RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 SUMO2P61956 95 aaKnown RBP12.85□□□□□ -0.35
TRAPPC6A-203ENST00000587818 LINC00959A0A1B0GUT2 108 aa12.84□□□□□ -0.35
TRAPPC6A-203ENST00000587818 FCER1GP30273 86 aa12.84□□□□□ -0.35
TRAPPC6A-203ENST00000587818 XCL1P47992 114 aa12.84□□□□□ -0.35
TRAPPC6A-203ENST00000587818 CFAP161Q6P656 301 aa12.84□□□□□ -0.35
TRAPPC6A-203ENST00000587818 CDC42SE2Q9NRR3 84 aa12.84□□□□□ -0.35
TRAPPC6A-203ENST00000587818 C7orf77A4D0Y5 90 aa12.83□□□□□ -0.36
TRAPPC6A-203ENST00000587818 CCL25O15444 150 aa12.83□□□□□ -0.36
TRAPPC6A-203ENST00000587818 KRTAP10-4P60372 401 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6A-203ENST00000587818 FOXI1Q12951 378 aa12.83□□□□□ -0.36
TRAPPC6A-203ENST00000587818 ZNF664Q8N3J9 261 aa12.83□□□□□ -0.36
TRAPPC6A-203ENST00000587818 IGHV3-64A0A075B6Q5 118 aa12.82□□□□□ -0.36
TRAPPC6A-203ENST00000587818 PPP1R17O96001 155 aa12.82□□□□□ -0.36
TRAPPC6A-203ENST00000587818 CHTF8P0CG12 524 aa12.82□□□□□ -0.36
TRAPPC6A-203ENST00000587818 CKS2P33552 79 aa12.82□□□□□ -0.36
TRAPPC6A-203ENST00000587818 MRPL52Q86TS9 123 aaKnown RBP12.82□□□□□ -0.36
TRAPPC6A-203ENST00000587818 DPH3Q96FX2 82 aa12.82□□□□□ -0.36
TRAPPC6A-203ENST00000587818 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC6A-203ENST00000587818 A0A1B0GW15 77 aa12.8□□□□□ -0.36
TRAPPC6A-203ENST00000587818 RNASE13Q5GAN3 156 aaKnown RBP12.8□□□□□ -0.36
TRAPPC6A-203ENST00000587818 LINC00526Q96FQ7 95 aa12.8□□□□□ -0.36
TRAPPC6A-203ENST00000587818 KIR2DL4Q99706 377 aa12.8□□□□□ -0.36
TRAPPC6A-203ENST00000587818 DMBT1Q9UGM3 2413 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC6A-203ENST00000587818 A0A1B0GXF2 115 aa12.79□□□□□ -0.36
TRAPPC6A-203ENST00000587818 LINC00862A6NCI5 91 aa12.79□□□□□ -0.36
TRAPPC6A-203ENST00000587818 TNFRSF6BO95407 300 aa12.79□□□□□ -0.36
TRAPPC6A-203ENST00000587818 RAB14P61106 215 aa12.79□□□□□ -0.36
TRAPPC6A-203ENST00000587818 HBBP68871 147 aa12.79□□□□□ -0.36
TRAPPC6A-203ENST00000587818 SS18Q15532 418 aa12.79□□□□□ -0.36
TRAPPC6A-203ENST00000587818 D6R8Y8 96 aa12.78□□□□□ -0.36
TRAPPC6A-203ENST00000587818 PPP1R2P9O14990 202 aa12.78□□□□□ -0.36
TRAPPC6A-203ENST00000587818 UBE2D4Q9Y2X8 147 aa12.78□□□□□ -0.36
TRAPPC6A-203ENST00000587818 TRBV24-1A0A075B6N3 115 aa12.77□□□□□ -0.37
TRAPPC6A-203ENST00000587818 NPYP01303 97 aa12.77□□□□□ -0.37
TRAPPC6A-203ENST00000587818 COX6A2Q02221 97 aa12.77□□□□□ -0.37
TRAPPC6A-203ENST00000587818 PRSS3P2Q8NHM4 247 aa12.77□□□□□ -0.37
TRAPPC6A-203ENST00000587818 C20orf78Q9BR46 151 aa12.77□□□□□ -0.37
TRAPPC6A-203ENST00000587818 PKHD1L1Q86WI1 4243 aa12.77□□□□□ -0.37
TRAPPC6A-203ENST00000587818 F8W036 122 aa12.76□□□□□ -0.37
TRAPPC6A-203ENST00000587818 S100A8P05109 93 aa12.76□□□□□ -0.37
TRAPPC6A-203ENST00000587818 RPL37AP61513 92 aaKnown RBP12.76□□□□□ -0.37
TRAPPC6A-203ENST00000587818 GVQW2A0A096LPI5 108 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC6A-203ENST00000587818 J3QL48 77 aa12.75□□□□□ -0.37
TRAPPC6A-203ENST00000587818 A0A087WYN8 130 aa12.74□□□□□ -0.37
TRAPPC6A-203ENST00000587818 TCAPO15273 167 aa12.74□□□□□ -0.37
TRAPPC6A-203ENST00000587818 RPL39P62891 51 aaKnown RBP12.74□□□□□ -0.37
TRAPPC6A-203ENST00000587818 CIRBPQ14011 172 aaKnown RBP12.74□□□□□ -0.37
TRAPPC6A-203ENST00000587818 CD164L2Q6UWJ8 174 aa12.74□□□□□ -0.37
TRAPPC6A-203ENST00000587818 TRAV13-1A0A0B4J241 112 aa12.73□□□□□ -0.37
TRAPPC6A-203ENST00000587818 IGHV1-58A0A0C4DH39 117 aa12.73□□□□□ -0.37
TRAPPC6A-203ENST00000587818 TMEM136Q6ZRR5 245 aa12.73□□□□□ -0.37
TRAPPC6A-203ENST00000587818 Q6ZUT4 128 aa12.73□□□□□ -0.37
TRAPPC6A-203ENST00000587818 OPRPNQ99935 248 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC6A-203ENST00000587818 SMIM2Q9BVW6 85 aa12.73□□□□□ -0.37
TRAPPC6A-203ENST00000587818 CSDC2Q9Y534 153 aaKnown RBP12.73□□□□□ -0.37
TRAPPC6A-203ENST00000587818 IGKV2-24A0A0C4DH68 120 aa12.72□□□□□ -0.37
TRAPPC6A-203ENST00000587818 HNRNPA3P51991 378 aaKnown RBP12.72□□□□□ -0.37
TRAPPC6A-203ENST00000587818 RPL32P62910 135 aaKnown RBP12.72□□□□□ -0.37
TRAPPC6A-203ENST00000587818 SPACA4Q8TDM5 124 aa12.72□□□□□ -0.37
TRAPPC6A-203ENST00000587818 C1orf196B1AJZ1 125 aa12.71□□□□□ -0.37
TRAPPC6A-203ENST00000587818 MT-ND4LP03901 98 aa12.71□□□□□ -0.37
TRAPPC6A-203ENST00000587818 SMAGPQ0VAQ4 97 aa12.71□□□□□ -0.37
TRAPPC6A-203ENST00000587818 CLLU1Q5K131 121 aa12.71□□□□□ -0.37
TRAPPC6A-203ENST00000587818 TMEM18Q96B42 140 aa12.71□□□□□ -0.37
TRAPPC6A-203ENST00000587818 LRP1Q07954 4544 aaKnown RBP12.71□□□□□ -0.38
TRAPPC6A-203ENST00000587818 PNRC1Q12796 327 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC6A-203ENST00000587818 MAJINQ3KP22 176 aa12.7□□□□□ -0.38
TRAPPC6A-203ENST00000587818 ATP5L2Q7Z4Y8 100 aa12.7□□□□□ -0.38
TRAPPC6A-203ENST00000587818 FAM104AQ969W3 186 aa12.7□□□□□ -0.38
TRAPPC6A-203ENST00000587818 ANAPC16Q96DE5 110 aa12.7□□□□□ -0.38
TRAPPC6A-203ENST00000587818 PRELID3AQ96N28 172 aa12.7□□□□□ -0.38
TRAPPC6A-203ENST00000587818 TIMM21Q9BVV7 248 aa12.7□□□□□ -0.38
TRAPPC6A-203ENST00000587818 FAT3Q8TDW7 4589 aa12.7□□□□□ -0.38
TRAPPC6A-203ENST00000587818 KRTAP29-1A8MX34 341 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC6A-203ENST00000587818 PPBPP02775 128 aa12.69□□□□□ -0.38
TRAPPC6A-203ENST00000587818 IFITM2Q01629 132 aa12.69□□□□□ -0.38
TRAPPC6A-203ENST00000587818 C5orf38Q86SI9 138 aa12.69□□□□□ -0.38
TRAPPC6A-203ENST00000587818 ORMDL3Q8N138 153 aa12.69□□□□□ -0.38
TRAPPC6A-203ENST00000587818 LOC389332A0A1B0GUA5 103 aa12.68□□□□□ -0.38
TRAPPC6A-203ENST00000587818 ZNF561-AS1K7EIQ3 104 aa12.68□□□□□ -0.38
TRAPPC6A-203ENST00000587818 MALP21145 153 aa12.68□□□□□ -0.38
TRAPPC6A-203ENST00000587818 A0A096LNI7 61 aa12.67□□□□□ -0.38
TRAPPC6A-203ENST00000587818 COX7A2LO14548 114 aa12.67□□□□□ -0.38
TRAPPC6A-203ENST00000587818 PHOX2AO14813 284 aa12.67□□□□□ -0.38
TRAPPC6A-203ENST00000587818 PLAC8Q9NZF1 115 aa12.67□□□□□ -0.38
TRAPPC6A-203ENST00000587818 IGLV4-69A0A075B6H9 119 aa12.66□□□□□ -0.38
TRAPPC6A-203ENST00000587818 SYCNQ0VAF6 134 aa12.66□□□□□ -0.38
TRAPPC6A-203ENST00000587818 CARD19Q96LW7 228 aa12.66□□□□□ -0.38
TRAPPC6A-203ENST00000587818 RAB5AP20339 215 aa12.65□□□□□ -0.38
TRAPPC6A-203ENST00000587818 STPG4Q8N801 248 aa12.65□□□□□ -0.38
TRAPPC6A-203ENST00000587818 ADCYAP1P18509 176 aa12.63□□□□□ -0.39
TRAPPC6A-203ENST00000587818 SPANXA1Q9NS26 97 aa12.63□□□□□ -0.39
TRAPPC6A-203ENST00000587818 Q6ZRU5 148 aa12.62□□□□□ -0.39
TRAPPC6A-203ENST00000587818 PRSS47A8MTI9 375 aa12.61□□□□□ -0.39
TRAPPC6A-203ENST00000587818 MRPS36P82909 103 aaKnown RBP12.61□□□□□ -0.39
TRAPPC6A-203ENST00000587818 MAP1LC3AQ9H492 121 aa12.61□□□□□ -0.39
TRAPPC6A-203ENST00000587818 TMEM218A2RU14 115 aa12.6□□□□□ -0.39
TRAPPC6A-203ENST00000587818 IFITM10A6NMD0 228 aa12.6□□□□□ -0.39
TRAPPC6A-203ENST00000587818 GAGE2BQ13066 116 aa12.6□□□□□ -0.39
TRAPPC6A-203ENST00000587818 CAMK2N2Q96S95 79 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms