RNA–Protein interactions for RNA: ENST00000588879.5

RANBP3-215, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-215ENST00000588879 HBBP68871 147 aa11.87□□□□□ -0.51
RANBP3-215ENST00000588879 C15orf56Q8N910 161 aa11.87□□□□□ -0.51
RANBP3-215ENST00000588879 C20orf78Q9BR46 151 aa11.87□□□□□ -0.51
RANBP3-215ENST00000588879 IGKV3OR2-268A0A0C4DH90 116 aa11.86□□□□□ -0.51
RANBP3-215ENST00000588879 PLA2G1BP04054 148 aaKnown RBP11.86□□□□□ -0.51
RANBP3-215ENST00000588879 CFAP161Q6P656 301 aa11.86□□□□□ -0.51
RANBP3-215ENST00000588879 SDIM1Q6ZPB5 146 aa11.86□□□□□ -0.51
RANBP3-215ENST00000588879 CDC42SE2Q9NRR3 84 aa11.86□□□□□ -0.51
RANBP3-215ENST00000588879 F8W036 122 aa11.85□□□□□ -0.51
RANBP3-215ENST00000588879 SLPIP03973 132 aa11.85□□□□□ -0.51
RANBP3-215ENST00000588879 FCER1GP30273 86 aa11.85□□□□□ -0.51
RANBP3-215ENST00000588879 PNRC1Q12796 327 aaPredicted RBP11.85□□□□□ -0.51
RANBP3-215ENST00000588879 FOXI1Q12951 378 aa11.85□□□□□ -0.51
RANBP3-215ENST00000588879 CLLU1Q5K131 121 aa11.85□□□□□ -0.51
RANBP3-215ENST00000588879 MRPL54Q6P161 138 aaKnown RBP11.85□□□□□ -0.51
RANBP3-215ENST00000588879 ATP5L2Q7Z4Y8 100 aa11.85□□□□□ -0.51
RANBP3-215ENST00000588879 KIR2DL4Q99706 377 aa11.85□□□□□ -0.51
RANBP3-215ENST00000588879 AP5S1Q9NUS5 200 aa11.85□□□□□ -0.51
RANBP3-215ENST00000588879 CSDC2Q9Y534 153 aaKnown RBP11.85□□□□□ -0.51
RANBP3-215ENST00000588879 LINC00959A0A1B0GUT2 108 aa11.84□□□□□ -0.51
RANBP3-215ENST00000588879 CKS2P33552 79 aa11.84□□□□□ -0.51
RANBP3-215ENST00000588879 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.83□□□□□ -0.52
RANBP3-215ENST00000588879 ZNF664Q8N3J9 261 aa11.83□□□□□ -0.52
RANBP3-215ENST00000588879 TCAPO15273 167 aa11.82□□□□□ -0.52
RANBP3-215ENST00000588879 TNFRSF6BO95407 300 aa11.82□□□□□ -0.52
RANBP3-215ENST00000588879 SMAGPQ0VAQ4 97 aa11.82□□□□□ -0.52
RANBP3-215ENST00000588879 CIRBPQ14011 172 aaKnown RBP11.82□□□□□ -0.52
RANBP3-215ENST00000588879 UBE2D4Q9Y2X8 147 aa11.82□□□□□ -0.52
RANBP3-215ENST00000588879 GVQW2A0A096LPI5 108 aaPredicted RBP11.81□□□□□ -0.52
RANBP3-215ENST00000588879 D6R8Y8 96 aa11.81□□□□□ -0.52
RANBP3-215ENST00000588879 PHOX2AO14813 284 aa11.81□□□□□ -0.52
RANBP3-215ENST00000588879 PPBPP02775 128 aa11.81□□□□□ -0.52
RANBP3-215ENST00000588879 ANAPC16Q96DE5 110 aa11.81□□□□□ -0.52
RANBP3-215ENST00000588879 TIMM21Q9BVV7 248 aa11.81□□□□□ -0.52
RANBP3-215ENST00000588879 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.81□□□□□ -0.52
RANBP3-215ENST00000588879 IGHV3-64A0A075B6Q5 118 aa11.8□□□□□ -0.52
RANBP3-215ENST00000588879 CCL25O15444 150 aa11.8□□□□□ -0.52
RANBP3-215ENST00000588879 MT-ND4LP03901 98 aa11.8□□□□□ -0.52
RANBP3-215ENST00000588879 XCL1P47992 114 aa11.8□□□□□ -0.52
RANBP3-215ENST00000588879 KRTAP10-4P60372 401 aaPredicted RBP11.8□□□□□ -0.52
RANBP3-215ENST00000588879 SMIM2Q9BVW6 85 aa11.8□□□□□ -0.52
RANBP3-215ENST00000588879 HERC1Q15751 4861 aa11.79□□□□□ -0.52
RANBP3-215ENST00000588879 PANO1I0J062 215 aa11.79□□□□□ -0.52
RANBP3-215ENST00000588879 SS18Q15532 418 aa11.79□□□□□ -0.52
RANBP3-215ENST00000588879 TMEM18Q96B42 140 aa11.79□□□□□ -0.52
RANBP3-215ENST00000588879 FLG2Q5D862 2391 aaPredicted RBP11.79□□□□□ -0.52
RANBP3-215ENST00000588879 NPYP01303 97 aa11.78□□□□□ -0.52
RANBP3-215ENST00000588879 IFITM2Q01629 132 aa11.78□□□□□ -0.52
RANBP3-215ENST00000588879 CD164L2Q6UWJ8 174 aa11.78□□□□□ -0.52
RANBP3-215ENST00000588879 HIGD2BQ4VC39 106 aa11.77□□□□□ -0.53
RANBP3-215ENST00000588879 ORMDL3Q8N138 153 aa11.77□□□□□ -0.53
RANBP3-215ENST00000588879 IGHV1-58A0A0C4DH39 117 aa11.76□□□□□ -0.53
RANBP3-215ENST00000588879 UQCC3Q6UW78 93 aa11.76□□□□□ -0.53
RANBP3-215ENST00000588879 DMBT1Q9UGM3 2413 aaPredicted RBP11.76□□□□□ -0.53
RANBP3-215ENST00000588879 C1orf196B1AJZ1 125 aa11.75□□□□□ -0.53
RANBP3-215ENST00000588879 TMEM136Q6ZRR5 245 aa11.75□□□□□ -0.53
RANBP3-215ENST00000588879 PRSS47A8MTI9 375 aa11.74□□□□□ -0.53
RANBP3-215ENST00000588879 SPACA4Q8TDM5 124 aa11.74□□□□□ -0.53
RANBP3-215ENST00000588879 FAM104AQ969W3 186 aa11.74□□□□□ -0.53
RANBP3-215ENST00000588879 PRELID3AQ96N28 172 aa11.74□□□□□ -0.53
RANBP3-215ENST00000588879 LAMTOR2Q9Y2Q5 125 aa11.74□□□□□ -0.53
RANBP3-215ENST00000588879 PKHD1L1Q86WI1 4243 aa11.73□□□□□ -0.53
RANBP3-215ENST00000588879 RPL39P62891 51 aaKnown RBP11.73□□□□□ -0.53
RANBP3-215ENST00000588879 Q6ZUT4 128 aa11.73□□□□□ -0.53
RANBP3-215ENST00000588879 SPANXA1Q9NS26 97 aa11.73□□□□□ -0.53
RANBP3-215ENST00000588879 ADCYAP1P18509 176 aa11.72□□□□□ -0.53
RANBP3-215ENST00000588879 RNASE13Q5GAN3 156 aaKnown RBP11.72□□□□□ -0.53
RANBP3-215ENST00000588879 IMMP2LQ96T52 175 aa11.72□□□□□ -0.53
RANBP3-215ENST00000588879 TMEM218A2RU14 115 aa11.71□□□□□ -0.53
RANBP3-215ENST00000588879 CHTF8P0CG12 524 aa11.71□□□□□ -0.53
RANBP3-215ENST00000588879 MRPS36P82909 103 aaKnown RBP11.71□□□□□ -0.53
RANBP3-215ENST00000588879 COX6A2Q02221 97 aa11.71□□□□□ -0.53
RANBP3-215ENST00000588879 TRAV13-1A0A0B4J241 112 aa11.7□□□□□ -0.54
RANBP3-215ENST00000588879 COX7A2LO14548 114 aa11.7□□□□□ -0.54
RANBP3-215ENST00000588879 PLAC8Q9NZF1 115 aa11.7□□□□□ -0.54
RANBP3-215ENST00000588879 A0A087WYN8 130 aa11.69□□□□□ -0.54
RANBP3-215ENST00000588879 RPL37AP61513 92 aaKnown RBP11.69□□□□□ -0.54
RANBP3-215ENST00000588879 PRSS3P2Q8NHM4 247 aa11.69□□□□□ -0.54
RANBP3-215ENST00000588879 KRTAP29-1A8MX34 341 aaPredicted RBP11.68□□□□□ -0.54
RANBP3-215ENST00000588879 ZNF561-AS1K7EIQ3 104 aa11.68□□□□□ -0.54
RANBP3-215ENST00000588879 RAB5AP20339 215 aa11.68□□□□□ -0.54
RANBP3-215ENST00000588879 CTDSP1Q9GZU7 261 aa11.68□□□□□ -0.54
RANBP3-215ENST00000588879 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
RANBP3-215ENST00000588879 FAT3Q8TDW7 4589 aa11.67□□□□□ -0.54
RANBP3-215ENST00000588879 MALP21145 153 aa11.67□□□□□ -0.54
RANBP3-215ENST00000588879 LINC00526Q96FQ7 95 aa11.67□□□□□ -0.54
RANBP3-215ENST00000588879 CARD19Q96LW7 228 aa11.67□□□□□ -0.54
RANBP3-215ENST00000588879 SEC11CQ9BY50 192 aa11.67□□□□□ -0.54
RANBP3-215ENST00000588879 MAP1LC3AQ9H492 121 aa11.67□□□□□ -0.54
RANBP3-215ENST00000588879 PKIGQ9Y2B9 76 aa11.67□□□□□ -0.54
RANBP3-215ENST00000588879 LRP1Q07954 4544 aaKnown RBP11.67□□□□□ -0.54
RANBP3-215ENST00000588879 SYCNQ0VAF6 134 aa11.66□□□□□ -0.54
RANBP3-215ENST00000588879 Q8N8P6 123 aa11.66□□□□□ -0.54
RANBP3-215ENST00000588879 DPH3Q96FX2 82 aa11.66□□□□□ -0.54
RANBP3-215ENST00000588879 OPRPNQ99935 248 aaPredicted RBP11.66□□□□□ -0.54
RANBP3-215ENST00000588879 TRAV9-1A0A075B6T8 112 aa11.65□□□□□ -0.54
RANBP3-215ENST00000588879 IGLV4-69A0A075B6H9 119 aa11.64□□□□□ -0.55
RANBP3-215ENST00000588879 A0A096LNI7 61 aa11.64□□□□□ -0.55
RANBP3-215ENST00000588879 IGHV3OR16-9A0A0B4J2B5 98 aa11.64□□□□□ -0.55
RANBP3-215ENST00000588879 LOC389332A0A1B0GUA5 103 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms