RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 GAGE2BQ13066 116 aa8.57□□□□□ -1.04
CXXC1-208ENST00000587170 PRR26Q8N8Z3 221 aa8.57□□□□□ -1.04
CXXC1-208ENST00000587170 NUDT10Q8NFP7 164 aa8.57□□□□□ -1.04
CXXC1-208ENST00000587170 NUDT11Q96G61 164 aa8.57□□□□□ -1.04
CXXC1-208ENST00000587170 CDC42SE2Q9NRR3 84 aa8.57□□□□□ -1.04
CXXC1-208ENST00000587170 IGLV4-69A0A075B6H9 119 aa8.56□□□□□ -1.04
CXXC1-208ENST00000587170 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.56□□□□□ -1.04
CXXC1-208ENST00000587170 BCL2P10415 239 aa8.56□□□□□ -1.04
CXXC1-208ENST00000587170 EIF5AP63241 154 aaKnown RBP8.56□□□□□ -1.04
CXXC1-208ENST00000587170 SS18Q15532 418 aa8.56□□□□□ -1.04
CXXC1-208ENST00000587170 C9orf116Q5BN46 136 aaPredicted RBP8.56□□□□□ -1.04
CXXC1-208ENST00000587170 EIF5AL1Q6IS14 154 aaKnown RBP8.56□□□□□ -1.04
CXXC1-208ENST00000587170 DIRC1Q969H9 104 aa8.56□□□□□ -1.04
CXXC1-208ENST00000587170 MRAP2Q96G30 205 aa8.56□□□□□ -1.04
CXXC1-208ENST00000587170 RPP21Q9H633 154 aaKnown RBP8.56□□□□□ -1.04
CXXC1-208ENST00000587170 HMSDA8MTL9 139 aa8.55□□□□□ -1.04
CXXC1-208ENST00000587170 SMLR1H3BR10 107 aa8.55□□□□□ -1.04
CXXC1-208ENST00000587170 C1orf137Q5JT78 98 aa8.55□□□□□ -1.04
CXXC1-208ENST00000587170 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
CXXC1-208ENST00000587170 H0Y9J4 135 aa8.54□□□□□ -1.04
CXXC1-208ENST00000587170 IGLV7-43P04211 117 aa8.54□□□□□ -1.04
CXXC1-208ENST00000587170 FOXA3P55318 350 aaPredicted RBP8.54□□□□□ -1.04
CXXC1-208ENST00000587170 IGLV1-50A0A075B6I6 118 aa8.53□□□□□ -1.04
CXXC1-208ENST00000587170 A0A0U1RQV1 116 aa8.53□□□□□ -1.04
CXXC1-208ENST00000587170 KANTRA0A1W2PQU2 76 aa8.53□□□□□ -1.04
CXXC1-208ENST00000587170 COX7A2LO14548 114 aa8.53□□□□□ -1.04
CXXC1-208ENST00000587170 KRTAP1-4P0C5Y4 121 aa8.53□□□□□ -1.04
CXXC1-208ENST00000587170 PMCHP20382 165 aa8.53□□□□□ -1.04
CXXC1-208ENST00000587170 PHF5AQ7RTV0 110 aaKnown RBP8.53□□□□□ -1.04
CXXC1-208ENST00000587170 SMIM15Q7Z3B0 74 aa8.53□□□□□ -1.04
CXXC1-208ENST00000587170 TMEM242Q9NWH2 141 aa8.53□□□□□ -1.04
CXXC1-208ENST00000587170 TRBV27A0A0K0K1C4 114 aa8.52□□□□□ -1.05
CXXC1-208ENST00000587170 C1orf196B1AJZ1 125 aa8.52□□□□□ -1.05
CXXC1-208ENST00000587170 K7EN84 100 aa8.52□□□□□ -1.05
CXXC1-208ENST00000587170 RNF151Q2KHN1 245 aa8.52□□□□□ -1.05
CXXC1-208ENST00000587170 CAMK2N2Q96S95 79 aa8.52□□□□□ -1.05
CXXC1-208ENST00000587170 RNASE7Q9H1E1 156 aaKnown RBP8.52□□□□□ -1.05
CXXC1-208ENST00000587170 C7orf77A4D0Y5 90 aa8.51□□□□□ -1.05
CXXC1-208ENST00000587170 MALP21145 153 aa8.51□□□□□ -1.05
CXXC1-208ENST00000587170 POLR2KP53803 58 aaKnown RBP8.51□□□□□ -1.05
CXXC1-208ENST00000587170 LCE2AQ5TA79 106 aaPredicted RBP8.51□□□□□ -1.05
CXXC1-208ENST00000587170 MED9Q9NWA0 146 aa8.51□□□□□ -1.05
CXXC1-208ENST00000587170 CSDC2Q9Y534 153 aaKnown RBP8.51□□□□□ -1.05
CXXC1-208ENST00000587170 TEX46H3BTG2 121 aa8.5□□□□□ -1.05
CXXC1-208ENST00000587170 RPL18AQ02543 176 aaKnown RBP8.5□□□□□ -1.05
CXXC1-208ENST00000587170 KRTAP11-1Q8IUC1 163 aa8.5□□□□□ -1.05
CXXC1-208ENST00000587170 TSKUQ8WUA8 353 aa8.5□□□□□ -1.05
CXXC1-208ENST00000587170 ST20Q9HBF5 79 aa8.5□□□□□ -1.05
CXXC1-208ENST00000587170 OR10D4PQ8NGN7 298 aa8.48□□□□□ -1.05
CXXC1-208ENST00000587170 OCC1Q8TAD7 63 aa8.48□□□□□ -1.05
CXXC1-208ENST00000587170 UBE2D4Q9Y2X8 147 aa8.48□□□□□ -1.05
CXXC1-208ENST00000587170 SPAG11BQ08648 103 aa8.47□□□□□ -1.05
CXXC1-208ENST00000587170 MRPL35Q9NZE8 188 aaKnown RBP8.47□□□□□ -1.05
CXXC1-208ENST00000587170 F8WDY8 70 aa8.46□□□□□ -1.06
CXXC1-208ENST00000587170 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.06
CXXC1-208ENST00000587170 TAGLN2P37802 199 aaKnown RBP8.46□□□□□ -1.06
CXXC1-208ENST00000587170 RPL13AP40429 203 aaKnown RBP8.46□□□□□ -1.06
CXXC1-208ENST00000587170 CT83Q5H943 113 aa8.46□□□□□ -1.06
CXXC1-208ENST00000587170 FAM231DQ6ZW35 169 aa8.46□□□□□ -1.06
CXXC1-208ENST00000587170 OPRPNQ99935 248 aaPredicted RBP8.46□□□□□ -1.06
CXXC1-208ENST00000587170 TMEM191AQ9H0A3 160 aa8.46□□□□□ -1.06
CXXC1-208ENST00000587170 A0A087WZ39 114 aa8.45□□□□□ -1.06
CXXC1-208ENST00000587170 FAM168BA1KXE4 195 aa8.45□□□□□ -1.06
CXXC1-208ENST00000587170 A8MWL6 223 aa8.45□□□□□ -1.06
CXXC1-208ENST00000587170 SMAGPQ0VAQ4 97 aa8.45□□□□□ -1.06
CXXC1-208ENST00000587170 PRR4Q16378 134 aa8.45□□□□□ -1.06
CXXC1-208ENST00000587170 TIMM21Q9BVV7 248 aa8.45□□□□□ -1.06
CXXC1-208ENST00000587170 BATF3Q9NR55 127 aa8.45□□□□□ -1.06
CXXC1-208ENST00000587170 RGS21Q2M5E4 152 aa8.44□□□□□ -1.06
CXXC1-208ENST00000587170 RNASE13Q5GAN3 156 aaKnown RBP8.44□□□□□ -1.06
CXXC1-208ENST00000587170 C5orf38Q86SI9 138 aa8.44□□□□□ -1.06
CXXC1-208ENST00000587170 KRTAP7-1Q8IUC3 87 aa8.44□□□□□ -1.06
CXXC1-208ENST00000587170 IMMP2LQ96T52 175 aa8.44□□□□□ -1.06
CXXC1-208ENST00000587170 TRAV13-1A0A0B4J241 112 aa8.43□□□□□ -1.06
CXXC1-208ENST00000587170 KRTAP9-6A0A140TA67 174 aa8.43□□□□□ -1.06
CXXC1-208ENST00000587170 GATCO43716 136 aaKnown RBP8.43□□□□□ -1.06
CXXC1-208ENST00000587170 RAB4AP20338 218 aa8.43□□□□□ -1.06
CXXC1-208ENST00000587170 Q6ZUT4 128 aa8.43□□□□□ -1.06
CXXC1-208ENST00000587170 IGHV3OR16-9A0A0B4J2B5 98 aa8.42□□□□□ -1.06
CXXC1-208ENST00000587170 A0A1B0GUT8 65 aa8.42□□□□□ -1.06
CXXC1-208ENST00000587170 VCYO14598 125 aa8.42□□□□□ -1.06
CXXC1-208ENST00000587170 UBE2D1P51668 147 aa8.42□□□□□ -1.06
CXXC1-208ENST00000587170 CARHSP1Q9Y2V2 147 aaKnown RBP8.42□□□□□ -1.06
CXXC1-208ENST00000587170 NDUFA1O15239 70 aa8.41□□□□□ -1.06
CXXC1-208ENST00000587170 FCER1GP30273 86 aa8.41□□□□□ -1.06
CXXC1-208ENST00000587170 FAM19A5Q7Z5A7 132 aaPredicted RBP8.41□□□□□ -1.06
CXXC1-208ENST00000587170 NRACQ8N912 160 aa8.41□□□□□ -1.06
CXXC1-208ENST00000587170 ORAOV1Q8WV07 137 aa8.41□□□□□ -1.06
CXXC1-208ENST00000587170 FAM104AQ969W3 186 aa8.41□□□□□ -1.06
CXXC1-208ENST00000587170 SMDT1Q9H4I9 107 aa8.41□□□□□ -1.06
CXXC1-208ENST00000587170 HIGD1CA8MV81 97 aa8.4□□□□□ -1.06
CXXC1-208ENST00000587170 TMEM250H0YL14 139 aa8.4□□□□□ -1.06
CXXC1-208ENST00000587170 SUMO2P61956 95 aaKnown RBP8.4□□□□□ -1.06
CXXC1-208ENST00000587170 C10orf25Q5T742 122 aa8.4□□□□□ -1.06
CXXC1-208ENST00000587170 AMN1Q8IY45 258 aa8.4□□□□□ -1.06
CXXC1-208ENST00000587170 BORCS7Q96B45 105 aa8.4□□□□□ -1.06
CXXC1-208ENST00000587170 C6orf48Q9UBA6 75 aa8.4□□□□□ -1.06
CXXC1-208ENST00000587170 MUC17Q685J3 4493 aa8.39□□□□□ -1.07
CXXC1-208ENST00000587170 M0QXV9 152 aa8.39□□□□□ -1.07
CXXC1-208ENST00000587170 PPP1R17O96001 155 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms