RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 CKS2P33552 79 aa12.42□□□□□ -0.42
CIRBP-221ENST00000589161 SMAGPQ0VAQ4 97 aa12.42□□□□□ -0.42
CIRBP-221ENST00000589161 MRPL54Q6P161 138 aaKnown RBP12.42□□□□□ -0.42
CIRBP-221ENST00000589161 LINC00528Q8N1L1 170 aa12.42□□□□□ -0.42
CIRBP-221ENST00000589161 CIRBP-AS1Q8TBR5 109 aa12.42□□□□□ -0.42
CIRBP-221ENST00000589161 C20orf78Q9BR46 151 aa12.42□□□□□ -0.42
CIRBP-221ENST00000589161 VPS13BQ7Z7G8 4022 aa12.41□□□□□ -0.42
CIRBP-221ENST00000589161 TRBV24-1A0A075B6N3 115 aa12.41□□□□□ -0.42
CIRBP-221ENST00000589161 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.41□□□□□ -0.42
CIRBP-221ENST00000589161 PNRC1Q12796 327 aaPredicted RBP12.41□□□□□ -0.42
CIRBP-221ENST00000589161 A0A1B0GXF2 115 aa12.4□□□□□ -0.42
CIRBP-221ENST00000589161 CDC42SE2Q9NRR3 84 aa12.4□□□□□ -0.42
CIRBP-221ENST00000589161 LINC00959A0A1B0GUT2 108 aa12.39□□□□□ -0.43
CIRBP-221ENST00000589161 TCAPO15273 167 aa12.39□□□□□ -0.43
CIRBP-221ENST00000589161 RPL32P62910 135 aaKnown RBP12.39□□□□□ -0.43
CIRBP-221ENST00000589161 CLLU1Q5K131 121 aa12.39□□□□□ -0.43
CIRBP-221ENST00000589161 SDIM1Q6ZPB5 146 aa12.39□□□□□ -0.43
CIRBP-221ENST00000589161 ATP5L2Q7Z4Y8 100 aa12.39□□□□□ -0.43
CIRBP-221ENST00000589161 ZNF664Q8N3J9 261 aa12.39□□□□□ -0.43
CIRBP-221ENST00000589161 MT-ND4LP03901 98 aa12.38□□□□□ -0.43
CIRBP-221ENST00000589161 SS18Q15532 418 aa12.38□□□□□ -0.43
CIRBP-221ENST00000589161 C15orf56Q8N910 161 aa12.38□□□□□ -0.43
CIRBP-221ENST00000589161 TMEM18Q96B42 140 aa12.38□□□□□ -0.43
CIRBP-221ENST00000589161 ANAPC16Q96DE5 110 aa12.38□□□□□ -0.43
CIRBP-221ENST00000589161 CSDC2Q9Y534 153 aaKnown RBP12.38□□□□□ -0.43
CIRBP-221ENST00000589161 IGHV3-64A0A075B6Q5 118 aa12.37□□□□□ -0.43
CIRBP-221ENST00000589161 D6R8Y8 96 aa12.37□□□□□ -0.43
CIRBP-221ENST00000589161 TNFRSF6BO95407 300 aa12.37□□□□□ -0.43
CIRBP-221ENST00000589161 PPBPP02775 128 aa12.37□□□□□ -0.43
CIRBP-221ENST00000589161 FOXI1Q12951 378 aa12.37□□□□□ -0.43
CIRBP-221ENST00000589161 SRRM2Q9UQ35 2752 aaKnown RBP12.36□□□□□ -0.43
CIRBP-221ENST00000589161 PHOX2AO14813 284 aa12.36□□□□□ -0.43
CIRBP-221ENST00000589161 CCL25O15444 150 aa12.36□□□□□ -0.43
CIRBP-221ENST00000589161 SLPIP03973 132 aa12.36□□□□□ -0.43
CIRBP-221ENST00000589161 XCL1P47992 114 aa12.36□□□□□ -0.43
CIRBP-221ENST00000589161 UBE2D4Q9Y2X8 147 aa12.35□□□□□ -0.43
CIRBP-221ENST00000589161 HIGD2BQ4VC39 106 aa12.34□□□□□ -0.43
CIRBP-221ENST00000589161 CD164L2Q6UWJ8 174 aa12.34□□□□□ -0.43
CIRBP-221ENST00000589161 TIMM21Q9BVV7 248 aa12.34□□□□□ -0.43
CIRBP-221ENST00000589161 SMIM2Q9BVW6 85 aa12.34□□□□□ -0.43
CIRBP-221ENST00000589161 GVQW2A0A096LPI5 108 aaPredicted RBP12.33□□□□□ -0.44
CIRBP-221ENST00000589161 ORMDL3Q8N138 153 aa12.33□□□□□ -0.44
CIRBP-221ENST00000589161 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.33□□□□□ -0.44
CIRBP-221ENST00000589161 IGHV1-58A0A0C4DH39 117 aa12.32□□□□□ -0.44
CIRBP-221ENST00000589161 C1orf196B1AJZ1 125 aa12.32□□□□□ -0.44
CIRBP-221ENST00000589161 NPYP01303 97 aa12.32□□□□□ -0.44
CIRBP-221ENST00000589161 TMEM136Q6ZRR5 245 aa12.32□□□□□ -0.44
CIRBP-221ENST00000589161 UQCC3Q6UW78 93 aa12.31□□□□□ -0.44
CIRBP-221ENST00000589161 DPH3Q96FX2 82 aa12.31□□□□□ -0.44
CIRBP-221ENST00000589161 PANO1I0J062 215 aa12.3□□□□□ -0.44
CIRBP-221ENST00000589161 CIRBPQ14011 172 aaKnown RBP12.3□□□□□ -0.44
CIRBP-221ENST00000589161 PRELID3AQ96N28 172 aa12.3□□□□□ -0.44
CIRBP-221ENST00000589161 IFITM2Q01629 132 aa12.29□□□□□ -0.44
CIRBP-221ENST00000589161 RAB5AP20339 215 aa12.28□□□□□ -0.44
CIRBP-221ENST00000589161 SPANXA1Q9NS26 97 aa12.28□□□□□ -0.44
CIRBP-221ENST00000589161 LAMTOR2Q9Y2Q5 125 aa12.28□□□□□ -0.44
CIRBP-221ENST00000589161 FLG2Q5D862 2391 aaPredicted RBP12.27□□□□□ -0.44
CIRBP-221ENST00000589161 TRAV13-1A0A0B4J241 112 aa12.27□□□□□ -0.45
CIRBP-221ENST00000589161 RPL39P62891 51 aaKnown RBP12.27□□□□□ -0.45
CIRBP-221ENST00000589161 RNASE13Q5GAN3 156 aaKnown RBP12.27□□□□□ -0.45
CIRBP-221ENST00000589161 Q6ZUT4 128 aa12.27□□□□□ -0.45
CIRBP-221ENST00000589161 TMEM218A2RU14 115 aa12.26□□□□□ -0.45
CIRBP-221ENST00000589161 PRSS47A8MTI9 375 aa12.26□□□□□ -0.45
CIRBP-221ENST00000589161 ZNF561-AS1K7EIQ3 104 aa12.26□□□□□ -0.45
CIRBP-221ENST00000589161 COX7A2LO14548 114 aa12.26□□□□□ -0.45
CIRBP-221ENST00000589161 MALP21145 153 aa12.26□□□□□ -0.45
CIRBP-221ENST00000589161 COX6A2Q02221 97 aa12.26□□□□□ -0.45
CIRBP-221ENST00000589161 IMMP2LQ96T52 175 aa12.26□□□□□ -0.45
CIRBP-221ENST00000589161 KRTAP10-4P60372 401 aaPredicted RBP12.25□□□□□ -0.45
CIRBP-221ENST00000589161 RPL37AP61513 92 aaKnown RBP12.25□□□□□ -0.45
CIRBP-221ENST00000589161 SPACA4Q8TDM5 124 aa12.25□□□□□ -0.45
CIRBP-221ENST00000589161 PKIGQ9Y2B9 76 aa12.25□□□□□ -0.45
CIRBP-221ENST00000589161 CHTF8P0CG12 524 aa12.24□□□□□ -0.45
CIRBP-221ENST00000589161 MRPS36P82909 103 aaKnown RBP12.24□□□□□ -0.45
CIRBP-221ENST00000589161 MAP1LC3AQ9H492 121 aa12.24□□□□□ -0.45
CIRBP-221ENST00000589161 A0A087WYN8 130 aa12.23□□□□□ -0.45
CIRBP-221ENST00000589161 PRSS3P2Q8NHM4 247 aa12.23□□□□□ -0.45
CIRBP-221ENST00000589161 CTDSP1Q9GZU7 261 aa12.23□□□□□ -0.45
CIRBP-221ENST00000589161 LOC389332A0A1B0GUA5 103 aa12.22□□□□□ -0.45
CIRBP-221ENST00000589161 ADCYAP1P18509 176 aa12.22□□□□□ -0.45
CIRBP-221ENST00000589161 LINC00526Q96FQ7 95 aa12.22□□□□□ -0.45
CIRBP-221ENST00000589161 CARD19Q96LW7 228 aa12.22□□□□□ -0.45
CIRBP-221ENST00000589161 MYCBP2O75592 4640 aa12.22□□□□□ -0.45
CIRBP-221ENST00000589161 APOMO95445 188 aa12.21□□□□□ -0.45
CIRBP-221ENST00000589161 IFI27P40305 119 aaPredicted RBP12.21□□□□□ -0.45
CIRBP-221ENST00000589161 SYCNQ0VAF6 134 aa12.21□□□□□ -0.45
CIRBP-221ENST00000589161 FAM104AQ969W3 186 aa12.21□□□□□ -0.45
CIRBP-221ENST00000589161 SEC11CQ9BY50 192 aa12.21□□□□□ -0.45
CIRBP-221ENST00000589161 PLAC8Q9NZF1 115 aa12.21□□□□□ -0.45
CIRBP-221ENST00000589161 DMBT1Q9UGM3 2413 aaPredicted RBP12.21□□□□□ -0.46
CIRBP-221ENST00000589161 J3QL48 77 aa12.2□□□□□ -0.46
CIRBP-221ENST00000589161 MAJINQ3KP22 176 aa12.2□□□□□ -0.46
CIRBP-221ENST00000589161 C5orf38Q86SI9 138 aa12.2□□□□□ -0.46
CIRBP-221ENST00000589161 OPRPNQ99935 248 aaPredicted RBP12.2□□□□□ -0.46
CIRBP-221ENST00000589161 LINC00474Q9P2X8 69 aa12.2□□□□□ -0.46
CIRBP-221ENST00000589161 PYGO1Q9Y3Y4 419 aa12.2□□□□□ -0.46
CIRBP-221ENST00000589161 TRAV9-1A0A075B6T8 112 aa12.19□□□□□ -0.46
CIRBP-221ENST00000589161 IGKV2-24A0A0C4DH68 120 aa12.19□□□□□ -0.46
CIRBP-221ENST00000589161 Q8N8P6 123 aa12.19□□□□□ -0.46
CIRBP-221ENST00000589161 IGLV4-69A0A075B6H9 119 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms