RNA–Protein interactions for RNA: ENST00000588260.1

AC003043.1-201, humanhuman

TSL 3 BASIC

Gene AC003043.1, Length 337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003043.1-201ENST00000588260 IGKV2-29A2NJV5 120 aaPredicted RBP9.12□□□□□ -0.95
AC003043.1-201ENST00000588260 VCYO14598 125 aa9.12□□□□□ -0.95
AC003043.1-201ENST00000588260 FCER1GP30273 86 aa9.12□□□□□ -0.95
AC003043.1-201ENST00000588260 CKS2P33552 79 aa9.12□□□□□ -0.95
AC003043.1-201ENST00000588260 POLR2KP53803 58 aaKnown RBP9.12□□□□□ -0.95
AC003043.1-201ENST00000588260 KRTAP10-1P60331 282 aa9.12□□□□□ -0.95
AC003043.1-201ENST00000588260 ATP5L2Q7Z4Y8 100 aa9.12□□□□□ -0.95
AC003043.1-201ENST00000588260 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
AC003043.1-201ENST00000588260 A0A1B0GXF2 115 aa9.11□□□□□ -0.95
AC003043.1-201ENST00000588260 TSHBP01222 138 aa9.11□□□□□ -0.95
AC003043.1-201ENST00000588260 FGF6P10767 208 aa9.11□□□□□ -0.95
AC003043.1-201ENST00000588260 SUMO2P61956 95 aaKnown RBP9.11□□□□□ -0.95
AC003043.1-201ENST00000588260 NRACQ8N912 160 aa9.11□□□□□ -0.95
AC003043.1-201ENST00000588260 TMEM101Q96IK0 257 aa9.11□□□□□ -0.95
AC003043.1-201ENST00000588260 BTF3L4Q96K17 158 aa9.11□□□□□ -0.95
AC003043.1-201ENST00000588260 KIR2DL4Q99706 377 aa9.11□□□□□ -0.95
AC003043.1-201ENST00000588260 ZNF25P17030 456 aaPredicted RBP9.1□□□□□ -0.95
AC003043.1-201ENST00000588260 S100A2P29034 98 aa9.1□□□□□ -0.95
AC003043.1-201ENST00000588260 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
AC003043.1-201ENST00000588260 USP17L23D6RBM5 183 aa9.09□□□□□ -0.95
AC003043.1-201ENST00000588260 C20orf78Q9BR46 151 aa9.09□□□□□ -0.95
AC003043.1-201ENST00000588260 RYR1P21817 5038 aa9.09□□□□□ -0.95
AC003043.1-201ENST00000588260 TRBV24-1A0A075B6N3 115 aa9.08□□□□□ -0.96
AC003043.1-201ENST00000588260 D6R8Y8 96 aa9.08□□□□□ -0.96
AC003043.1-201ENST00000588260 PPBPP02775 128 aa9.08□□□□□ -0.96
AC003043.1-201ENST00000588260 ESDP10768 282 aa9.08□□□□□ -0.96
AC003043.1-201ENST00000588260 SMAGPQ0VAQ4 97 aa9.08□□□□□ -0.96
AC003043.1-201ENST00000588260 OR5A1Q8NGJ0 315 aa9.08□□□□□ -0.96
AC003043.1-201ENST00000588260 LRP1BQ9NZR2 4599 aa9.07□□□□□ -0.96
AC003043.1-201ENST00000588260 TCAPO15273 167 aa9.07□□□□□ -0.96
AC003043.1-201ENST00000588260 TNFRSF6BO95407 300 aa9.07□□□□□ -0.96
AC003043.1-201ENST00000588260 DGAT2L7PQ6IED9 249 aa9.07□□□□□ -0.96
AC003043.1-201ENST00000588260 DNAH5Q8TE73 4624 aa9.06□□□□□ -0.96
AC003043.1-201ENST00000588260 RPL32P62910 135 aaKnown RBP9.06□□□□□ -0.96
AC003043.1-201ENST00000588260 KRTAP26-1Q6PEX3 210 aa9.06□□□□□ -0.96
AC003043.1-201ENST00000588260 ORMDL3Q8N138 153 aa9.06□□□□□ -0.96
AC003043.1-201ENST00000588260 TMEM18Q96B42 140 aa9.06□□□□□ -0.96
AC003043.1-201ENST00000588260 PHOX2AO14813 284 aa9.05□□□□□ -0.96
AC003043.1-201ENST00000588260 TMEM136Q6ZRR5 245 aa9.05□□□□□ -0.96
AC003043.1-201ENST00000588260 MRPL52Q86TS9 123 aaKnown RBP9.05□□□□□ -0.96
AC003043.1-201ENST00000588260 Q8N1X5 172 aa9.05□□□□□ -0.96
AC003043.1-201ENST00000588260 PRELID3AQ96N28 172 aa9.05□□□□□ -0.96
AC003043.1-201ENST00000588260 IMMP2LQ96T52 175 aa9.05□□□□□ -0.96
AC003043.1-201ENST00000588260 SMIM2Q9BVW6 85 aa9.05□□□□□ -0.96
AC003043.1-201ENST00000588260 GAGE12HA6NDE8 117 aa9.04□□□□□ -0.96
AC003043.1-201ENST00000588260 NPYP01303 97 aa9.04□□□□□ -0.96
AC003043.1-201ENST00000588260 CHCHD10Q8WYQ3 142 aaPredicted RBP9.04□□□□□ -0.96
AC003043.1-201ENST00000588260 PRSS1P07477 247 aa9.03□□□□□ -0.96
AC003043.1-201ENST00000588260 XGP55808 180 aa9.03□□□□□ -0.96
AC003043.1-201ENST00000588260 LINC01620Q4KN68 170 aa9.03□□□□□ -0.96
AC003043.1-201ENST00000588260 ZNF664Q8N3J9 261 aa9.03□□□□□ -0.96
AC003043.1-201ENST00000588260 hDV102S1A0JD36 115 aa9.02□□□□□ -0.97
AC003043.1-201ENST00000588260 SS18Q15532 418 aa9.02□□□□□ -0.97
AC003043.1-201ENST00000588260 LBHQ53QV2 105 aaPredicted RBP9.02□□□□□ -0.97
AC003043.1-201ENST00000588260 CFAP161Q6P656 301 aa9.02□□□□□ -0.97
AC003043.1-201ENST00000588260 CDC42SE2Q9NRR3 84 aa9.02□□□□□ -0.97
AC003043.1-201ENST00000588260 AP5S1Q9NUS5 200 aa9.02□□□□□ -0.97
AC003043.1-201ENST00000588260 LAMTOR2Q9Y2Q5 125 aa9.02□□□□□ -0.97
AC003043.1-201ENST00000588260 HSPG2P98160 4391 aa9.01□□□□□ -0.97
AC003043.1-201ENST00000588260 TRAV9-1A0A075B6T8 112 aa9.01□□□□□ -0.97
AC003043.1-201ENST00000588260 COA6Q5JTJ3 125 aaKnown RBP9.01□□□□□ -0.97
AC003043.1-201ENST00000588260 UBE2D4Q9Y2X8 147 aa9.01□□□□□ -0.97
AC003043.1-201ENST00000588260 CSDC2Q9Y534 153 aaKnown RBP9.01□□□□□ -0.97
AC003043.1-201ENST00000588260 LINC00959A0A1B0GUT2 108 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 LINC00587B1AMM8 73 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 J3QL48 77 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 HIST1H2BKO60814 126 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 HIST1H2BJP06899 126 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 HIST1H2BOP23527 126 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 HIST1H2BBP33778 126 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 XCL1P47992 114 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 NDUFA6P56556 154 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 HIST1H2BDP58876 126 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 HIST1H2BCP62807 126 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 HAMPP81172 84 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 HIST2H2BEQ16778 126 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 HIST2H2BFQ5QNW6 126 aaPredicted RBP9□□□□□ -0.97
AC003043.1-201ENST00000588260 HIST1H2BHQ93079 126 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 HIST1H2BNQ99877 126 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 HIST1H2BMQ99879 126 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 TIMM21Q9BVV7 248 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 MAP1LC3AQ9H492 121 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 FAM30AQ9NZY2 134 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 PCLOQ9Y6V0 5065 aa9□□□□□ -0.97
AC003043.1-201ENST00000588260 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
AC003043.1-201ENST00000588260 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.99□□□□□ -0.97
AC003043.1-201ENST00000588260 EPM2AB3EWF7 344 aa8.99□□□□□ -0.97
AC003043.1-201ENST00000588260 CCL25O15444 150 aa8.99□□□□□ -0.97
AC003043.1-201ENST00000588260 Q6ZSA8 131 aa8.99□□□□□ -0.97
AC003043.1-201ENST00000588260 HIST3H2BBQ8N257 126 aa8.99□□□□□ -0.97
AC003043.1-201ENST00000588260 LOC389332A0A1B0GUA5 103 aa8.98□□□□□ -0.97
AC003043.1-201ENST00000588260 TSTD3H0UI37 97 aa8.98□□□□□ -0.97
AC003043.1-201ENST00000588260 RPL39P62891 51 aaKnown RBP8.98□□□□□ -0.97
AC003043.1-201ENST00000588260 KRTAP4-5Q9BYR2 181 aa8.98□□□□□ -0.97
AC003043.1-201ENST00000588260 SPANXA1Q9NS26 97 aa8.98□□□□□ -0.97
AC003043.1-201ENST00000588260 SMR3BP02814 79 aaPredicted RBP8.97□□□□□ -0.97
AC003043.1-201ENST00000588260 TRGC2P03986 189 aa8.97□□□□□ -0.97
AC003043.1-201ENST00000588260 CNBPP62633 177 aaKnown RBP8.97□□□□□ -0.97
AC003043.1-201ENST00000588260 FOXI1Q12951 378 aa8.97□□□□□ -0.97
AC003043.1-201ENST00000588260 RNASE13Q5GAN3 156 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms