□□□ -1.4
PTPN2-208ENST00000589216 AP5S1Q9NUS5 200 aa6.3□□□□□ -1.4
PTPN2-208ENST00000589216 CARHSP1Q9Y2V2 147 aaKnown RBP6.3□□□□□ -1.4
PTPN2-208ENST00000589216 IGHV3-64A0A075B6Q5 118 aa6.29□□□□□ -1.4
PTPN2-208ENST00000589216 KIAA1644Q3SXP7 199 aa6.29□□□□□ -1.4
PTPN2-208ENST00000589216 CTDSP1Q9GZU7 261 aa6.29□□□□□ -1.4
PTPN2-208ENST00000589216 SPANXA1Q9NS26 97 aa6.29□□□□□ -1.4
PTPN2-208ENST00000589216 LAMTOR2Q9Y2Q5 125 aa6.29□□□□□ -1.4
PTPN2-208ENST00000589216 IGLV4-3A0A075B6K6 122 aa6.28□□□□□ -1.4
PTPN2-208ENST00000589216 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.28□□□□□ -1.4
PTPN2-208ENST00000589216 IGHV1-58A0A0C4DH39 117 aa6.28□□□□□ -1.4
PTPN2-208ENST00000589216 PRSS47A8MTI9 375 aa6.28□□□□□ -1.4
PTPN2-208ENST00000589216 MRPS36P82909 103 aaKnown RBP6.28□□□□□ -1.4
PTPN2-208ENST00000589216 CFAP161Q6P656 301 aa6.28□□□□□ -1.4
PTPN2-208ENST00000589216 Q8N8P6 123 aa6.28□□□□□ -1.4
PTPN2-208ENST00000589216 PRSS3P2Q8NHM4 247 aa6.28□□□□□ -1.4
PTPN2-208ENST00000589216 SPACA4Q8TDM5 124 aa6.28□□□□□ -1.4
PTPN2-208ENST00000589216 TMEM18Q96B42 140 aa6.28□□□□□ -1.4
PTPN2-208ENST00000589216 A0A096LNI7 61 aa6.27□□□□□ -1.41
PTPN2-208ENST00000589216 IFITM10A6NMD0 228 aa6.27□□□□□ -1.41
PTPN2-208ENST00000589216 C1orf196B1AJZ1 125 aa6.27□□□□□ -1.41
PTPN2-208ENST00000589216 RAB5AP20339 215 aa6.27□□□□□ -1.41
PTPN2-208ENST00000589216 COX6A2Q02221 97 aa6.27□□□□□ -1.41
PTPN2-208ENST00000589216 SMAGPQ0VAQ4 97 aa6.27□□□□□ -1.41
PTPN2-208ENST00000589216 XP32Q5T750 250 aa6.27□□□□□ -1.41
PTPN2-208ENST00000589216 ZC2HC1BQ5TFG8 222 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms