RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 TMEM223A0PJW6 202 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 A6NJY4 79 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 K7EP34 96 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 PLEKHB2Q96CS7 222 aa18.17■□□□□ 0.5
CAPNS1-204ENST00000587718 H3BUT2 72 aa18.16■□□□□ 0.5
CAPNS1-204ENST00000587718 MRPS36P82909 103 aaKnown RBP18.16■□□□□ 0.5
CAPNS1-204ENST00000587718 NACAE9PAV3 2078 aa18.15■□□□□ 0.5
CAPNS1-204ENST00000587718 PRM2P04554 102 aa18.15■□□□□ 0.5
CAPNS1-204ENST00000587718 FABP2P12104 132 aa18.14■□□□□ 0.49
CAPNS1-204ENST00000587718 SMAGPQ0VAQ4 97 aa18.14■□□□□ 0.49
CAPNS1-204ENST00000587718 SCGB1D4Q6XE38 83 aa18.14■□□□□ 0.49
CAPNS1-204ENST00000587718 MUC7Q8TAX7 377 aa18.14■□□□□ 0.49
CAPNS1-204ENST00000587718 GIG44P09565 113 aaPredicted RBP18.13■□□□□ 0.49
CAPNS1-204ENST00000587718 ZNF22P17026 224 aaPredicted RBP18.13■□□□□ 0.49
CAPNS1-204ENST00000587718 DNAH7Q8WXX0 4024 aa18.13■□□□□ 0.49
CAPNS1-204ENST00000587718 TRGV1A0A0A0MS02 117 aa18.13■□□□□ 0.49
CAPNS1-204ENST00000587718 J3QQQ9 107 aa18.13■□□□□ 0.49
CAPNS1-204ENST00000587718 C12orf74Q32Q52 190 aa18.13■□□□□ 0.49
CAPNS1-204ENST00000587718 OVOL2Q9BRP0 275 aa18.13■□□□□ 0.49
CAPNS1-204ENST00000587718 NHP2Q9NX24 153 aaKnown RBP18.13■□□□□ 0.49
CAPNS1-204ENST00000587718 UBE2D4Q9Y2X8 147 aa18.13■□□□□ 0.49
CAPNS1-204ENST00000587718 LGALS3P17931 250 aaKnown RBP18.12■□□□□ 0.49
CAPNS1-204ENST00000587718 CASC10Q5T4H9 136 aa18.12■□□□□ 0.49
CAPNS1-204ENST00000587718 A0A0J9YY99 117 aa18.11■□□□□ 0.49
CAPNS1-204ENST00000587718 RPL36AP83881 106 aaKnown RBP18.11■□□□□ 0.49
CAPNS1-204ENST00000587718 DAZ4Q86SG3 579 aaKnown RBP18.11■□□□□ 0.49
CAPNS1-204ENST00000587718 RPL36ALQ969Q0 106 aaKnown RBP18.11■□□□□ 0.49
CAPNS1-204ENST00000587718 FAM104AQ969W3 186 aa18.11■□□□□ 0.49
CAPNS1-204ENST00000587718 DAZ3Q9NR90 486 aaKnown RBP18.11■□□□□ 0.49
CAPNS1-204ENST00000587718 TINCRA0A1B0GVN0 87 aa18.1■□□□□ 0.49
CAPNS1-204ENST00000587718 RAB37Q96AX2 223 aa18.1■□□□□ 0.49
CAPNS1-204ENST00000587718 OPRPNQ99935 248 aaPredicted RBP18.1■□□□□ 0.49
CAPNS1-204ENST00000587718 K7EQD1 137 aa18.09■□□□□ 0.49
CAPNS1-204ENST00000587718 EMP1P54849 157 aa18.09■□□□□ 0.49
CAPNS1-204ENST00000587718 SLC25A29Q8N8R3 303 aa18.09■□□□□ 0.49
CAPNS1-204ENST00000587718 CSNK1G2-AS1Q8NCQ2 148 aa18.09■□□□□ 0.49
CAPNS1-204ENST00000587718 DEFB104AQ8WTQ1 72 aa18.09■□□□□ 0.49
CAPNS1-204ENST00000587718 IGHV3OR16-12A0A075B7B8 117 aa18.08■□□□□ 0.49
CAPNS1-204ENST00000587718 CSDC2Q9Y534 153 aaKnown RBP18.08■□□□□ 0.48
CAPNS1-204ENST00000587718 A0A0J9YXV3 536 aa18.07■□□□□ 0.48
CAPNS1-204ENST00000587718 SPCS1Q9Y6A9 102 aa18.07■□□□□ 0.48
CAPNS1-204ENST00000587718 IGLL5B9A064 214 aa18.06■□□□□ 0.48
CAPNS1-204ENST00000587718 SRSF9Q13242 221 aaKnown RBP eCLIP18.06■□□□□ 0.48
CAPNS1-204ENST00000587718 RRN3P1Q2M238 152 aa18.06■□□□□ 0.48
CAPNS1-204ENST00000587718 PLAC8L1A1L4L8 177 aa18.04■□□□□ 0.48
CAPNS1-204ENST00000587718 UBE2D1P51668 147 aa18.04■□□□□ 0.48
CAPNS1-204ENST00000587718 TIRAPP58753 221 aa18.04■□□□□ 0.48
CAPNS1-204ENST00000587718 TSPEAR-AS2P59090 65 aa18.04■□□□□ 0.48
CAPNS1-204ENST00000587718 Q6ZTI0 123 aa18.04■□□□□ 0.48
CAPNS1-204ENST00000587718 GAGE12BA1L429 117 aa18.04■□□□□ 0.48
CAPNS1-204ENST00000587718 FAM19A3Q7Z5A8 133 aa18.04■□□□□ 0.48
CAPNS1-204ENST00000587718 ZNF479Q96JC4 524 aa18.04■□□□□ 0.48
CAPNS1-204ENST00000587718 GTSF1LQ9H1H1 148 aa18.04■□□□□ 0.48
CAPNS1-204ENST00000587718 TRBV6-4A0A1B0GX49 114 aa18.03■□□□□ 0.48
CAPNS1-204ENST00000587718 UBE2D3P61077 147 aa18.03■□□□□ 0.48
CAPNS1-204ENST00000587718 UBE2D2P62837 147 aa18.03■□□□□ 0.48
CAPNS1-204ENST00000587718 SPATA25Q9BR10 227 aa18.03■□□□□ 0.48
CAPNS1-204ENST00000587718 Q9UF83 564 aa18.03■□□□□ 0.48
CAPNS1-204ENST00000587718 K7ERJ3 54 aa18.01■□□□□ 0.47
CAPNS1-204ENST00000587718 NOP10Q9NPE3 64 aaKnown RBP18.01■□□□□ 0.47
CAPNS1-204ENST00000587718 IGLV5-45A0A087WSX0 123 aa18■□□□□ 0.47
CAPNS1-204ENST00000587718 H7C423 109 aa18■□□□□ 0.47
CAPNS1-204ENST00000587718 RPL35AP18077 110 aaKnown RBP18■□□□□ 0.47
CAPNS1-204ENST00000587718 DYNC2H1Q8NCM8 4307 aaKnown RBP18■□□□□ 0.47
CAPNS1-204ENST00000587718 IGHV1-58A0A0C4DH39 117 aa18■□□□□ 0.47
CAPNS1-204ENST00000587718 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.99■□□□□ 0.47
CAPNS1-204ENST00000587718 IGKV2-29A2NJV5 120 aaPredicted RBP17.99■□□□□ 0.47
CAPNS1-204ENST00000587718 IGHV3-30P01768 117 aa17.99■□□□□ 0.47
CAPNS1-204ENST00000587718 IGHV3-30-5P0DP03 117 aa17.99■□□□□ 0.47
CAPNS1-204ENST00000587718 TENM2Q9NT68 2774 aa17.98■□□□□ 0.47
CAPNS1-204ENST00000587718 DGAT2L7PQ6IED9 249 aa17.98■□□□□ 0.47
CAPNS1-204ENST00000587718 Q6ZUT4 128 aa17.98■□□□□ 0.47
CAPNS1-204ENST00000587718 SMIM9A6NGZ8 99 aa17.97■□□□□ 0.47
CAPNS1-204ENST00000587718 TMEM238C9JI98 176 aa17.97■□□□□ 0.47
CAPNS1-204ENST00000587718 WFDC10AQ9H1F0 79 aa17.97■□□□□ 0.47
CAPNS1-204ENST00000587718 CSMD3Q7Z407 3707 aa17.97■□□□□ 0.47
CAPNS1-204ENST00000587718 IGHV3-38A0A0C4DH36 116 aa17.96■□□□□ 0.47
CAPNS1-204ENST00000587718 IGHV3-30-3P0DP02 117 aa17.96■□□□□ 0.47
CAPNS1-204ENST00000587718 KIR2DL5BQ8NHK3 375 aa17.96■□□□□ 0.47
CAPNS1-204ENST00000587718 NAA38Q9BRA0 125 aaKnown RBP17.96■□□□□ 0.46
CAPNS1-204ENST00000587718 LYRM7Q5U5X0 104 aa17.95■□□□□ 0.46
CAPNS1-204ENST00000587718 CEMP1Q6PRD7 247 aaPredicted RBP17.95■□□□□ 0.46
CAPNS1-204ENST00000587718 LINC00612Q8N6U2 182 aa17.95■□□□□ 0.46
CAPNS1-204ENST00000587718 VSIG2Q96IQ7 327 aa17.95■□□□□ 0.46
CAPNS1-204ENST00000587718 GEMIN7Q9H840 131 aaKnown RBP17.95■□□□□ 0.46
CAPNS1-204ENST00000587718 RYR2Q92736 4967 aa17.94■□□□□ 0.46
CAPNS1-204ENST00000587718 TRGV2A0A075B6R0 118 aa17.94■□□□□ 0.46
CAPNS1-204ENST00000587718 HERVK_113P63121 156 aa17.94■□□□□ 0.46
CAPNS1-204ENST00000587718 ZFAND6Q6FIF0 208 aa17.94■□□□□ 0.46
CAPNS1-204ENST00000587718 STARD9Q9P2P6 4700 aa17.93■□□□□ 0.46
CAPNS1-204ENST00000587718 RETNQ9HD89 108 aa17.92■□□□□ 0.46
CAPNS1-204ENST00000587718 SACSQ9NZJ4 4579 aa17.92■□□□□ 0.46
CAPNS1-204ENST00000587718 GAGE7O76087 117 aa17.91■□□□□ 0.46
CAPNS1-204ENST00000587718 GAGE12FP0CL80 117 aa17.91■□□□□ 0.46
CAPNS1-204ENST00000587718 GAGE12GP0CL81 117 aa17.91■□□□□ 0.46
CAPNS1-204ENST00000587718 GAGE12IP0CL82 117 aa17.91■□□□□ 0.46
CAPNS1-204ENST00000587718 RPL24P83731 157 aaKnown RBP17.91■□□□□ 0.46
CAPNS1-204ENST00000587718 OCIAD2Q56VL3 154 aa17.91■□□□□ 0.46
CAPNS1-204ENST00000587718 K7ERU9 68 aa17.91■□□□□ 0.46
CAPNS1-204ENST00000587718 TIMM17BO60830 172 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms