RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 MRAP2Q96G30 205 aa12.07□□□□□ -0.48
TRAF4-216ENST00000586813 TMEM242Q9NWH2 141 aa12.07□□□□□ -0.48
TRAF4-216ENST00000586813 RNF213Q63HN8 5207 aa12.06□□□□□ -0.48
TRAF4-216ENST00000586813 TMEM250H0YL14 139 aa12.06□□□□□ -0.48
TRAF4-216ENST00000586813 CT83Q5H943 113 aa12.06□□□□□ -0.48
TRAF4-216ENST00000586813 ST20Q9HBF5 79 aa12.06□□□□□ -0.48
TRAF4-216ENST00000586813 A0A0J9YXV3 536 aa12.05□□□□□ -0.48
TRAF4-216ENST00000586813 ODF1Q14990 250 aa12.05□□□□□ -0.48
TRAF4-216ENST00000586813 SPINK6Q6UWN8 80 aa12.05□□□□□ -0.48
TRAF4-216ENST00000586813 SS18Q15532 418 aa12.04□□□□□ -0.48
TRAF4-216ENST00000586813 CD164L2Q6UWJ8 174 aa12.04□□□□□ -0.48
TRAF4-216ENST00000586813 MRPL52Q86TS9 123 aaKnown RBP12.04□□□□□ -0.48
TRAF4-216ENST00000586813 BORCS7Q96B45 105 aa12.04□□□□□ -0.48
TRAF4-216ENST00000586813 FAM210AQ96ND0 272 aa12.04□□□□□ -0.48
TRAF4-216ENST00000586813 CDC42SE2Q9NRR3 84 aa12.04□□□□□ -0.48
TRAF4-216ENST00000586813 A0A1B0GVG6 124 aa12.03□□□□□ -0.48
TRAF4-216ENST00000586813 ZNF561-AS1K7EIQ3 104 aa12.03□□□□□ -0.48
TRAF4-216ENST00000586813 SYCNQ0VAF6 134 aa12.03□□□□□ -0.48
TRAF4-216ENST00000586813 POLR2KP53803 58 aaKnown RBP12.02□□□□□ -0.49
TRAF4-216ENST00000586813 REG3GQ6UW15 175 aa12.02□□□□□ -0.49
TRAF4-216ENST00000586813 ZNF664Q8N3J9 261 aa12.02□□□□□ -0.49
TRAF4-216ENST00000586813 TMEM191AQ9H0A3 160 aa12.02□□□□□ -0.49
TRAF4-216ENST00000586813 TRBV27A0A0K0K1C4 114 aa12.01□□□□□ -0.49
TRAF4-216ENST00000586813 C7orf77A4D0Y5 90 aa12.01□□□□□ -0.49
TRAF4-216ENST00000586813 CAMPP49913 170 aa12.01□□□□□ -0.49
TRAF4-216ENST00000586813 CEBPGP53567 150 aa12.01□□□□□ -0.49
TRAF4-216ENST00000586813 Q6ZRP5 223 aa12.01□□□□□ -0.49
TRAF4-216ENST00000586813 A0A1B0GUT8 65 aa12□□□□□ -0.49
TRAF4-216ENST00000586813 HIGD1CA8MV81 97 aa12□□□□□ -0.49
TRAF4-216ENST00000586813 KRTAP10-8P60410 259 aa12□□□□□ -0.49
TRAF4-216ENST00000586813 RAB4AP20338 218 aa11.99□□□□□ -0.49
TRAF4-216ENST00000586813 PTTG1IPP53801 180 aa11.99□□□□□ -0.49
TRAF4-216ENST00000586813 SRSF9Q13242 221 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■■□□□ 13.7
TRAF4-216ENST00000586813 AMN1Q8IY45 258 aa11.99□□□□□ -0.49
TRAF4-216ENST00000586813 TSKUQ8WUA8 353 aa11.99□□□□□ -0.49
TRAF4-216ENST00000586813 BLOC1S1P78537 153 aa11.98□□□□□ -0.49
TRAF4-216ENST00000586813 ALKAL2Q6UX46 152 aa11.98□□□□□ -0.49
TRAF4-216ENST00000586813 ISOC2Q96AB3 205 aa11.98□□□□□ -0.49
TRAF4-216ENST00000586813 IGLV4-69A0A075B6H9 119 aa11.97□□□□□ -0.49
TRAF4-216ENST00000586813 LOC107984640A0A0U1RRK4 108 aa11.97□□□□□ -0.49
TRAF4-216ENST00000586813 MALP21145 153 aa11.97□□□□□ -0.49
TRAF4-216ENST00000586813 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
TRAF4-216ENST00000586813 LINC01551Q86U37 167 aa11.97□□□□□ -0.49
TRAF4-216ENST00000586813 SMIM7Q9BQ49 75 aa11.97□□□□□ -0.49
TRAF4-216ENST00000586813 C1orf196B1AJZ1 125 aa11.96□□□□□ -0.49
TRAF4-216ENST00000586813 COX7A2LO14548 114 aa11.96□□□□□ -0.49
TRAF4-216ENST00000586813 SMKR1H3BMG3 65 aa11.95□□□□□ -0.5
TRAF4-216ENST00000586813 VCYO14598 125 aa11.95□□□□□ -0.5
TRAF4-216ENST00000586813 FCER1GP30273 86 aa11.95□□□□□ -0.5
TRAF4-216ENST00000586813 NUP35Q8NFH5 326 aa11.95□□□□□ -0.5
TRAF4-216ENST00000586813 UBE2D4Q9Y2X8 147 aa11.95□□□□□ -0.5
TRAF4-216ENST00000586813 CSDC2Q9Y534 153 aaKnown RBP11.95□□□□□ -0.5
TRAF4-216ENST00000586813 RNASE13Q5GAN3 156 aaKnown RBP11.94□□□□□ -0.5
TRAF4-216ENST00000586813 CAMK2N2Q96S95 79 aa11.94□□□□□ -0.5
TRAF4-216ENST00000586813 OSTCQ9NRP0 149 aa11.94□□□□□ -0.5
TRAF4-216ENST00000586813 A0A1W2PNN7 141 aa11.93□□□□□ -0.5
TRAF4-216ENST00000586813 APOMO95445 188 aa11.93□□□□□ -0.5
TRAF4-216ENST00000586813 SUMO2P61956 95 aaKnown RBP11.93□□□□□ -0.5
TRAF4-216ENST00000586813 NRACQ8N912 160 aa11.93□□□□□ -0.5
TRAF4-216ENST00000586813 EIF5A2Q9GZV4 153 aaKnown RBP11.93□□□□□ -0.5
TRAF4-216ENST00000586813 TRAV13-1A0A0B4J241 112 aa11.92□□□□□ -0.5
TRAF4-216ENST00000586813 ZNF727A8MUV8 499 aa11.92□□□□□ -0.5
TRAF4-216ENST00000586813 PPP1R17O96001 155 aa11.92□□□□□ -0.5
TRAF4-216ENST00000586813 SMAGPQ0VAQ4 97 aa11.92□□□□□ -0.5
TRAF4-216ENST00000586813 RIGQ13278 110 aa11.92□□□□□ -0.5
TRAF4-216ENST00000586813 KIR2DL4Q99706 377 aa11.92□□□□□ -0.5
TRAF4-216ENST00000586813 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-216ENST00000586813 Q6ZUT4 128 aa11.91□□□□□ -0.5
TRAF4-216ENST00000586813 C2orf48Q96LS8 159 aa11.91□□□□□ -0.5
TRAF4-216ENST00000586813 V9GYV3 84 aa11.91□□□□□ -0.5
TRAF4-216ENST00000586813 C9orf116Q5BN46 136 aaPredicted RBP11.9□□□□□ -0.5
TRAF4-216ENST00000586813 C5orf38Q86SI9 138 aa11.9□□□□□ -0.5
TRAF4-216ENST00000586813 RPL18AQ02543 176 aaKnown RBP11.89□□□□□ -0.51
TRAF4-216ENST00000586813 PSORS1C2Q9UIG4 136 aa11.89□□□□□ -0.51
TRAF4-216ENST00000586813 PPP1R2P9O14990 202 aa11.88□□□□□ -0.51
TRAF4-216ENST00000586813 SPAG11BQ08648 103 aa11.88□□□□□ -0.51
TRAF4-216ENST00000586813 TIMM21Q9BVV7 248 aa11.88□□□□□ -0.51
TRAF4-216ENST00000586813 MT-ND6P03923 174 aa11.87□□□□□ -0.51
TRAF4-216ENST00000586813 SRP19P09132 144 aaKnown RBP11.87□□□□□ -0.51
TRAF4-216ENST00000586813 TMEM18Q96B42 140 aa11.87□□□□□ -0.51
TRAF4-216ENST00000586813 MRPL51Q4U2R6 128 aaKnown RBP11.86□□□□□ -0.51
TRAF4-216ENST00000586813 OPRPNQ99935 248 aaPredicted RBP11.86□□□□□ -0.51
TRAF4-216ENST00000586813 NAT8BQ9UHF3 227 aa11.86□□□□□ -0.51
TRAF4-216ENST00000586813 FAM104BQ5XKR9 115 aa11.85□□□□□ -0.51
TRAF4-216ENST00000586813 PHF5AQ7RTV0 110 aaKnown RBP11.85□□□□□ -0.51
TRAF4-216ENST00000586813 OR10D4PQ8NGN7 298 aa11.85□□□□□ -0.51
TRAF4-216ENST00000586813 RNF151Q2KHN1 245 aa11.84□□□□□ -0.51
TRAF4-216ENST00000586813 C1orf137Q5JT78 98 aa11.84□□□□□ -0.51
TRAF4-216ENST00000586813 C20orf78Q9BR46 151 aa11.84□□□□□ -0.51
TRAF4-216ENST00000586813 TRBV24-1A0A075B6N3 115 aa11.82□□□□□ -0.52
TRAF4-216ENST00000586813 LINC00862A6NCI5 91 aa11.82□□□□□ -0.52
TRAF4-216ENST00000586813 RPL23P62829 140 aaKnown RBP11.82□□□□□ -0.52
TRAF4-216ENST00000586813 RPL39P62891 51 aaKnown RBP11.82□□□□□ -0.52
TRAF4-216ENST00000586813 RPL32P62910 135 aaKnown RBP11.82□□□□□ -0.52
TRAF4-216ENST00000586813 FAM74A3Q4VXF1 159 aa11.82□□□□□ -0.52
TRAF4-216ENST00000586813 ORAOV1Q8WV07 137 aa11.82□□□□□ -0.52
TRAF4-216ENST00000586813 MRPL35Q9NZE8 188 aaKnown RBP11.82□□□□□ -0.52
TRAF4-216ENST00000586813 TMEM241Q24JQ0 296 aa11.81□□□□□ -0.52
TRAF4-216ENST00000586813 FAM104AQ969W3 186 aa11.81□□□□□ -0.52
TRAF4-216ENST00000586813 LPAP08519 4548 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms