RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 K7EQD1 137 aa5.5□□□□□ -1.53
VMP1-204ENST00000587259 MIFP14174 115 aa5.5□□□□□ -1.53
VMP1-204ENST00000587259 EMP1P54849 157 aa5.5□□□□□ -1.53
VMP1-204ENST00000587259 TCTAP57738 103 aa5.5□□□□□ -1.53
VMP1-204ENST00000587259 DAZ4Q86SG3 579 aaKnown RBP5.5□□□□□ -1.53
VMP1-204ENST00000587259 PMCHL2Q9BQD1 86 aa5.5□□□□□ -1.53
VMP1-204ENST00000587259 MIEN1Q9BRT3 115 aa5.5□□□□□ -1.53
VMP1-204ENST00000587259 NOP10Q9NPE3 64 aaKnown RBP5.5□□□□□ -1.53
VMP1-204ENST00000587259 DAZ3Q9NR90 486 aaKnown RBP5.5□□□□□ -1.53
VMP1-204ENST00000587259 TRBV7-3A0A075B6L6 115 aa5.49□□□□□ -1.53
VMP1-204ENST00000587259 A0A087WX48 190 aa5.49□□□□□ -1.53
VMP1-204ENST00000587259 TRBV6-4A0A1B0GX49 114 aa5.49□□□□□ -1.53
VMP1-204ENST00000587259 F8VRH5 84 aa5.49□□□□□ -1.53
VMP1-204ENST00000587259 DPM2O94777 84 aa5.49□□□□□ -1.53
VMP1-204ENST00000587259 CRYBA4P53673 196 aa5.49□□□□□ -1.53
VMP1-204ENST00000587259 COTL1Q14019 142 aa5.49□□□□□ -1.53
VMP1-204ENST00000587259 LBHQ53QV2 105 aaPredicted RBP5.49□□□□□ -1.53
VMP1-204ENST00000587259 TMEM97Q5BJF2 176 aa5.49□□□□□ -1.53
VMP1-204ENST00000587259 LINC00173Q6ZV60 143 aa5.49□□□□□ -1.53
VMP1-204ENST00000587259 PLAC8L1A1L4L8 177 aa5.48□□□□□ -1.53
VMP1-204ENST00000587259 IGKCP01834 107 aa5.48□□□□□ -1.53
VMP1-204ENST00000587259 HTN3P15516 51 aa5.48□□□□□ -1.53
VMP1-204ENST00000587259 ODF1Q14990 250 aa5.48□□□□□ -1.53
VMP1-204ENST00000587259 Q6ZTI0 123 aa5.48□□□□□ -1.53
VMP1-204ENST00000587259 C20orf203Q8NBC4 194 aa5.48□□□□□ -1.53
VMP1-204ENST00000587259 NEXN-AS1Q8NBZ9 246 aa5.48□□□□□ -1.53
VMP1-204ENST00000587259 PRADC1Q9BSG0 188 aa5.48□□□□□ -1.53
VMP1-204ENST00000587259 PRO1933Q9H354 126 aa5.48□□□□□ -1.53
VMP1-204ENST00000587259 SPANXA1Q9NS26 97 aa5.48□□□□□ -1.53
VMP1-204ENST00000587259 PYGO1Q9Y3Y4 419 aa5.48□□□□□ -1.53
VMP1-204ENST00000587259 HSPG2P98160 4391 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 IGHV3-73A0A0B4J1V6 119 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 TRGV4A0A0C4DH28 118 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 GAGE12BA1L429 117 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 GAGE7O76087 117 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 TSHBP01222 138 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 GAGE12FP0CL80 117 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 GAGE12GP0CL81 117 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 GAGE12IP0CL82 117 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 P0DMU3 169 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 FAM231AP0DMU4 169 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 FAM231CP0DMU5 169 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 IGLC3P0DOY3 106 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 PMVKQ15126 192 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 Q6ZR54 194 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 UBE2DNLQ8IWF7 75 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 ATOH7Q8N100 152 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 LINC00612Q8N6U2 182 aa5.47□□□□□ -1.53
VMP1-204ENST00000587259 IGIPA6NJ69 53 aa5.46□□□□□ -1.54
VMP1-204ENST00000587259 H7C423 109 aa5.46□□□□□ -1.54
VMP1-204ENST00000587259 PRM2P04554 102 aa5.46□□□□□ -1.54
VMP1-204ENST00000587259 HNRNPA3P51991 378 aaKnown RBP5.46□□□□□ -1.54
VMP1-204ENST00000587259 HERVK_113P61574 105 aa5.46□□□□□ -1.54
VMP1-204ENST00000587259 SLC25A34Q6PIV7 304 aa5.46□□□□□ -1.54
VMP1-204ENST00000587259 MAPKAPK5-AS1Q8N8E1 139 aa5.46□□□□□ -1.54
VMP1-204ENST00000587259 BAALCQ8WXS3 180 aa5.46□□□□□ -1.54
VMP1-204ENST00000587259 ZNF479Q96JC4 524 aa5.46□□□□□ -1.54
VMP1-204ENST00000587259 TIMM21Q9BVV7 248 aa5.46□□□□□ -1.54
VMP1-204ENST00000587259 GTSF1LQ9H1H1 148 aa5.46□□□□□ -1.54
VMP1-204ENST00000587259 CHTOPQ9Y3Y2 248 aaKnown RBP5.46□□□□□ -1.54
VMP1-204ENST00000587259 LINC00587B1AMM8 73 aa5.45□□□□□ -1.54
VMP1-204ENST00000587259 COX8AP10176 69 aa5.45□□□□□ -1.54
VMP1-204ENST00000587259 NEGR1Q7Z3B1 354 aa5.45□□□□□ -1.54
VMP1-204ENST00000587259 SLC25A29Q8N8R3 303 aa5.45□□□□□ -1.54
VMP1-204ENST00000587259 C2orf88Q9BSF0 95 aa5.45□□□□□ -1.54
VMP1-204ENST00000587259 MRPS16Q9Y3D3 137 aaKnown RBP5.45□□□□□ -1.54
VMP1-204ENST00000587259 hDV102S1A0JD36 115 aa5.44□□□□□ -1.54
VMP1-204ENST00000587259 C16orf90A8MZG2 172 aa5.44□□□□□ -1.54
VMP1-204ENST00000587259 DLEU1O43261 78 aa5.44□□□□□ -1.54
VMP1-204ENST00000587259 SPART-AS1P0CW21 52 aa5.44□□□□□ -1.54
VMP1-204ENST00000587259 UBE2D3P61077 147 aa5.44□□□□□ -1.54
VMP1-204ENST00000587259 UBE2D2P62837 147 aa5.44□□□□□ -1.54
VMP1-204ENST00000587259 FAM222AQ5U5X8 452 aa5.44□□□□□ -1.54
VMP1-204ENST00000587259 SH2D6Q7Z4S9 175 aa5.44□□□□□ -1.54
VMP1-204ENST00000587259 ZNRF2Q8NHG8 242 aa5.44□□□□□ -1.54
VMP1-204ENST00000587259 VCX2Q9H322 139 aa5.44□□□□□ -1.54
VMP1-204ENST00000587259 MRPL35Q9NZE8 188 aaKnown RBP5.44□□□□□ -1.54
VMP1-204ENST00000587259 DKK2Q9UBU2 259 aa5.44□□□□□ -1.54
VMP1-204ENST00000587259 PRO0255Q9UI72 69 aa5.44□□□□□ -1.54
VMP1-204ENST00000587259 CSDC2Q9Y534 153 aaKnown RBP5.44□□□□□ -1.54
VMP1-204ENST00000587259 TRBV25-1A0A075B6N4 114 aa5.43□□□□□ -1.54
VMP1-204ENST00000587259 M0R143 59 aa5.43□□□□□ -1.54
VMP1-204ENST00000587259 UBE2L6O14933 153 aa5.43□□□□□ -1.54
VMP1-204ENST00000587259 SIVA1O15304 175 aa5.43□□□□□ -1.54
VMP1-204ENST00000587259 ZNF25P17030 456 aaPredicted RBP5.43□□□□□ -1.54
VMP1-204ENST00000587259 DAD1P61803 113 aa5.43□□□□□ -1.54
VMP1-204ENST00000587259 RPL39P62891 51 aaKnown RBP5.43□□□□□ -1.54
VMP1-204ENST00000587259 SEC11AP67812 179 aa5.43□□□□□ -1.54
VMP1-204ENST00000587259 MRPS36P82909 103 aaKnown RBP5.43□□□□□ -1.54
VMP1-204ENST00000587259 C1orf134Q5TEV5 83 aa5.43□□□□□ -1.54
VMP1-204ENST00000587259 ZC2HC1BQ5TFG8 222 aa5.43□□□□□ -1.54
VMP1-204ENST00000587259 DGAT2L7PQ6IED9 249 aa5.43□□□□□ -1.54
VMP1-204ENST00000587259 Q6ZSN1 163 aa5.43□□□□□ -1.54
VMP1-204ENST00000587259 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
VMP1-204ENST00000587259 ATP5G1P05496 136 aa5.42□□□□□ -1.54
VMP1-204ENST00000587259 DEFB130BP0DP73 79 aa5.42□□□□□ -1.54
VMP1-204ENST00000587259 DEFB130AP0DP74 79 aa5.42□□□□□ -1.54
VMP1-204ENST00000587259 FHL2Q14192 279 aa5.42□□□□□ -1.54
VMP1-204ENST00000587259 MAJINQ3KP22 176 aa5.42□□□□□ -1.54
VMP1-204ENST00000587259 NFE4Q86UQ8 179 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms